Wall clock time and date at job start Tue Mar 31 2020 10:38:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.35073 * 125.97678 * 2 1 4 4 C 1.35284 * 107.83767 * 180.02562 * 3 2 1 5 5 Cl 1.73597 * 126.07014 * 179.97438 * 4 3 2 6 6 C 1.40465 * 107.85889 * 359.97438 * 4 3 2 7 7 N 1.40223 * 125.96292 * 179.97438 * 6 4 3 8 8 C 1.34777 * 119.99502 * 180.02562 * 7 6 4 9 9 O 1.21593 * 120.00265 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99726 * 179.72660 * 8 7 6 11 11 C 1.46499 * 120.00195 * 180.27548 * 10 8 7 12 12 C 1.52990 * 109.47304 * 179.97438 * 11 10 8 13 13 C 1.53007 * 109.47343 * 299.99566 * 12 11 10 14 14 C 1.52993 * 109.47459 * 59.99679 * 12 11 10 15 15 C 1.53004 * 109.47532 * 179.97438 * 12 11 10 16 16 C 1.50694 * 109.47778 * 179.97438 * 15 12 11 17 17 H 1.08010 * 119.99443 * 359.97438 * 16 15 12 18 18 C 1.37869 * 120.00313 * 179.97438 * 16 15 12 19 19 N 1.31517 * 120.00263 * 0.02562 * 18 16 15 20 20 Si 1.86803 * 120.00096 * 180.02562 * 18 16 15 21 21 H 1.48498 * 109.47041 * 60.00654 * 20 18 16 22 22 H 1.48496 * 109.47105 * 180.02562 * 20 18 16 23 23 H 1.48501 * 109.47194 * 300.00214 * 20 18 16 24 24 N 1.31204 * 108.06748 * 0.23087 * 6 4 3 25 25 H 1.09001 * 109.47213 * 90.00019 * 1 2 3 26 26 H 1.08998 * 109.46792 * 209.99923 * 1 2 3 27 27 H 1.08994 * 109.47218 * 329.99804 * 1 2 3 28 28 H 1.07997 * 126.07829 * 0.03576 * 3 2 1 29 29 H 0.97000 * 120.00015 * 359.97438 * 7 6 4 30 30 H 0.97000 * 119.99736 * 0.26820 * 10 8 7 31 31 H 1.08998 * 109.46795 * 299.99885 * 11 10 8 32 32 H 1.09002 * 109.47196 * 59.99076 * 11 10 8 33 33 H 1.09007 * 109.46957 * 59.99810 * 13 12 11 34 34 H 1.08994 * 109.47790 * 180.02562 * 13 12 11 35 35 H 1.09002 * 109.46660 * 300.00515 * 13 12 11 36 36 H 1.09000 * 109.47594 * 59.99927 * 14 12 11 37 37 H 1.09008 * 109.47644 * 180.02562 * 14 12 11 38 38 H 1.08998 * 109.47377 * 300.00204 * 14 12 11 39 39 H 1.08998 * 109.46729 * 300.00089 * 15 12 11 40 40 H 1.09002 * 109.47033 * 59.99141 * 15 12 11 41 41 H 0.96994 * 120.00789 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2585 1.0931 0.0000 4 6 3.5441 0.6719 -0.0006 5 17 4.9523 1.6872 -0.0014 6 6 3.5373 -0.7327 -0.0003 7 7 4.6682 -1.5617 -0.0013 8 6 4.5215 -2.9015 -0.0015 9 8 3.4086 -3.3913 -0.0003 10 7 5.6085 -3.6984 -0.0079 11 6 5.4491 -5.1547 -0.0142 12 6 6.8275 -5.8185 -0.0215 13 6 7.5962 -5.3843 -1.2711 14 6 7.6038 -5.3958 1.2273 15 6 6.6611 -7.3395 -0.0274 16 6 8.0187 -7.9934 -0.0352 17 1 8.9112 -7.3849 -0.0363 18 6 8.1217 -9.3682 -0.0409 19 7 7.0351 -10.1091 -0.0401 20 14 9.8047 -10.1788 -0.0498 21 1 10.5585 -9.7678 1.1618 22 1 9.6431 -11.6549 -0.0557 23 1 10.5503 -9.7581 -1.2632 24 7 2.2880 -1.1335 -0.0047 25 1 -0.3634 0.0000 -1.0277 26 1 -0.3633 -0.8900 0.5138 27 1 -0.3633 0.8899 0.5138 28 1 1.9258 2.1205 0.0005 29 1 5.5560 -1.1710 -0.0026 30 1 6.4963 -3.3076 -0.0085 31 1 4.9011 -5.4640 0.8758 32 1 4.8964 -5.4559 -0.9041 33 1 7.7147 -4.3007 -1.2665 34 1 8.5780 -5.8575 -1.2766 35 1 7.0430 -5.6855 -2.1608 36 1 7.0563 -5.7051 2.1176 37 1 8.5860 -5.8684 1.2219 38 1 7.7224 -4.3123 1.2320 39 1 6.1137 -7.6485 0.8631 40 1 6.1078 -7.6410 -0.9168 41 1 7.1074 -11.0763 -0.0438 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000881176688.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:38:13 Heat of formation + Delta-G solvation = 41.218996 kcal Electronic energy + Delta-G solvation = -23530.012798 eV Core-core repulsion = 19893.937415 eV Total energy + Delta-G solvation = -3636.075383 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 314.125 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.63140 -39.83334 -37.29860 -36.73111 -35.03076 -33.66061 -32.49205 -31.84959 -30.18963 -27.27410 -26.83477 -26.49387 -25.79005 -23.17029 -22.12331 -21.43435 -20.14342 -18.66281 -18.16849 -17.38141 -16.40220 -16.13525 -16.10816 -15.25756 -14.91737 -14.66580 -14.37712 -14.32534 -13.88471 -13.71136 -13.35167 -13.06630 -12.96316 -12.73521 -12.25369 -12.04289 -11.92007 -11.59808 -11.21219 -11.00174 -10.88832 -10.86375 -10.74643 -10.60998 -10.38822 -10.25454 -10.00093 -9.85900 -9.19681 -9.09641 -8.92567 -8.74089 -8.34197 -8.31062 -5.98268 -3.99680 1.47698 1.62008 2.22392 2.27006 2.86364 3.33211 3.38654 3.39815 3.47700 4.12863 4.21373 4.46169 4.49645 4.84144 4.99422 5.09070 5.14658 5.37105 5.41566 5.52492 5.65074 5.76474 6.19172 6.20063 6.26452 6.42106 6.46041 6.52515 6.57214 6.64706 6.75323 6.79313 7.07646 7.09384 7.14320 7.42291 7.65754 7.78212 8.00187 8.06176 8.41858 8.66836 9.04890 9.63307 11.13180 Molecular weight = 314.13amu Principal moments of inertia in cm(-1) A = 0.027552 B = 0.002478 C = 0.002312 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1016.025255 B =11295.703576 C =12110.039098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.106 3.894 2 N -0.369 5.369 3 C 0.089 3.911 4 C -0.211 4.211 5 Cl -0.042 7.042 6 C 0.337 3.663 7 N -0.652 5.652 8 C 0.694 3.306 9 O -0.547 6.547 10 N -0.730 5.730 11 C 0.147 3.853 12 C -0.072 4.072 13 C -0.127 4.127 14 C -0.127 4.127 15 C 0.036 3.964 16 C -0.511 4.511 17 H 0.059 0.941 18 C 0.056 3.944 19 N -0.895 5.895 20 Si 0.889 3.111 21 H -0.278 1.278 22 H -0.288 1.288 23 H -0.278 1.278 24 N -0.258 5.258 25 H 0.078 0.922 26 H 0.094 0.906 27 H 0.090 0.910 28 H 0.186 0.814 29 H 0.415 0.585 30 H 0.396 0.604 31 H 0.064 0.936 32 H 0.064 0.936 33 H 0.028 0.972 34 H 0.067 0.933 35 H 0.048 0.952 36 H 0.048 0.952 37 H 0.067 0.933 38 H 0.028 0.972 39 H 0.019 0.981 40 H 0.019 0.981 41 H 0.261 0.739 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.494 26.328 0.164 27.665 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.034 4.034 2 N -0.152 5.152 3 C -0.060 4.060 4 C -0.252 4.252 5 Cl -0.014 7.014 6 C 0.077 3.923 7 N -0.306 5.306 8 C 0.393 3.607 9 O -0.420 6.420 10 N -0.385 5.385 11 C 0.024 3.976 12 C -0.073 4.073 13 C -0.184 4.184 14 C -0.184 4.184 15 C -0.001 4.001 16 C -0.550 4.550 17 H 0.077 0.923 18 C -0.145 4.145 19 N -0.534 5.534 20 Si 0.717 3.283 21 H -0.203 1.203 22 H -0.214 1.214 23 H -0.203 1.203 24 N -0.087 5.087 25 H 0.097 0.903 26 H 0.113 0.887 27 H 0.108 0.892 28 H 0.203 0.797 29 H 0.252 0.748 30 H 0.231 0.769 31 H 0.083 0.917 32 H 0.083 0.917 33 H 0.047 0.953 34 H 0.086 0.914 35 H 0.067 0.933 36 H 0.067 0.933 37 H 0.086 0.914 38 H 0.047 0.953 39 H 0.037 0.963 40 H 0.037 0.963 41 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges -10.376 24.631 0.161 26.728 hybrid contribution 2.430 0.671 -0.016 2.521 sum -7.946 25.302 0.145 26.520 Atomic orbital electron populations 1.21924 0.72838 1.04889 1.03794 1.48262 1.06873 1.03196 1.56834 1.22105 0.88994 0.94345 1.00553 1.20299 0.89265 0.89177 1.26447 1.98323 1.37994 1.67065 1.98010 1.18719 0.87701 0.87028 0.98816 1.42090 1.06465 1.04581 1.77440 1.16007 0.85751 0.80163 0.78755 1.91032 1.23301 1.72884 1.54741 1.45340 1.06907 1.07668 1.78630 1.21566 0.98701 0.75380 1.01965 1.20921 0.91616 0.99593 0.95130 1.21763 1.01617 0.97741 0.97300 1.21762 1.01584 0.97770 0.97304 1.19086 0.97431 0.86025 0.97568 1.21138 0.92378 0.91050 1.50392 0.92304 1.25009 0.96256 0.97648 0.95566 1.69951 1.27514 1.05164 1.50768 0.86710 0.84741 0.78334 0.78504 1.20334 1.21419 1.20339 1.78335 0.98347 1.04211 1.27833 0.90350 0.88702 0.89161 0.79739 0.74788 0.76946 0.91742 0.91747 0.95262 0.91423 0.93320 0.93314 0.91426 0.95272 0.96274 0.96281 0.92977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.11 0.59 11.47 59.85 0.69 1.28 16 2 N -0.37 -3.77 4.01 -68.14 -0.27 -4.05 16 3 C 0.09 0.74 11.46 -17.18 -0.20 0.55 16 4 C -0.21 -2.23 6.67 -39.80 -0.27 -2.49 16 5 Cl -0.04 -0.37 29.18 -51.86 -1.51 -1.88 16 6 C 0.34 4.64 7.82 -154.31 -1.21 3.43 16 7 N -0.65 -8.60 5.46 -15.48 -0.08 -8.68 16 8 C 0.69 11.42 8.53 -86.92 -0.74 10.68 16 9 O -0.55 -11.37 15.06 5.28 0.08 -11.29 16 10 N -0.73 -10.91 4.96 -65.23 -0.32 -11.23 16 11 C 0.15 2.64 4.56 -4.05 -0.02 2.62 16 12 C -0.07 -1.36 0.54 -154.51 -0.08 -1.45 16 13 C -0.13 -2.21 8.05 37.16 0.30 -1.91 16 14 C -0.13 -2.21 8.05 37.15 0.30 -1.91 16 15 C 0.04 0.89 4.04 -27.88 -0.11 0.78 16 16 C -0.51 -13.55 7.65 -34.45 -0.26 -13.81 16 17 H 0.06 1.49 5.68 -52.48 -0.30 1.19 16 18 C 0.06 1.57 5.46 -17.82 -0.10 1.47 16 19 N -0.89 -26.50 13.29 55.43 0.74 -25.76 16 20 Si 0.89 21.23 29.54 -169.99 -5.02 16.20 16 21 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 22 H -0.29 -6.91 7.11 56.52 0.40 -6.51 16 23 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 24 N -0.26 -3.93 10.80 31.46 0.34 -3.59 16 25 H 0.08 0.34 8.14 -51.93 -0.42 -0.08 16 26 H 0.09 0.59 8.14 -51.93 -0.42 0.17 16 27 H 0.09 0.19 8.14 -51.93 -0.42 -0.23 16 28 H 0.19 0.73 8.06 -52.49 -0.42 0.31 16 29 H 0.42 4.12 8.71 -40.82 -0.36 3.76 16 30 H 0.40 4.84 6.18 -40.82 -0.25 4.59 16 31 H 0.06 1.24 8.14 -51.93 -0.42 0.82 16 32 H 0.06 1.24 8.14 -51.93 -0.42 0.82 16 33 H 0.03 0.41 6.86 -51.93 -0.36 0.05 16 34 H 0.07 1.27 6.62 -51.93 -0.34 0.92 16 35 H 0.05 0.87 8.14 -51.93 -0.42 0.45 16 36 H 0.05 0.88 8.14 -51.93 -0.42 0.45 16 37 H 0.07 1.27 6.62 -51.92 -0.34 0.92 16 38 H 0.03 0.41 6.86 -51.93 -0.36 0.05 16 39 H 0.02 0.51 8.14 -51.93 -0.42 0.08 16 40 H 0.02 0.50 8.14 -51.93 -0.42 0.08 16 41 H 0.26 7.36 8.31 -40.82 -0.34 7.02 16 LS Contribution 355.08 15.07 5.35 5.35 Total: -1.00 -34.97 355.08 -8.08 -43.05 By element: Atomic # 1 Polarization: 8.32 SS G_CDS: -5.67 Total: 2.65 kcal Atomic # 6 Polarization: 0.93 SS G_CDS: -1.70 Total: -0.77 kcal Atomic # 7 Polarization: -53.71 SS G_CDS: 0.39 Total: -53.32 kcal Atomic # 8 Polarization: -11.37 SS G_CDS: 0.08 Total: -11.29 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -5.02 Total: 16.20 kcal Atomic # 17 Polarization: -0.37 SS G_CDS: -1.51 Total: -1.88 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -34.97 -8.08 -43.05 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000881176688.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 84.271 kcal (2) G-P(sol) polarization free energy of solvation -34.974 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 49.297 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.078 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.052 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.219 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds