Wall clock time and date at job start Tue Mar 31 2020 10:13:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53002 * 109.47031 * 2 1 4 4 C 1.53000 * 109.46974 * 240.00187 * 2 1 3 5 5 F 1.39900 * 109.47321 * 60.00487 * 4 2 1 6 6 N 1.46495 * 109.47421 * 120.00406 * 2 1 3 7 7 C 1.34785 * 119.99659 * 299.99977 * 6 2 1 8 8 O 1.21585 * 120.00076 * 0.02562 * 7 6 2 9 9 N 1.34778 * 119.99930 * 180.27306 * 7 6 2 10 10 C 1.39270 * 119.99699 * 175.47431 * 9 7 6 11 11 C 1.39461 * 119.84028 * 34.73971 * 10 9 7 12 12 C 1.36382 * 120.17775 * 179.72026 * 11 10 9 13 13 C 1.40888 * 119.84842 * 0.54669 * 12 11 10 14 14 C 1.41158 * 120.15859 * 179.74636 * 13 12 11 15 15 H 1.07993 * 119.99639 * 34.75245 * 14 13 12 16 16 C 1.39887 * 119.99969 * 214.75195 * 14 13 12 17 17 N 1.30884 * 120.00114 * 355.59480 * 16 14 13 18 18 Si 1.86792 * 119.99892 * 175.59070 * 16 14 13 19 19 H 1.48500 * 109.47493 * 0.02562 * 18 16 14 20 20 H 1.48500 * 109.47026 * 120.00294 * 18 16 14 21 21 H 1.48502 * 109.47161 * 240.00139 * 18 16 14 22 22 C 1.40844 * 119.68259 * 359.72662 * 13 12 11 23 23 C 1.36477 * 119.82012 * 359.97438 * 22 13 12 24 24 Cl 1.73602 * 119.92626 * 179.97438 * 23 22 13 25 25 H 1.08989 * 109.46901 * 299.99855 * 1 2 3 26 26 H 1.08999 * 109.46674 * 60.00047 * 1 2 3 27 27 H 1.08993 * 109.47008 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.46953 * 180.02562 * 3 2 1 29 29 H 1.09003 * 109.47362 * 300.00053 * 3 2 1 30 30 H 1.09003 * 109.47081 * 60.00234 * 3 2 1 31 31 H 1.09003 * 109.47035 * 179.97438 * 4 2 1 32 32 H 1.08993 * 109.47211 * 299.99824 * 4 2 1 33 33 H 0.96991 * 120.00651 * 119.99903 * 6 2 1 34 34 H 0.97000 * 119.99644 * 355.47969 * 9 7 6 35 35 H 1.08000 * 119.91496 * 359.97059 * 11 10 9 36 36 H 1.07998 * 120.07461 * 180.25187 * 12 11 10 37 37 H 0.97000 * 120.00203 * 179.97438 * 17 16 14 38 38 H 1.08005 * 120.08746 * 180.02562 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 9 1.5738 -0.0616 -2.3915 6 7 2.0184 -0.6907 1.1961 7 6 1.6928 -0.2302 2.4203 8 8 0.9934 0.7581 2.5319 9 7 2.1466 -0.8624 3.5207 10 6 1.8894 -0.3337 4.7832 11 6 0.6836 0.3228 5.0282 12 6 0.4222 0.8381 6.2635 13 6 1.3785 0.7161 7.2909 14 6 1.1170 1.2517 8.5705 15 1 0.1120 1.2401 8.9655 16 6 2.1596 1.7973 9.3268 17 7 3.3904 1.7339 8.8862 18 14 1.7953 2.6164 10.9656 19 1 0.3362 2.5568 11.2352 20 1 2.5272 1.9084 12.0464 21 1 2.2328 4.0347 10.9182 22 6 2.5966 0.0569 7.0352 23 6 2.8419 -0.4592 5.7958 24 17 4.3427 -1.2717 5.4774 25 1 -0.3633 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 3.1300 1.4425 -0.0005 29 1 1.6767 1.9564 -0.8900 30 1 1.6767 1.9563 0.8900 31 1 3.1300 -0.7208 -1.2495 32 1 1.6767 -1.7488 -1.2493 33 1 2.5761 -1.4792 1.1071 34 1 2.6525 -1.6854 3.4332 35 1 -0.0468 0.4200 4.2386 36 1 -0.5138 1.3426 6.4525 37 1 4.1134 2.1126 9.4105 38 1 3.3342 -0.0407 7.8181 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000455740158.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:13:47 Heat of formation + Delta-G solvation = -70.336466 kcal Electronic energy + Delta-G solvation = -23717.184075 eV Core-core repulsion = 19920.518228 eV Total energy + Delta-G solvation = -3796.665847 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.094 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -47.94175 -40.27736 -38.04374 -36.27684 -35.52316 -34.35143 -33.16394 -31.39257 -29.43594 -28.75016 -27.29998 -27.13379 -25.08338 -22.21835 -21.28286 -20.39693 -19.71481 -18.21395 -17.44580 -17.10043 -16.18972 -16.15848 -15.45959 -15.20018 -15.03831 -14.48971 -14.25645 -13.97160 -13.62074 -13.27250 -13.00095 -12.87491 -12.56974 -12.37502 -12.10933 -11.88134 -11.65873 -11.46387 -11.39456 -11.18983 -11.10713 -10.97996 -10.85987 -10.57315 -10.31887 -9.97982 -9.75667 -9.52319 -9.27092 -9.03182 -8.97391 -7.54658 -6.99267 -6.71435 -4.46092 2.43765 2.79251 2.86740 3.04810 3.07806 3.11906 3.18838 3.60176 3.91803 4.19753 4.45342 4.46170 4.57530 4.67778 4.89719 5.22792 5.31016 5.44513 5.67591 5.72382 5.82643 5.88538 6.18888 6.29981 6.38606 6.48250 6.59954 6.68146 6.85789 6.97226 7.09524 7.23315 7.34659 7.68247 7.70496 7.92343 8.11088 8.34979 8.44213 8.75354 8.80487 8.98892 10.19059 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.024281 B = 0.003237 C = 0.003006 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1152.898554 B = 8647.151129 C = 9311.915452 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.165 3.835 3 C -0.167 4.167 4 C 0.063 3.937 5 F -0.205 7.205 6 N -0.745 5.745 7 C 0.704 3.296 8 O -0.570 6.570 9 N -0.665 5.665 10 C 0.032 3.968 11 C -0.075 4.075 12 C -0.200 4.200 13 C 0.107 3.893 14 C -0.456 4.456 15 H 0.081 0.919 16 C 0.069 3.931 17 N -0.805 5.805 18 Si 0.918 3.082 19 H -0.261 1.261 20 H -0.274 1.274 21 H -0.274 1.274 22 C -0.135 4.135 23 C -0.024 4.024 24 Cl -0.121 7.121 25 H 0.089 0.911 26 H 0.065 0.935 27 H 0.053 0.947 28 H 0.053 0.947 29 H 0.065 0.935 30 H 0.089 0.911 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.392 0.608 34 H 0.394 0.606 35 H 0.120 0.880 36 H 0.103 0.897 37 H 0.280 0.720 38 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.323 -6.205 -13.372 14.745 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.224 4.224 2 C 0.078 3.922 3 C -0.225 4.225 4 C 0.008 3.992 5 F -0.186 7.186 6 N -0.402 5.402 7 C 0.405 3.595 8 O -0.447 6.447 9 N -0.311 5.311 10 C -0.062 4.062 11 C -0.095 4.095 12 C -0.221 4.221 13 C 0.103 3.897 14 C -0.486 4.486 15 H 0.099 0.901 16 C -0.147 4.147 17 N -0.432 5.432 18 Si 0.742 3.258 19 H -0.185 1.185 20 H -0.199 1.199 21 H -0.199 1.199 22 C -0.156 4.156 23 C -0.052 4.052 24 Cl -0.093 7.093 25 H 0.107 0.893 26 H 0.084 0.916 27 H 0.072 0.928 28 H 0.073 0.927 29 H 0.084 0.916 30 H 0.108 0.892 31 H 0.098 0.902 32 H 0.097 0.903 33 H 0.225 0.775 34 H 0.228 0.772 35 H 0.138 0.862 36 H 0.121 0.879 37 H 0.091 0.909 38 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 0.044 -5.263 -13.276 14.281 hybrid contribution 0.784 -0.411 0.486 1.010 sum 0.828 -5.674 -12.790 14.016 Atomic orbital electron populations 1.22252 0.93456 1.02354 1.04317 1.20574 0.95407 0.93207 0.83028 1.22259 1.00862 0.95029 1.04306 1.22093 0.99889 0.95762 0.81491 1.92770 1.90774 1.83369 1.51729 1.45043 1.57543 1.33487 1.04140 1.15839 0.80983 0.82826 0.79872 1.90845 1.41607 1.27106 1.85096 1.42052 1.58276 1.27018 1.03760 1.16685 0.95468 1.11196 0.82848 1.20416 0.94211 0.98046 0.96853 1.20905 1.01519 1.06936 0.92700 1.17605 0.90405 0.88704 0.92949 1.19528 0.95553 1.33805 0.99745 0.90107 1.25920 0.94463 0.95124 0.99219 1.69748 1.00169 1.36070 1.37171 0.86102 0.79777 0.79134 0.80756 1.18488 1.19912 1.19892 1.21190 1.00770 0.99236 0.94409 1.20415 0.85096 1.03264 0.96449 1.98247 1.35571 1.79400 1.96090 0.89261 0.91620 0.92799 0.92746 0.91646 0.89197 0.90235 0.90266 0.77466 0.77202 0.86194 0.87935 0.90879 0.83863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -1.98 8.28 37.16 0.31 -1.67 16 2 C 0.17 1.84 0.91 -131.82 -0.12 1.72 16 3 C -0.17 -2.10 8.28 37.16 0.31 -1.79 16 4 C 0.06 0.52 6.48 37.16 0.24 0.76 16 5 F -0.21 -2.13 16.32 2.25 0.04 -2.09 16 6 N -0.74 -8.77 5.11 -52.41 -0.27 -9.03 16 7 C 0.70 11.66 7.82 -86.91 -0.68 10.98 16 8 O -0.57 -11.37 9.93 5.29 0.05 -11.32 16 9 N -0.66 -11.39 5.02 -14.07 -0.07 -11.46 16 10 C 0.03 0.69 6.32 -83.52 -0.53 0.16 16 11 C -0.07 -1.69 8.61 -39.79 -0.34 -2.04 16 12 C -0.20 -4.79 9.74 -39.25 -0.38 -5.17 16 13 C 0.11 2.73 5.55 -106.80 -0.59 2.13 16 14 C -0.46 -11.64 9.02 -37.86 -0.34 -11.98 16 15 H 0.08 1.97 7.85 -52.49 -0.41 1.56 16 16 C 0.07 1.68 5.42 -17.34 -0.09 1.59 16 17 N -0.81 -20.36 10.59 55.54 0.59 -19.77 16 18 Si 0.92 18.42 29.56 -169.99 -5.03 13.40 16 19 H -0.26 -5.17 7.11 56.52 0.40 -4.77 16 20 H -0.27 -5.39 7.11 56.52 0.40 -4.99 16 21 H -0.27 -5.48 7.11 56.52 0.40 -5.08 16 22 C -0.14 -3.38 8.38 -39.23 -0.33 -3.71 16 23 C -0.02 -0.53 6.30 -39.72 -0.25 -0.78 16 24 Cl -0.12 -2.28 27.92 -51.86 -1.45 -3.73 16 25 H 0.09 1.33 6.16 -51.94 -0.32 1.01 16 26 H 0.06 0.72 7.80 -51.93 -0.41 0.32 16 27 H 0.05 0.58 8.14 -51.93 -0.42 0.16 16 28 H 0.05 0.65 8.14 -51.93 -0.42 0.22 16 29 H 0.06 0.75 7.80 -51.93 -0.41 0.34 16 30 H 0.09 1.43 6.16 -51.93 -0.32 1.11 16 31 H 0.08 0.53 8.14 -51.93 -0.42 0.11 16 32 H 0.08 0.50 8.14 -51.93 -0.42 0.08 16 33 H 0.39 3.35 8.49 -40.82 -0.35 3.00 16 34 H 0.39 5.64 8.07 -40.82 -0.33 5.31 16 35 H 0.12 2.66 6.18 -52.49 -0.32 2.34 16 36 H 0.10 2.30 8.06 -52.49 -0.42 1.88 16 37 H 0.28 6.50 8.30 -40.82 -0.34 6.16 16 38 H 0.14 3.75 6.13 -52.48 -0.32 3.43 16 LS Contribution 330.45 15.07 4.98 4.98 Total: -1.00 -28.24 330.45 -8.39 -36.63 By element: Atomic # 1 Polarization: 16.63 SS G_CDS: -4.43 Total: 12.19 kcal Atomic # 6 Polarization: -6.99 SS G_CDS: -2.80 Total: -9.80 kcal Atomic # 7 Polarization: -40.51 SS G_CDS: 0.25 Total: -40.26 kcal Atomic # 8 Polarization: -11.37 SS G_CDS: 0.05 Total: -11.32 kcal Atomic # 9 Polarization: -2.13 SS G_CDS: 0.04 Total: -2.09 kcal Atomic # 14 Polarization: 18.42 SS G_CDS: -5.03 Total: 13.40 kcal Atomic # 17 Polarization: -2.28 SS G_CDS: -1.45 Total: -3.73 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -28.24 -8.39 -36.63 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000455740158.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.711 kcal (2) G-P(sol) polarization free energy of solvation -28.236 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.947 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.390 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.625 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.336 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds