Wall clock time and date at job start Tue Mar 31 2020 10:15:52
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= -1
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.53003 * 1
3 3 C 1.52996 * 109.47152 * 2 1
4 4 H 1.09000 * 109.47521 * 55.00146 * 3 2 1
5 5 C 1.53003 * 109.47332 * 175.00312 * 3 2 1
6 6 N 1.46501 * 109.47349 * 175.00381 * 5 3 2
7 7 C 1.34775 * 119.99874 * 180.02562 * 6 5 3
8 8 O 1.21556 * 120.00350 * 359.97438 * 7 6 5
9 9 C 1.47783 * 119.99797 * 179.97438 * 7 6 5
10 10 C 1.39637 * 120.14249 * 0.02562 * 9 7 6
11 11 C 1.37888 * 119.91232 * 179.97438 * 10 9 7
12 12 C 1.38397 * 120.21020 * 359.97438 * 11 10 9
13 13 C 1.38460 * 120.29235 * 0.02562 * 12 11 10
14 14 F 1.35095 * 119.96059 * 180.02562 * 13 12 11
15 15 C 1.38386 * 120.08162 * 359.74379 * 13 12 11
16 16 Cl 1.73595 * 120.10600 * 180.25902 * 15 13 12
17 17 N 1.46505 * 109.47130 * 295.00060 * 3 2 1
18 18 C 1.36931 * 119.99788 * 84.99932 * 17 3 2
19 19 H 1.08002 * 120.00438 * 0.02562 * 18 17 3
20 20 C 1.38817 * 119.99680 * 179.72358 * 18 17 3
21 21 N 1.31614 * 119.99888 * 0.27479 * 20 18 17
22 22 Si 1.86803 * 119.99862 * 180.27671 * 20 18 17
23 23 H 1.48498 * 109.47174 * 90.00121 * 22 20 18
24 24 H 1.48501 * 109.47062 * 210.00072 * 22 20 18
25 25 H 1.48504 * 109.46913 * 329.99871 * 22 20 18
26 26 H 1.08994 * 109.46841 * 180.02562 * 1 2 3
27 27 H 1.09000 * 109.46777 * 299.99691 * 1 2 3
28 28 H 1.08995 * 109.46828 * 59.99774 * 1 2 3
29 29 H 1.09000 * 109.47154 * 239.99920 * 2 1 3
30 30 H 1.09000 * 109.47681 * 120.00001 * 2 1 3
31 31 H 1.09009 * 109.46837 * 294.99855 * 5 3 2
32 32 H 1.09000 * 109.47433 * 54.99587 * 5 3 2
33 33 H 0.97000 * 120.00018 * 359.97438 * 6 5 3
34 34 H 1.07995 * 120.04311 * 359.97438 * 10 9 7
35 35 H 1.08003 * 119.89685 * 180.02562 * 11 10 9
36 36 H 1.08006 * 119.85182 * 179.97438 * 12 11 10
37 37 H 0.97000 * 119.99792 * 264.99726 * 17 3 2
38 38 H 0.97005 * 119.99715 * 179.97438 * 21 20 18
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5300 0.0000 0.0000
3 6 2.0400 1.4425 0.0000
4 1 1.6055 1.9815 0.8418
5 6 3.5649 1.4443 0.1256
6 7 4.0631 2.8168 0.0060
7 6 5.3858 3.0629 0.0858
8 8 6.1654 2.1462 0.2575
9 6 5.8884 4.4473 -0.0355
10 6 4.9955 5.5027 -0.2323
11 6 5.4696 6.7927 -0.3443
12 6 6.8279 7.0451 -0.2618
13 6 7.7209 6.0050 -0.0668
14 9 9.0453 6.2591 0.0133
15 6 7.2579 4.7063 0.0521
16 17 8.3764 3.4027 0.3033
17 7 1.6524 2.0975 -1.2518
18 6 0.4157 2.6734 -1.3688
19 1 -0.2740 2.6452 -0.5381
20 6 0.0506 3.2991 -2.5530
21 7 0.8912 3.3339 -3.5651
22 14 -1.6337 4.0915 -2.7099
23 1 -1.5562 5.5093 -2.2749
24 1 -2.0790 4.0317 -4.1253
25 1 -2.6049 3.3636 -1.8542
26 1 -0.3633 -1.0276 0.0005
27 1 -0.3633 0.5138 0.8900
28 1 -0.3633 0.5139 -0.8899
29 1 1.8934 -0.5138 -0.8900
30 1 1.8935 -0.5138 0.8899
31 1 3.8500 1.0377 1.0960
32 1 3.9955 0.8311 -0.6660
33 1 3.4411 3.5483 -0.1315
34 1 3.9351 5.3089 -0.2967
35 1 4.7788 7.6089 -0.4961
36 1 7.1929 8.0576 -0.3507
37 1 2.2720 2.1232 -1.9978
38 1 0.6359 3.7708 -4.3927
RHF calculation, no. of doubly occupied orbitals= 55
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
ZINC001698623217.mol2 38
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Tue Mar 31 2020 10:15:52
Heat of formation + Delta-G solvation = -65.482775 kcal
Electronic energy + Delta-G solvation = -23596.878282 eV
Core-core repulsion = 19800.422907 eV
Total energy + Delta-G solvation = -3796.455375 eV
No. of doubly occupied orbitals = 55
Molecular weight
(most abundant/longest-lived isotopes) = 314.094 amu
Computer time = 0.91 seconds
Orbital eigenvalues (eV)
-50.08584 -41.27294 -39.41207 -38.18104 -37.53446 -35.28870 -34.15900 -32.44082
-31.61454 -31.40330 -29.34371 -26.00230 -25.07546 -23.95271 -23.53062 -21.71644
-21.34140 -19.64399 -19.00608 -17.87698 -17.56306 -17.27234 -17.00794 -16.85834
-16.57273 -16.13704 -15.65713 -15.37919 -15.25460 -14.79748 -14.56871 -14.42409
-14.26555 -13.95550 -13.57515 -13.22546 -12.95786 -12.79995 -12.76221 -12.71293
-12.59354 -12.37490 -12.21697 -12.08649 -11.82292 -11.59763 -11.29990 -10.88328
-10.65091 -10.27964 -9.93062 -9.84070 -8.94268 -7.83623 -5.10867 -0.50878
-0.15068 0.95576 1.53100 1.56092 1.61973 1.69833 2.08428 2.52333
2.63313 2.97992 3.46572 3.51741 3.68159 3.78378 3.92790 3.97888
4.09706 4.31865 4.40599 4.50719 4.57972 4.59482 4.77710 4.79935
4.90510 4.97882 5.12035 5.13278 5.15917 5.23404 5.46192 5.54999
5.59265 5.65867 5.74663 6.36134 6.53086 7.16302 7.44624 8.15553
8.41151 9.39058
Molecular weight = 314.09amu
Principal moments of inertia in cm(-1)
A = 0.015275 B = 0.003875 C = 0.003224
Principal moments of inertia in units of 10**(-40)*gram-cm**2
A = 1832.564851 B = 7223.168167 C = 8683.724005
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.143 4.143
2 C -0.130 4.130
3 C 0.165 3.835
4 H 0.062 0.938
5 C 0.123 3.877
6 N -0.701 5.701
7 C 0.545 3.455
8 O -0.555 6.555
9 C -0.117 4.117
10 C -0.079 4.079
11 C -0.080 4.080
12 C -0.102 4.102
13 C 0.085 3.915
14 F -0.131 7.131
15 C -0.048 4.048
16 Cl -0.037 7.037
17 N -0.727 5.727
18 C -0.216 4.216
19 H 0.081 0.919
20 C -0.068 4.068
21 N -0.967 5.967
22 Si 0.956 3.044
23 H -0.286 1.286
24 H -0.308 1.308
25 H -0.274 1.274
26 H 0.051 0.949
27 H 0.050 0.950
28 H 0.049 0.951
29 H 0.044 0.956
30 H 0.074 0.926
31 H 0.082 0.918
32 H 0.052 0.948
33 H 0.411 0.589
34 H 0.152 0.848
35 H 0.184 0.816
36 H 0.185 0.815
37 H 0.372 0.628
38 H 0.246 0.754
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 9.121 7.050 9.670 15.046
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.200 4.200
2 C -0.171 4.171
3 C 0.057 3.943
4 H 0.080 0.920
5 C -0.001 4.001
6 N -0.352 5.352
7 C 0.332 3.668
8 O -0.434 6.434
9 C -0.121 4.121
10 C -0.098 4.098
11 C -0.097 4.097
12 C -0.121 4.121
13 C 0.064 3.936
14 F -0.109 7.109
15 C -0.077 4.077
16 Cl -0.007 7.007
17 N -0.368 5.368
18 C -0.348 4.348
19 H 0.098 0.902
20 C -0.261 4.261
21 N -0.618 5.618
22 Si 0.787 3.213
23 H -0.214 1.214
24 H -0.235 1.235
25 H -0.199 1.199
26 H 0.070 0.930
27 H 0.069 0.931
28 H 0.068 0.932
29 H 0.063 0.937
30 H 0.093 0.907
31 H 0.100 0.900
32 H 0.070 0.930
33 H 0.249 0.751
34 H 0.170 0.830
35 H 0.201 0.799
36 H 0.202 0.798
37 H 0.205 0.795
38 H 0.055 0.945
Dipole moment (debyes) X Y Z Total
from point charges 9.618 6.312 9.888 15.170
hybrid contribution -0.554 0.280 -0.900 1.093
sum 9.064 6.592 8.989 14.367
Atomic orbital electron populations
1.21694 0.95921 1.00530 1.01852 1.21992 0.96651 0.97447 1.00994
1.20712 0.90669 0.93291 0.89675 0.91987 1.21611 0.94490 0.82346
1.01643 1.45839 1.06554 1.11005 1.71849 1.18297 0.82790 0.88388
0.77357 1.90820 1.56089 1.46382 1.50153 1.19671 0.91829 0.94702
1.05931 1.21727 1.00340 0.92183 0.95598 1.21530 0.95196 0.97166
0.95855 1.21758 0.92721 0.99634 0.97987 1.17505 0.78921 0.91837
1.05291 1.91532 1.31041 1.94519 1.93811 1.21236 0.91405 0.89471
1.05579 1.98406 1.60063 1.47834 1.94419 1.42586 1.15836 1.66078
1.12303 1.19489 0.92529 1.25137 0.97599 0.90158 1.25316 1.00702
1.03435 0.96630 1.69805 1.36812 1.50799 1.04384 0.85391 0.81270
0.78737 0.75857 1.21368 1.23530 1.19901 0.93037 0.93108 0.93213
0.93711 0.90745 0.90008 0.93004 0.75086 0.83041 0.79871 0.79787
0.79549 0.94462
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 15.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.14 -4.62 9.18 71.98 0.66 -3.96 16
2 C -0.13 -4.08 5.61 30.59 0.17 -3.90 16
3 C 0.17 5.56 2.59 44.99 0.12 5.68 16
4 H 0.06 2.03 8.08 -2.39 -0.02 2.01 16
5 C 0.12 3.90 5.23 86.38 0.45 4.35 16
6 N -0.70 -21.98 5.34 -466.02 -2.49 -24.47 16
7 C 0.54 18.09 7.77 86.77 0.67 18.76 16
8 O -0.55 -21.33 13.97 -3.89 -0.05 -21.39 16
9 C -0.12 -3.31 5.88 -20.07 -0.12 -3.42 16
10 C -0.08 -1.73 9.54 22.52 0.21 -1.52 16
11 C -0.08 -1.23 10.03 22.22 0.22 -1.00 16
12 C -0.10 -1.60 10.02 22.36 0.22 -1.37 16
13 C 0.08 1.94 7.27 22.36 0.16 2.10 16
14 F -0.13 -3.10 16.83 44.97 0.76 -2.34 16
15 C -0.05 -1.36 6.36 22.65 0.14 -1.21 16
16 Cl -0.04 -1.15 25.68 -2.72 -0.07 -1.22 16
17 N -0.73 -31.19 4.51 -322.93 -1.46 -32.65 16
18 C -0.22 -10.26 7.75 84.04 0.65 -9.61 16
19 H 0.08 3.67 7.32 -2.91 -0.02 3.65 16
20 C -0.07 -3.53 5.50 84.86 0.47 -3.06 16
21 N -0.97 -54.40 13.06 21.65 0.28 -54.11 16
22 Si 0.96 42.42 29.55 68.60 2.03 44.44 16
23 H -0.29 -12.38 7.11 99.48 0.71 -11.67 16
24 H -0.31 -14.33 7.11 99.48 0.71 -13.63 16
25 H -0.27 -11.61 7.11 99.48 0.71 -10.90 16
26 H 0.05 1.46 8.14 -2.39 -0.02 1.44 16
27 H 0.05 1.52 8.14 -2.39 -0.02 1.50 16
28 H 0.05 1.97 5.99 -2.39 -0.01 1.95 16
29 H 0.04 1.51 8.14 -2.39 -0.02 1.49 16
30 H 0.07 1.91 8.14 -2.39 -0.02 1.89 16
31 H 0.08 2.35 8.14 -2.38 -0.02 2.33 16
32 H 0.05 1.80 8.14 -2.39 -0.02 1.78 16
33 H 0.41 12.50 6.17 -92.71 -0.57 11.93 16
34 H 0.15 3.18 6.40 -2.91 -0.02 3.16 16
35 H 0.18 1.53 8.06 -2.91 -0.02 1.51 16
36 H 0.18 1.53 8.06 -2.91 -0.02 1.50 16
37 H 0.37 18.00 7.80 -92.71 -0.72 17.28 16
38 H 0.25 13.78 8.31 -92.70 -0.77 13.01 16
Total: -1.00 -62.53 338.02 2.86 -59.67
By element:
Atomic # 1 Polarization: 30.43 SS G_CDS: -0.18 Total: 30.24 kcal
Atomic # 6 Polarization: -2.23 SS G_CDS: 4.04 Total: 1.82 kcal
Atomic # 7 Polarization: -107.57 SS G_CDS: -3.66 Total: -111.23 kcal
Atomic # 8 Polarization: -21.33 SS G_CDS: -0.05 Total: -21.39 kcal
Atomic # 9 Polarization: -3.10 SS G_CDS: 0.76 Total: -2.34 kcal
Atomic # 14 Polarization: 42.42 SS G_CDS: 2.03 Total: 44.44 kcal
Atomic # 17 Polarization: -1.15 SS G_CDS: -0.07 Total: -1.22 kcal
Total: -62.53 2.86 -59.67 kcal
The number of atoms in the molecule is 38
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
ZINC001698623217.mol2 38
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -5.812 kcal
(2) G-P(sol) polarization free energy of solvation -62.531 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -68.344 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.861 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -59.670 kcal
(6) G-S(sol) free energy of system = (1) + (5) -65.483 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 0.91 seconds