Wall clock time and date at job start Tue Mar 31 2020 11:03:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35506 * 117.00195 * 2 1 4 4 N 1.31035 * 125.74753 * 359.97438 * 3 2 1 5 5 C 1.34389 * 109.32403 * 180.02562 * 4 3 2 6 6 Cl 1.73603 * 125.87272 * 179.97438 * 5 4 3 7 7 C 1.34514 * 108.25077 * 0.02562 * 5 4 3 8 8 C 1.50693 * 126.55462 * 180.02562 * 7 5 4 9 9 N 1.46900 * 109.47448 * 270.02517 * 8 7 5 10 10 C 1.46891 * 111.00538 * 169.99857 * 9 8 7 11 11 C 1.53236 * 109.34490 * 187.25409 * 10 9 8 12 12 N 1.47086 * 108.51747 * 306.17144 * 11 10 9 13 13 C 1.36936 * 120.87786 * 231.18160 * 12 11 10 14 14 H 1.07993 * 120.00304 * 27.13527 * 13 12 11 15 15 C 1.38813 * 119.99575 * 206.85386 * 13 12 11 16 16 N 1.31614 * 120.00290 * 17.16731 * 15 13 12 17 17 Si 1.86810 * 119.99564 * 197.16760 * 15 13 12 18 18 H 1.48494 * 109.47108 * 60.00166 * 17 15 13 19 19 H 1.48503 * 109.46632 * 179.97438 * 17 15 13 20 20 H 1.48497 * 109.47043 * 300.00011 * 17 15 13 21 21 C 1.47083 * 118.23837 * 51.45711 * 12 11 10 22 22 C 1.46900 * 110.99950 * 294.30469 * 9 8 7 23 23 N 1.35855 * 125.75181 * 180.29091 * 3 2 1 24 24 C 1.46502 * 126.48253 * 0.02562 * 23 3 2 25 25 H 1.09002 * 109.46734 * 300.00277 * 1 2 3 26 26 H 1.09003 * 109.46971 * 59.99736 * 1 2 3 27 27 H 1.08997 * 109.47028 * 180.02562 * 1 2 3 28 28 H 1.08998 * 109.47370 * 150.02400 * 8 7 5 29 29 H 1.09005 * 109.47008 * 30.02494 * 8 7 5 30 30 H 1.09002 * 109.49046 * 67.29429 * 10 9 8 31 31 H 1.08999 * 109.49556 * 307.21622 * 10 9 8 32 32 H 1.08998 * 109.63090 * 186.46185 * 11 10 9 33 33 H 1.09001 * 109.62654 * 65.87812 * 11 10 9 34 34 H 0.97001 * 119.99757 * 180.02562 * 16 15 13 35 35 H 1.09000 * 109.62320 * 68.25155 * 21 12 11 36 36 H 1.08997 * 109.62861 * 188.82856 * 21 12 11 37 37 H 1.09000 * 109.49232 * 292.70484 * 22 9 8 38 38 H 1.09005 * 109.49167 * 52.75416 * 22 9 8 39 39 H 1.09000 * 109.46998 * 270.18600 * 24 23 3 40 40 H 1.09002 * 109.47149 * 30.18370 * 24 23 3 41 41 H 1.09000 * 109.47165 * 150.18544 * 24 23 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0442 1.2073 0.0000 4 7 1.4442 2.3723 -0.0005 5 6 2.3680 3.3483 -0.0009 6 17 2.0457 5.0541 -0.0022 7 6 3.5854 2.7761 -0.0012 8 6 4.9126 3.4898 -0.0012 9 7 5.3434 3.7228 -1.3861 10 6 6.5066 4.6187 -1.4321 11 6 6.8115 4.9802 -2.8896 12 7 6.9547 3.7352 -3.6596 13 6 8.0505 3.5213 -4.4524 14 1 8.9894 3.9998 -4.2166 15 6 7.9559 2.6846 -5.5561 16 7 6.7747 2.3679 -6.0425 17 14 9.5053 2.0081 -6.3507 18 1 10.2620 1.2060 -5.3562 19 1 9.1352 1.1467 -7.5024 20 1 10.3502 3.1335 -6.8250 21 6 5.8868 2.7287 -3.5601 22 6 5.6211 2.4535 -2.0716 23 7 3.3869 1.4140 -0.0056 24 6 4.4270 0.3823 -0.0132 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3633 -1.0276 0.0005 28 1 5.6543 2.8778 0.5120 29 1 4.8112 4.4454 0.5134 30 1 7.3694 4.1174 -0.9935 31 1 6.2886 5.5269 -0.8701 32 1 7.7394 5.5501 -2.9391 33 1 5.9928 5.5719 -3.2991 34 1 6.7086 1.7830 -6.8135 35 1 4.9809 3.1082 -4.0329 36 1 6.2029 1.8095 -4.0531 37 1 6.4962 1.9823 -1.6241 38 1 4.7610 1.7911 -1.9729 39 1 4.6873 0.1213 1.0126 40 1 4.0570 -0.5028 -0.5306 41 1 5.3106 0.7609 -0.5272 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001324743723.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:37 Heat of formation + Delta-G solvation = 71.904394 kcal Electronic energy + Delta-G solvation = -24931.500999 eV Core-core repulsion = 21296.756235 eV Total energy + Delta-G solvation = -3634.744764 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 314.125 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.24606 -38.60950 -37.91817 -36.38777 -34.66725 -33.93080 -31.66072 -30.04852 -29.79633 -27.91276 -26.99739 -26.35946 -24.44396 -22.75864 -22.42163 -21.32764 -20.14228 -19.13720 -18.13699 -16.99669 -16.67338 -16.47594 -15.45944 -15.28524 -14.79208 -14.59250 -14.35001 -14.30032 -13.85324 -13.48992 -13.33574 -13.15102 -13.01671 -12.67087 -12.43851 -12.21216 -11.85089 -11.75794 -11.40573 -11.11079 -11.04981 -10.93907 -10.74258 -10.54006 -10.34591 -10.10985 -10.05285 -9.77221 -9.68590 -9.58791 -8.52141 -7.99619 -7.82362 -6.67838 -5.79285 -3.20810 1.78017 1.91908 2.13657 2.86690 3.36712 3.42754 3.43428 3.55210 4.36678 4.49158 4.58003 4.76145 4.90828 5.02422 5.07319 5.11718 5.18603 5.35022 5.38008 5.41453 5.45983 5.55426 5.81413 5.84459 5.92839 6.07162 6.11837 6.15579 6.26027 6.46154 6.52007 6.65627 6.93825 7.20888 7.24263 7.49514 7.61224 7.66625 7.76711 7.79251 8.41962 9.19693 9.83241 10.42151 11.29417 Molecular weight = 314.13amu Principal moments of inertia in cm(-1) A = 0.016609 B = 0.004020 C = 0.003545 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1685.427445 B = 6962.665800 C = 7896.221944 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.053 3.947 2 O -0.298 6.298 3 C 0.411 3.589 4 N -0.520 5.520 5 C 0.087 3.913 6 Cl -0.006 7.006 7 C 0.016 3.984 8 C 0.130 3.870 9 N -0.524 5.524 10 C 0.046 3.954 11 C 0.149 3.851 12 N -0.595 5.595 13 C -0.254 4.254 14 H 0.066 0.934 15 C 0.002 3.998 16 N -0.903 5.903 17 Si 0.902 3.098 18 H -0.285 1.285 19 H -0.290 1.290 20 H -0.282 1.282 21 C 0.181 3.819 22 C 0.031 3.969 23 N -0.445 5.445 24 C 0.065 3.935 25 H 0.061 0.939 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.038 0.962 29 H 0.098 0.902 30 H 0.029 0.971 31 H 0.066 0.934 32 H 0.057 0.943 33 H 0.027 0.973 34 H 0.254 0.746 35 H 0.027 0.973 36 H 0.087 0.913 37 H 0.025 0.975 38 H 0.058 0.942 39 H 0.077 0.923 40 H 0.093 0.907 41 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.604 -3.219 15.686 18.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.042 4.042 2 O -0.203 6.203 3 C 0.111 3.889 4 N -0.256 5.256 5 C -0.066 4.066 6 Cl 0.022 6.978 7 C -0.097 4.097 8 C 0.001 3.999 9 N -0.249 5.249 10 C -0.083 4.083 11 C 0.022 3.978 12 N -0.318 5.318 13 C -0.383 4.383 14 H 0.084 0.916 15 C -0.196 4.196 16 N -0.547 5.547 17 Si 0.732 3.268 18 H -0.211 1.211 19 H -0.216 1.216 20 H -0.209 1.209 21 C 0.055 3.945 22 C -0.098 4.098 23 N -0.139 5.139 24 C -0.076 4.076 25 H 0.080 0.920 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.056 0.944 29 H 0.116 0.884 30 H 0.047 0.953 31 H 0.084 0.916 32 H 0.075 0.925 33 H 0.045 0.955 34 H 0.064 0.936 35 H 0.045 0.955 36 H 0.105 0.895 37 H 0.043 0.957 38 H 0.076 0.924 39 H 0.095 0.905 40 H 0.112 0.888 41 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges -9.693 -3.225 15.260 18.364 hybrid contribution 1.874 -0.849 -0.089 2.059 sum -7.820 -4.075 15.172 17.548 Atomic orbital electron populations 1.22959 0.74858 1.03381 1.03039 1.85860 1.23718 1.20537 1.90137 1.20026 0.80667 0.85999 1.02255 1.70124 1.32085 0.95927 1.27474 1.19874 0.88628 0.87205 1.10938 1.98347 1.96060 1.06062 1.97326 1.20483 0.97015 0.80508 1.11726 1.20473 0.88831 0.98581 0.92003 1.61967 1.35941 1.15092 1.11888 1.22637 0.90034 0.95280 1.00330 1.20983 0.98461 0.89630 0.88730 1.44134 1.22119 1.13746 1.51814 1.19151 0.88372 1.26848 1.03940 0.91650 1.25024 0.96380 1.02121 0.96089 1.70023 1.21805 1.38609 1.24306 0.86381 0.82925 0.78954 0.78575 1.21148 1.21620 1.20853 1.20912 0.90787 0.94656 0.88142 1.23170 0.97316 0.89596 0.99680 1.44771 1.04836 1.06488 1.57800 1.22317 0.91077 0.90438 1.03808 0.91994 0.91763 0.87910 0.94386 0.88406 0.95300 0.91607 0.92487 0.95465 0.93552 0.95503 0.89466 0.95696 0.92408 0.90468 0.88834 0.88295 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.48 10.67 101.05 1.08 1.56 16 2 O -0.30 -3.71 10.49 -18.21 -0.19 -3.91 16 3 C 0.41 6.06 8.51 -89.18 -0.76 5.30 16 4 N -0.52 -8.39 10.64 -11.85 -0.13 -8.52 16 5 C 0.09 1.40 7.69 -17.75 -0.14 1.26 16 6 Cl -0.01 -0.09 28.88 -51.86 -1.50 -1.59 16 7 C 0.02 0.24 5.58 -81.30 -0.45 -0.21 16 8 C 0.13 1.85 4.96 -4.98 -0.02 1.83 16 9 N -0.52 -9.12 4.62 -235.48 -1.09 -10.20 16 10 C 0.05 0.79 5.62 -3.71 -0.02 0.77 16 11 C 0.15 3.11 6.69 -3.60 -0.02 3.09 16 12 N -0.59 -14.91 3.03 -171.73 -0.52 -15.43 16 13 C -0.25 -6.91 9.63 -15.06 -0.15 -7.05 16 14 H 0.07 1.74 7.88 -52.49 -0.41 1.32 16 15 C 0.00 0.07 4.93 -17.43 -0.09 -0.02 16 16 N -0.90 -26.21 11.16 55.49 0.62 -25.59 16 17 Si 0.90 21.47 29.59 -169.99 -5.03 16.44 16 18 H -0.28 -6.68 7.11 56.52 0.40 -6.28 16 19 H -0.29 -6.97 7.11 56.52 0.40 -6.57 16 20 H -0.28 -6.66 7.11 56.52 0.40 -6.25 16 21 C 0.18 4.37 5.45 -3.37 -0.02 4.35 16 22 C 0.03 0.60 4.13 -3.47 -0.01 0.58 16 23 N -0.44 -6.23 2.79 -121.26 -0.34 -6.57 16 24 C 0.07 0.70 10.04 59.85 0.60 1.30 16 25 H 0.06 0.54 8.14 -51.93 -0.42 0.12 16 26 H 0.06 0.62 8.14 -51.93 -0.42 0.20 16 27 H 0.10 0.60 8.14 -51.93 -0.42 0.18 16 28 H 0.04 0.50 7.90 -51.93 -0.41 0.09 16 29 H 0.10 1.27 7.74 -51.93 -0.40 0.87 16 30 H 0.03 0.50 8.14 -51.93 -0.42 0.08 16 31 H 0.07 0.96 7.99 -51.93 -0.41 0.54 16 32 H 0.06 1.14 7.95 -51.93 -0.41 0.73 16 33 H 0.03 0.60 8.14 -51.93 -0.42 0.18 16 34 H 0.25 7.16 8.31 -40.82 -0.34 6.82 16 35 H 0.03 0.72 8.14 -51.93 -0.42 0.29 16 36 H 0.09 2.32 6.12 -51.93 -0.32 2.00 16 37 H 0.02 0.47 7.58 -51.93 -0.39 0.08 16 38 H 0.06 1.05 5.14 -51.93 -0.27 0.78 16 39 H 0.08 0.66 8.14 -51.93 -0.42 0.24 16 40 H 0.09 0.91 8.14 -51.93 -0.42 0.49 16 41 H 0.10 1.15 4.90 -51.93 -0.25 0.89 16 LS Contribution 343.07 15.07 5.17 5.17 Total: -1.00 -31.86 343.07 -8.81 -40.67 By element: Atomic # 1 Polarization: 2.57 SS G_CDS: -5.80 Total: -3.23 kcal Atomic # 6 Polarization: 12.76 SS G_CDS: 0.00 Total: 12.76 kcal Atomic # 7 Polarization: -64.86 SS G_CDS: -1.45 Total: -66.31 kcal Atomic # 8 Polarization: -3.71 SS G_CDS: -0.19 Total: -3.91 kcal Atomic # 14 Polarization: 21.47 SS G_CDS: -5.03 Total: 16.44 kcal Atomic # 17 Polarization: -0.09 SS G_CDS: -1.50 Total: -1.59 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -31.86 -8.81 -40.67 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001324743723.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 112.571 kcal (2) G-P(sol) polarization free energy of solvation -31.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 80.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.807 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.666 kcal (6) G-S(sol) free energy of system = (1) + (5) 71.904 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds