Wall clock time and date at job start Tue Mar 31 2020 10:40:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46902 * 1 3 3 C 1.46901 * 110.99700 * 2 1 4 4 C 1.50698 * 109.47365 * 293.95402 * 3 2 1 5 5 O 1.21278 * 120.00220 * 0.02562 * 4 3 2 6 6 N 1.34772 * 119.99653 * 180.02562 * 4 3 2 7 7 C 1.46505 * 119.99812 * 180.02562 * 6 4 3 8 8 C 1.50695 * 109.47169 * 180.02562 * 7 6 4 9 9 H 1.07996 * 120.00054 * 359.97438 * 8 7 6 10 10 C 1.37883 * 120.00013 * 180.02562 * 8 7 6 11 11 N 1.31514 * 120.00022 * 180.02562 * 10 8 7 12 12 Si 1.86794 * 119.99898 * 359.97438 * 10 8 7 13 13 H 1.48496 * 109.47290 * 90.00201 * 12 10 8 14 14 H 1.48505 * 109.47127 * 210.00568 * 12 10 8 15 15 H 1.48504 * 109.47214 * 330.00054 * 12 10 8 16 16 C 1.46894 * 110.99986 * 123.95774 * 2 1 3 17 17 C 1.50698 * 109.47175 * 66.04542 * 16 2 1 18 18 C 1.38264 * 119.97083 * 270.01653 * 17 16 2 19 19 C 1.38194 * 120.05301 * 180.02562 * 18 17 16 20 20 C 1.38447 * 119.98582 * 359.95563 * 19 18 17 21 21 F 1.35098 * 120.03314 * 180.29640 * 20 19 18 22 22 C 1.38555 * 119.93778 * 0.02622 * 20 19 18 23 23 Cl 1.73602 * 120.02332 * 180.02562 * 22 20 19 24 24 C 1.38218 * 119.96823 * 90.00112 * 17 16 2 25 25 H 1.09002 * 109.46609 * 296.04199 * 1 2 3 26 26 H 1.09001 * 109.47364 * 56.03976 * 1 2 3 27 27 H 1.09001 * 109.46905 * 176.04565 * 1 2 3 28 28 H 1.08993 * 109.47174 * 53.96274 * 3 2 1 29 29 H 1.09003 * 109.46634 * 173.95360 * 3 2 1 30 30 H 0.97001 * 120.00779 * 359.97438 * 6 4 3 31 31 H 1.09006 * 109.46983 * 299.99717 * 7 6 4 32 32 H 1.08998 * 109.47221 * 59.99810 * 7 6 4 33 33 H 0.97000 * 119.99944 * 179.97438 * 11 10 8 34 34 H 1.08999 * 109.47515 * 306.03925 * 16 2 1 35 35 H 1.09004 * 109.46810 * 186.04403 * 16 2 1 36 36 H 1.07999 * 119.97540 * 0.02562 * 18 17 16 37 37 H 1.08000 * 120.00964 * 180.02562 * 19 18 17 38 38 H 1.07992 * 119.99809 * 0.02562 * 24 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6369 2.0472 -1.2984 5 8 1.0047 1.4457 -2.1407 6 7 2.0188 3.3199 -1.5235 7 6 1.6698 3.9770 -2.7856 8 6 2.2110 5.3835 -2.7861 9 1 2.7596 5.7512 -1.9316 10 6 2.0048 6.2011 -3.8770 11 7 2.4775 7.4284 -3.8776 12 14 1.0552 5.5653 -5.3545 13 1 -0.3901 5.8557 -5.1765 14 1 1.5470 6.2357 -6.5849 15 1 1.2540 4.0987 -5.4769 16 6 1.9954 -0.7660 1.1375 17 6 1.6369 -2.2204 0.9727 18 6 0.4505 -2.7027 1.4938 19 6 0.1203 -4.0362 1.3442 20 6 0.9775 -4.8900 0.6710 21 9 0.6528 -6.1925 0.5189 22 6 2.1661 -4.4061 0.1487 23 17 3.2423 -5.4746 -0.6964 24 6 2.4942 -3.0710 0.3004 25 1 -0.3632 0.4512 0.9234 26 1 -0.3634 0.5741 -0.8524 27 1 -0.3633 -1.0252 -0.0709 28 1 1.5612 1.9273 0.8309 29 1 3.0797 1.3444 0.1083 30 1 2.5241 3.8011 -0.8498 31 1 2.1035 3.4210 -3.6168 32 1 0.5855 4.0045 -2.8932 33 1 2.3328 8.0035 -4.6452 34 1 1.5612 -0.3873 2.0628 35 1 3.0798 -0.6611 1.1755 36 1 -0.2186 -2.0368 2.0183 37 1 -0.8067 -4.4121 1.7512 38 1 3.4207 -2.6932 -0.1061 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000763822672.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:40:53 Heat of formation + Delta-G solvation = -53.923398 kcal Electronic energy + Delta-G solvation = -22717.274038 eV Core-core repulsion = 18921.319915 eV Total energy + Delta-G solvation = -3795.954123 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 314.094 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -49.27584 -40.00552 -39.09237 -37.09431 -36.43738 -34.27243 -32.39317 -31.81553 -31.30943 -28.98735 -27.35741 -26.85660 -23.70772 -23.27127 -21.93803 -21.20975 -19.87038 -18.13672 -17.41879 -17.06886 -16.46094 -16.22062 -15.96421 -15.76530 -15.56827 -14.76195 -14.57842 -14.46654 -14.21054 -14.14455 -13.70735 -13.46756 -13.22533 -12.70246 -12.65796 -12.38174 -12.29807 -12.01021 -11.84057 -11.64679 -11.52847 -11.37868 -11.23204 -11.01674 -10.76688 -9.98472 -9.52114 -9.37064 -9.21430 -9.00261 -8.79659 -8.38703 -8.14367 -6.23626 -4.26002 0.55627 0.70592 1.68058 2.95047 3.19921 3.25861 3.32358 3.41081 3.64835 3.71932 4.19781 4.22766 4.31790 4.32618 4.66646 4.72325 4.90520 5.09022 5.11669 5.20162 5.25866 5.30951 5.43897 5.47985 5.52784 5.53410 5.58022 5.69124 6.01259 6.15256 6.29216 6.71807 6.85310 6.91166 7.05449 7.21354 7.37438 8.11961 8.49342 8.73307 8.92819 9.36627 10.88283 Molecular weight = 314.09amu Principal moments of inertia in cm(-1) A = 0.024104 B = 0.002367 C = 0.002298 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1161.363790 B =11825.701294 C =12181.070444 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 N -0.518 5.518 3 C 0.035 3.965 4 C 0.500 3.500 5 O -0.540 6.540 6 N -0.707 5.707 7 C 0.222 3.778 8 C -0.544 4.544 9 H 0.079 0.921 10 C 0.077 3.923 11 N -0.892 5.892 12 Si 0.877 3.123 13 H -0.273 1.273 14 H -0.283 1.283 15 H -0.260 1.260 16 C 0.092 3.908 17 C -0.070 4.070 18 C -0.079 4.079 19 C -0.143 4.143 20 C 0.106 3.894 21 F -0.129 7.129 22 C -0.074 4.074 23 Cl -0.051 7.051 24 C -0.059 4.059 25 H 0.020 0.980 26 H 0.093 0.907 27 H 0.067 0.933 28 H 0.062 0.938 29 H 0.102 0.898 30 H 0.396 0.604 31 H 0.025 0.975 32 H 0.019 0.981 33 H 0.268 0.732 34 H 0.050 0.950 35 H 0.089 0.911 36 H 0.138 0.862 37 H 0.144 0.856 38 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.520 -22.461 14.899 26.996 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 N -0.242 5.242 3 C -0.096 4.096 4 C 0.285 3.715 5 O -0.418 6.418 6 N -0.357 5.357 7 C 0.100 3.900 8 C -0.582 4.582 9 H 0.097 0.903 10 C -0.127 4.127 11 N -0.530 5.530 12 Si 0.703 3.297 13 H -0.199 1.199 14 H -0.209 1.209 15 H -0.185 1.185 16 C -0.035 4.035 17 C -0.071 4.071 18 C -0.097 4.097 19 C -0.162 4.162 20 C 0.086 3.914 21 F -0.108 7.108 22 C -0.102 4.102 23 Cl -0.022 7.022 24 C -0.078 4.078 25 H 0.039 0.961 26 H 0.112 0.888 27 H 0.086 0.914 28 H 0.080 0.920 29 H 0.120 0.880 30 H 0.229 0.771 31 H 0.043 0.957 32 H 0.037 0.963 33 H 0.078 0.922 34 H 0.068 0.932 35 H 0.108 0.892 36 H 0.155 0.845 37 H 0.162 0.838 38 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -1.714 -23.059 13.639 26.845 hybrid contribution -0.446 0.151 0.112 0.484 sum -2.160 -22.908 13.750 26.805 Atomic orbital electron populations 1.22659 0.86342 1.02743 1.01534 1.61621 1.09145 1.12183 1.41236 1.22021 1.01868 0.89225 0.96443 1.20305 0.80501 0.82244 0.88495 1.90631 1.40220 1.64335 1.46601 1.46173 1.55820 1.12436 1.21257 1.19470 0.95805 0.92994 0.81732 1.21091 1.37195 0.95088 1.04812 0.90273 1.24802 0.95006 0.94545 0.98299 1.69879 1.45081 1.06918 1.31090 0.86814 0.80530 0.80140 0.82191 1.19884 1.20901 1.18450 1.21092 1.01140 0.88900 0.92405 1.19738 0.94245 0.95610 0.97548 1.21066 0.95991 0.94451 0.98230 1.21090 1.00285 0.93610 1.01212 1.17432 0.93952 0.79248 1.00812 1.91537 1.92432 1.32986 1.93796 1.21001 0.93125 0.93107 1.02918 1.98395 1.63324 1.64532 1.75956 1.20887 1.00722 0.89702 0.96484 0.96123 0.88832 0.91433 0.91999 0.87992 0.77100 0.95685 0.96266 0.92248 0.93199 0.89225 0.84463 0.83795 0.83650 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.18 8.78 60.07 0.53 0.71 16 2 N -0.52 -6.21 4.49 -245.83 -1.10 -7.32 16 3 C 0.04 0.43 5.45 -4.98 -0.03 0.40 16 4 C 0.50 8.92 7.52 -10.99 -0.08 8.84 16 5 O -0.54 -11.73 14.33 5.56 0.08 -11.65 16 6 N -0.71 -13.61 5.55 -61.47 -0.34 -13.95 16 7 C 0.22 5.34 4.50 -5.19 -0.02 5.32 16 8 C -0.54 -14.65 9.83 -34.44 -0.34 -14.99 16 9 H 0.08 2.21 7.84 -52.49 -0.41 1.80 16 10 C 0.08 2.16 5.47 -17.82 -0.10 2.06 16 11 N -0.89 -26.23 13.96 55.43 0.77 -25.46 16 12 Si 0.88 21.27 27.47 -169.99 -4.67 16.60 16 13 H -0.27 -6.53 7.11 56.52 0.40 -6.12 16 14 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 15 H -0.26 -6.29 6.54 56.52 0.37 -5.92 16 16 C 0.09 0.77 5.12 -4.98 -0.03 0.75 16 17 C -0.07 -0.61 4.88 -104.62 -0.51 -1.12 16 18 C -0.08 -0.60 7.96 -39.59 -0.32 -0.91 16 19 C -0.14 -1.13 10.03 -39.52 -0.40 -1.53 16 20 C 0.11 1.04 7.28 -39.39 -0.29 0.76 16 21 F -0.13 -1.38 16.84 2.25 0.04 -1.34 16 22 C -0.07 -0.75 6.33 -39.43 -0.25 -1.00 16 23 Cl -0.05 -0.52 28.62 -51.86 -1.48 -2.01 16 24 C -0.06 -0.55 9.48 -39.56 -0.38 -0.93 16 25 H 0.02 0.21 8.14 -51.93 -0.42 -0.22 16 26 H 0.09 1.45 5.82 -51.93 -0.30 1.15 16 27 H 0.07 0.75 6.16 -51.93 -0.32 0.43 16 28 H 0.06 0.63 8.12 -51.93 -0.42 0.21 16 29 H 0.10 1.02 7.93 -51.93 -0.41 0.61 16 30 H 0.40 6.58 8.32 -40.82 -0.34 6.24 16 31 H 0.03 0.64 7.20 -51.93 -0.37 0.27 16 32 H 0.02 0.48 7.57 -51.93 -0.39 0.09 16 33 H 0.27 7.37 8.31 -40.82 -0.34 7.03 16 34 H 0.05 0.35 8.06 -51.93 -0.42 -0.07 16 35 H 0.09 0.64 7.87 -51.93 -0.41 0.23 16 36 H 0.14 0.77 8.03 -52.49 -0.42 0.35 16 37 H 0.14 0.82 8.06 -52.49 -0.42 0.40 16 38 H 0.15 1.24 8.06 -52.49 -0.42 0.82 16 LS Contribution 340.13 15.07 5.13 5.13 Total: -1.00 -32.25 340.13 -8.44 -40.69 By element: Atomic # 1 Polarization: 5.60 SS G_CDS: -4.66 Total: 0.94 kcal Atomic # 6 Polarization: 0.56 SS G_CDS: -2.20 Total: -1.64 kcal Atomic # 7 Polarization: -46.05 SS G_CDS: -0.67 Total: -46.72 kcal Atomic # 8 Polarization: -11.73 SS G_CDS: 0.08 Total: -11.65 kcal Atomic # 9 Polarization: -1.38 SS G_CDS: 0.04 Total: -1.34 kcal Atomic # 14 Polarization: 21.27 SS G_CDS: -4.67 Total: 16.60 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.48 Total: -2.01 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -32.25 -8.44 -40.69 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000763822672.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.233 kcal (2) G-P(sol) polarization free energy of solvation -32.250 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.440 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.923 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds