Wall clock time and date at job start Tue Mar 31 2020 10:54:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 H 1.08998 * 109.47090 * 2 1 4 4 C 1.53009 * 109.46705 * 240.00369 * 2 1 3 5 5 C 1.53003 * 109.46602 * 175.00070 * 4 2 1 6 6 H 1.08995 * 109.47706 * 54.99622 * 5 4 2 7 7 C 1.52997 * 109.46686 * 174.99751 * 5 4 2 8 8 N 1.46497 * 109.46931 * 294.99493 * 5 4 2 9 9 C 1.34781 * 120.00132 * 155.00599 * 8 5 4 10 10 O 1.21701 * 119.99786 * 354.66133 * 9 8 5 11 11 C 1.46659 * 120.00262 * 174.94479 * 9 8 5 12 12 C 1.36676 * 126.84089 * 4.72767 * 11 9 8 13 13 N 1.33299 * 107.82596 * 179.89997 * 12 11 9 14 14 C 1.31026 * 109.70822 * 0.37676 * 13 12 11 15 15 Cl 1.73601 * 125.43415 * 179.76293 * 14 13 12 16 16 N 1.34598 * 109.12630 * 359.77011 * 14 13 12 17 17 C 1.46499 * 126.48813 * 179.97438 * 16 14 13 18 18 N 1.46496 * 109.47217 * 120.00052 * 2 1 3 19 19 C 1.36934 * 120.00097 * 274.99750 * 18 2 1 20 20 H 1.07994 * 119.99895 * 0.02562 * 19 18 2 21 21 C 1.38809 * 120.00195 * 180.02562 * 19 18 2 22 22 N 1.31627 * 119.99719 * 359.97438 * 21 19 18 23 23 Si 1.86801 * 120.00386 * 180.02562 * 21 19 18 24 24 H 1.48502 * 109.46752 * 359.97438 * 23 21 19 25 25 H 1.48500 * 109.47340 * 119.99630 * 23 21 19 26 26 H 1.48502 * 109.46939 * 240.00218 * 23 21 19 27 27 H 1.09006 * 109.47612 * 59.99963 * 1 2 3 28 28 H 1.09007 * 109.47314 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47273 * 300.00171 * 1 2 3 30 30 H 1.08995 * 109.47415 * 55.00153 * 4 2 1 31 31 H 1.09000 * 109.46594 * 294.99092 * 4 2 1 32 32 H 1.09005 * 109.47086 * 179.97438 * 7 5 4 33 33 H 1.08997 * 109.47280 * 299.99586 * 7 5 4 34 34 H 1.08999 * 109.47515 * 60.00184 * 7 5 4 35 35 H 0.96995 * 120.00130 * 335.00107 * 8 5 4 36 36 H 1.07996 * 126.08666 * 0.04139 * 12 11 9 37 37 H 1.09001 * 109.46959 * 273.48216 * 17 16 14 38 38 H 1.08993 * 109.47238 * 33.47898 * 17 16 14 39 39 H 1.09000 * 109.47501 * 153.48015 * 17 16 14 40 40 H 0.97004 * 119.99752 * 95.00547 * 18 2 1 41 41 H 0.97000 * 119.99454 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0399 -0.7212 -1.2494 5 6 3.5647 -0.6133 -1.3138 6 1 3.9953 -0.9922 -0.3870 7 6 4.0849 -1.4382 -2.4926 8 7 3.9478 0.7894 -1.4926 9 6 5.1611 1.2136 -1.0869 10 8 5.9004 0.4570 -0.4853 11 6 5.5879 2.5889 -1.3650 12 6 4.8408 3.5783 -1.9403 13 7 5.5981 4.6730 -2.0106 14 6 6.7854 4.4213 -1.5168 15 17 8.0938 5.5576 -1.4129 16 7 6.8287 3.1413 -1.1030 17 6 7.9733 2.4616 -0.4914 18 7 2.0183 -0.6906 1.1961 19 6 2.1491 -0.0075 2.3757 20 1 1.8919 1.0402 2.4243 21 6 2.6123 -0.6617 3.5089 22 7 2.9253 -1.9388 3.4498 23 14 2.7902 0.2699 5.1182 24 1 2.3753 1.6821 4.9210 25 1 1.9300 -0.3594 6.1522 26 1 4.2072 0.2280 5.5605 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3634 0.5139 0.8900 30 1 1.6053 -0.2617 -2.1371 31 1 1.7516 -1.7715 -1.2056 32 1 5.1713 -1.3610 -2.5388 33 1 3.7999 -2.4818 -2.3596 34 1 3.6544 -1.0593 -3.4195 35 1 3.3283 1.4128 -1.9029 36 1 3.8181 3.4897 -2.2759 37 1 8.6154 2.0562 -1.2733 38 1 8.5389 3.1728 0.1107 39 1 7.6174 1.6503 0.1435 40 1 2.2491 -1.6318 1.1525 41 1 3.2494 -2.3959 4.2416 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001134989470.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:54:54 Heat of formation + Delta-G solvation = 25.384201 kcal Electronic energy + Delta-G solvation = -24458.687192 eV Core-core repulsion = 20821.925161 eV Total energy + Delta-G solvation = -3636.762031 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 314.125 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -42.42141 -39.38524 -37.27399 -36.84865 -34.76643 -34.14654 -32.27458 -31.27676 -29.30394 -28.58189 -27.33752 -26.35326 -23.81846 -23.47694 -21.89893 -20.83685 -20.19117 -19.72459 -18.18227 -17.20824 -16.53366 -16.39652 -16.01943 -14.96744 -14.80017 -14.66494 -14.22402 -13.98540 -13.73508 -13.55546 -13.38038 -13.03659 -12.92760 -12.75578 -12.21419 -12.08113 -12.01897 -11.86872 -11.75019 -11.61532 -11.07644 -10.84453 -10.64163 -10.56440 -10.46092 -10.20968 -10.04579 -9.89048 -9.78932 -9.61574 -8.92636 -8.87491 -8.64951 -6.91401 -5.72708 -3.00378 0.96615 1.08292 2.47204 2.49393 3.33342 3.38567 3.45092 3.51000 3.52652 4.41944 4.54518 4.62754 4.81537 4.99738 5.06708 5.11712 5.34808 5.40537 5.46428 5.61050 5.65144 5.79094 5.85734 5.89493 6.00480 6.10705 6.15098 6.27624 6.30651 6.41927 6.46982 6.55327 6.64492 6.76110 6.90100 7.07630 7.41798 7.64256 7.74195 8.32520 8.45855 9.57419 10.14468 10.48548 11.50088 Molecular weight = 314.13amu Principal moments of inertia in cm(-1) A = 0.011888 B = 0.004178 C = 0.003559 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2354.771984 B = 6700.760239 C = 7864.431927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.171 3.829 3 H 0.046 0.954 4 C -0.131 4.131 5 C 0.145 3.855 6 H 0.109 0.891 7 C -0.161 4.161 8 N -0.699 5.699 9 C 0.594 3.406 10 O -0.531 6.531 11 C -0.056 4.056 12 C 0.043 3.957 13 N -0.469 5.469 14 C 0.254 3.746 15 Cl 0.038 6.962 16 N -0.411 5.411 17 C 0.057 3.943 18 N -0.720 5.720 19 C -0.232 4.232 20 H 0.067 0.933 21 C -0.012 4.012 22 N -0.931 5.931 23 Si 0.901 3.099 24 H -0.282 1.282 25 H -0.292 1.292 26 H -0.293 1.293 27 H 0.035 0.965 28 H 0.046 0.954 29 H 0.052 0.948 30 H 0.063 0.937 31 H 0.078 0.922 32 H 0.054 0.946 33 H 0.067 0.933 34 H 0.052 0.948 35 H 0.397 0.603 36 H 0.189 0.811 37 H 0.085 0.915 38 H 0.089 0.911 39 H 0.119 0.881 40 H 0.383 0.617 41 H 0.253 0.747 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.690 8.849 -15.108 18.744 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C 0.061 3.939 3 H 0.064 0.936 4 C -0.170 4.170 5 C 0.042 3.958 6 H 0.127 0.873 7 C -0.220 4.220 8 N -0.350 5.350 9 C 0.379 3.621 10 O -0.408 6.408 11 C -0.173 4.173 12 C -0.111 4.111 13 N -0.190 5.190 14 C -0.032 4.032 15 Cl 0.065 6.935 16 N -0.094 5.094 17 C -0.084 4.084 18 N -0.362 5.362 19 C -0.364 4.364 20 H 0.085 0.915 21 C -0.207 4.207 22 N -0.580 5.580 23 Si 0.732 3.268 24 H -0.207 1.207 25 H -0.219 1.219 26 H -0.220 1.220 27 H 0.054 0.946 28 H 0.065 0.935 29 H 0.071 0.929 30 H 0.082 0.918 31 H 0.096 0.904 32 H 0.073 0.927 33 H 0.085 0.915 34 H 0.071 0.929 35 H 0.232 0.768 36 H 0.206 0.794 37 H 0.103 0.897 38 H 0.107 0.893 39 H 0.137 0.863 40 H 0.217 0.783 41 H 0.063 0.937 Dipole moment (debyes) X Y Z Total from point charges 7.287 9.164 -14.760 18.840 hybrid contribution 0.307 -0.066 1.182 1.223 sum 7.594 9.098 -13.578 18.022 Atomic orbital electron populations 1.22457 0.99457 1.00816 0.99843 1.20234 0.91642 0.95560 0.86500 0.93578 1.22182 0.93371 1.02438 0.98992 1.21115 0.95447 0.79120 1.00133 0.87259 1.22195 1.01374 1.00340 0.98044 1.45591 1.15216 1.12063 1.62092 1.16556 0.82656 0.83930 0.78949 1.90829 1.53807 1.56134 1.40053 1.20980 0.86868 0.97373 1.12114 1.22641 0.99996 0.87321 1.01184 1.70025 0.99987 1.28269 1.20731 1.23156 0.92669 0.82694 1.04718 1.98421 1.42238 1.55862 1.96954 1.45034 1.11926 1.08930 1.43514 1.22496 0.86349 0.99699 0.99889 1.42403 1.77967 1.10553 1.05292 1.19200 1.36146 0.93697 0.87329 0.91462 1.24676 1.02269 0.95921 0.97882 1.69659 1.51096 1.08593 1.28642 0.86209 0.77283 0.78841 0.84437 1.20695 1.21933 1.22000 0.94639 0.93531 0.92897 0.91829 0.90384 0.92674 0.91451 0.92909 0.76838 0.79410 0.89667 0.89279 0.86260 0.78348 0.93688 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 34. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.80 9.49 37.15 0.35 -2.44 16 2 C 0.17 3.10 2.84 -67.93 -0.19 2.91 16 3 H 0.05 0.86 7.56 -51.93 -0.39 0.47 16 4 C -0.13 -1.86 4.29 -26.73 -0.11 -1.97 16 5 C 0.15 2.18 2.56 -67.93 -0.17 2.00 16 6 H 0.11 2.19 6.98 -51.93 -0.36 1.83 16 7 C -0.16 -2.02 9.48 37.16 0.35 -1.66 16 8 N -0.70 -9.55 4.43 -55.12 -0.24 -9.79 16 9 C 0.59 9.45 7.74 -12.86 -0.10 9.35 16 10 O -0.53 -10.32 14.43 5.19 0.07 -10.24 16 11 C -0.06 -0.78 6.91 -82.10 -0.57 -1.35 16 12 C 0.04 0.54 11.37 -17.48 -0.20 0.34 16 13 N -0.47 -6.52 11.21 -11.49 -0.13 -6.65 16 14 C 0.25 3.30 8.48 -90.34 -0.77 2.54 16 15 Cl 0.04 0.38 28.81 -51.86 -1.49 -1.11 16 16 N -0.41 -5.45 3.18 -118.36 -0.38 -5.83 16 17 C 0.06 0.62 10.62 59.85 0.64 1.26 16 18 N -0.72 -17.23 4.49 -53.43 -0.24 -17.47 16 19 C -0.23 -6.37 9.93 -15.06 -0.15 -6.52 16 20 H 0.07 1.83 7.83 -52.49 -0.41 1.42 16 21 C -0.01 -0.33 5.50 -17.43 -0.10 -0.43 16 22 N -0.93 -28.13 13.06 55.49 0.72 -27.40 16 23 Si 0.90 22.82 29.55 -169.99 -5.02 17.79 16 24 H -0.28 -6.95 7.11 56.52 0.40 -6.54 16 25 H -0.29 -7.40 7.11 56.52 0.40 -7.00 16 26 H -0.29 -7.53 7.11 56.52 0.40 -7.12 16 27 H 0.03 0.48 8.14 -51.93 -0.42 0.06 16 28 H 0.05 0.79 8.14 -51.92 -0.42 0.37 16 29 H 0.05 0.99 8.14 -51.93 -0.42 0.57 16 30 H 0.06 0.71 8.14 -51.93 -0.42 0.29 16 31 H 0.08 1.12 8.14 -51.93 -0.42 0.70 16 32 H 0.05 0.75 8.14 -51.93 -0.42 0.33 16 33 H 0.07 0.80 8.14 -51.93 -0.42 0.38 16 34 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 35 H 0.40 4.21 7.54 -40.82 -0.31 3.90 16 36 H 0.19 1.68 7.46 -52.49 -0.39 1.29 16 37 H 0.08 0.77 8.14 -51.93 -0.42 0.35 16 38 H 0.09 0.77 7.89 -51.93 -0.41 0.36 16 39 H 0.12 1.59 6.22 -51.93 -0.32 1.27 16 40 H 0.38 9.82 7.80 -40.82 -0.32 9.50 16 41 H 0.25 7.46 8.31 -40.82 -0.34 7.12 16 LS Contribution 360.58 15.07 5.43 5.43 Total: -1.00 -33.47 360.58 -8.15 -41.62 By element: Atomic # 1 Polarization: 15.50 SS G_CDS: -5.86 Total: 9.64 kcal Atomic # 6 Polarization: 5.03 SS G_CDS: -1.02 Total: 4.01 kcal Atomic # 7 Polarization: -66.88 SS G_CDS: -0.27 Total: -67.15 kcal Atomic # 8 Polarization: -10.32 SS G_CDS: 0.07 Total: -10.24 kcal Atomic # 14 Polarization: 22.82 SS G_CDS: -5.02 Total: 17.79 kcal Atomic # 17 Polarization: 0.38 SS G_CDS: -1.49 Total: -1.11 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -33.47 -8.15 -41.62 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001134989470.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 67.005 kcal (2) G-P(sol) polarization free energy of solvation -33.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.533 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.149 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.621 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.384 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds