Wall clock time and date at job start Tue Mar 31 2020 10:36:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.50706 * 109.47238 * 2 1 4 4 N 1.34229 * 126.27668 * 265.02466 * 3 2 1 5 5 H 0.97000 * 125.74450 * 359.95640 * 4 3 2 6 6 N 1.39935 * 108.52024 * 179.97438 * 4 3 2 7 7 C 1.30524 * 108.89674 * 0.02562 * 6 4 3 8 8 Cl 1.73601 * 126.00652 * 180.02562 * 7 6 4 9 9 C 1.38067 * 126.28253 * 84.71025 * 3 2 1 10 10 C 1.47383 * 126.42370 * 0.03523 * 9 3 2 11 11 O 1.21607 * 119.99814 * 89.99986 * 10 9 3 12 12 N 1.34784 * 120.00107 * 270.00263 * 10 9 3 13 13 C 1.46494 * 119.99849 * 179.97438 * 12 10 9 14 14 C 1.53007 * 109.47171 * 179.97438 * 13 12 10 15 15 C 1.52993 * 109.47442 * 180.02562 * 14 13 12 16 16 H 1.09003 * 109.46914 * 304.99924 * 15 14 13 17 17 C 1.52997 * 109.47302 * 185.00138 * 15 14 13 18 18 N 1.46500 * 109.47158 * 64.99544 * 15 14 13 19 19 C 1.36933 * 119.99779 * 204.99991 * 18 15 14 20 20 H 1.07997 * 120.00622 * 0.02562 * 19 18 15 21 21 C 1.38821 * 119.99735 * 180.02562 * 19 18 15 22 22 N 1.31616 * 119.99972 * 359.97438 * 21 19 18 23 23 Si 1.86797 * 119.99800 * 179.97438 * 21 19 18 24 24 H 1.48501 * 109.47622 * 359.97438 * 23 21 19 25 25 H 1.48506 * 109.47006 * 120.00201 * 23 21 19 26 26 H 1.48502 * 109.47123 * 239.99702 * 23 21 19 27 27 H 1.09002 * 109.47153 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.46832 * 60.00314 * 1 2 3 29 29 H 1.09004 * 109.47261 * 300.00295 * 1 2 3 30 30 H 1.08998 * 109.47533 * 119.99506 * 2 1 3 31 31 H 1.08996 * 109.47853 * 239.99849 * 2 1 3 32 32 H 0.97001 * 119.99748 * 359.97438 * 12 10 9 33 33 H 1.09000 * 109.47175 * 299.99336 * 13 12 10 34 34 H 1.09002 * 109.47586 * 60.00198 * 13 12 10 35 35 H 1.09003 * 109.46656 * 300.00270 * 14 13 12 36 36 H 1.09002 * 109.46671 * 59.99678 * 14 13 12 37 37 H 1.08998 * 109.47481 * 180.02562 * 17 15 14 38 38 H 1.09003 * 109.46962 * 299.99757 * 17 15 14 39 39 H 1.09002 * 109.47246 * 59.99212 * 17 15 14 40 40 H 0.96999 * 119.99959 * 25.00713 * 18 15 14 41 41 H 0.97002 * 120.00182 * 180.02562 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0324 1.4209 0.0000 4 7 2.3856 2.1384 -1.0780 5 1 2.3618 1.8292 -1.9971 6 7 2.7944 3.4074 -0.6529 7 6 2.6965 3.4695 0.6472 8 17 3.0891 4.8415 1.6357 9 6 2.2080 2.2254 1.1082 10 6 1.9403 1.8553 2.5095 11 8 2.8188 1.3535 3.1843 12 7 0.7219 2.0730 3.0431 13 6 0.4557 1.7046 4.4357 14 6 -0.9913 2.0553 4.7885 15 6 -1.2691 1.6712 6.2431 16 1 -1.0280 0.6189 6.3934 17 6 -2.7476 1.9058 6.5590 18 7 -0.4435 2.4930 7.1314 19 6 -0.1144 2.0343 8.3790 20 1 -0.4631 1.0666 8.7079 21 6 0.6675 2.8133 9.2209 22 7 1.0929 3.9925 8.8199 23 14 1.1159 2.1879 10.9230 24 1 0.5176 0.8446 11.1304 25 1 2.5932 2.0964 11.0435 26 1 0.5929 3.1259 11.9487 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 0.5139 0.8900 30 1 1.8934 -0.5137 0.8900 31 1 1.8934 -0.5138 -0.8899 32 1 0.0213 2.4735 2.5049 33 1 0.6120 0.6336 4.5645 34 1 1.1321 2.2521 5.0921 35 1 -1.1472 3.1264 4.6597 36 1 -1.6680 1.5082 4.1321 37 1 -2.9455 1.6326 7.5955 38 1 -2.9888 2.9581 6.4087 39 1 -3.3619 1.2943 5.8980 40 1 -0.1300 3.3621 6.8359 41 1 1.6396 4.5367 9.4081 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001714473683.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:36:15 Heat of formation + Delta-G solvation = 25.151671 kcal Electronic energy + Delta-G solvation = -23765.733530 eV Core-core repulsion = 20128.961416 eV Total energy + Delta-G solvation = -3636.772114 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 314.125 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -41.83738 -39.06856 -36.98243 -36.51395 -34.56623 -34.25513 -32.27257 -31.68584 -30.04443 -29.02494 -27.95964 -24.72339 -23.86131 -23.07028 -22.15440 -21.71910 -20.21296 -19.42788 -18.15099 -17.17898 -16.57980 -15.95955 -15.57161 -15.40867 -15.11137 -14.90155 -14.46350 -14.14421 -13.72943 -13.58110 -13.45122 -13.12075 -12.76496 -12.45554 -12.29518 -12.12498 -12.01370 -11.75539 -11.62394 -11.50946 -11.04650 -10.92499 -10.89023 -10.72259 -10.60661 -10.25779 -9.99232 -9.74550 -9.72585 -9.59607 -9.03782 -8.88230 -8.75582 -6.90393 -5.70414 -2.99011 1.21303 1.26087 1.93095 2.56620 2.69535 3.47060 3.48425 3.53849 3.56223 4.06854 4.36660 4.64762 4.65364 4.74270 4.96378 5.04132 5.14825 5.33700 5.41780 5.43686 5.54766 5.60736 5.63115 5.72576 5.76425 5.91794 6.10287 6.20957 6.38311 6.43442 6.52052 6.62650 6.71492 6.75641 6.89827 6.96354 7.09394 7.68643 7.76819 8.39953 8.47799 9.59350 10.16259 10.50688 11.52241 Molecular weight = 314.13amu Principal moments of inertia in cm(-1) A = 0.015457 B = 0.003318 C = 0.002991 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1811.000041 B = 8436.556344 C = 9359.828188 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.070 4.070 3 C 0.144 3.856 4 N -0.448 5.448 5 H 0.447 0.553 6 N -0.278 5.278 7 C 0.159 3.841 8 Cl 0.028 6.972 9 C -0.263 4.263 10 C 0.591 3.409 11 O -0.524 6.524 12 N -0.717 5.717 13 C 0.121 3.879 14 C -0.132 4.132 15 C 0.175 3.825 16 H 0.049 0.951 17 C -0.163 4.163 18 N -0.724 5.724 19 C -0.237 4.237 20 H 0.070 0.930 21 C -0.012 4.012 22 N -0.931 5.931 23 Si 0.904 3.096 24 H -0.281 1.281 25 H -0.292 1.292 26 H -0.293 1.293 27 H 0.071 0.929 28 H 0.057 0.943 29 H 0.066 0.934 30 H 0.100 0.900 31 H 0.085 0.915 32 H 0.396 0.604 33 H 0.065 0.935 34 H 0.086 0.914 35 H 0.066 0.934 36 H 0.062 0.938 37 H 0.053 0.947 38 H 0.045 0.955 39 H 0.035 0.965 40 H 0.384 0.616 41 H 0.254 0.746 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.916 -5.888 -24.095 24.974 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.109 4.109 3 C 0.012 3.988 4 N -0.157 5.157 5 H 0.293 0.707 6 N -0.103 5.103 7 C -0.034 4.034 8 Cl 0.056 6.944 9 C -0.279 4.279 10 C 0.374 3.626 11 O -0.399 6.399 12 N -0.367 5.367 13 C -0.001 4.001 14 C -0.171 4.171 15 C 0.064 3.936 16 H 0.067 0.933 17 C -0.224 4.224 18 N -0.366 5.366 19 C -0.369 4.369 20 H 0.088 0.912 21 C -0.208 4.208 22 N -0.580 5.580 23 Si 0.735 3.265 24 H -0.206 1.206 25 H -0.219 1.219 26 H -0.220 1.220 27 H 0.090 0.910 28 H 0.076 0.924 29 H 0.085 0.915 30 H 0.119 0.881 31 H 0.104 0.896 32 H 0.230 0.770 33 H 0.083 0.917 34 H 0.105 0.895 35 H 0.084 0.916 36 H 0.080 0.920 37 H 0.072 0.928 38 H 0.065 0.935 39 H 0.054 0.946 40 H 0.217 0.783 41 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges -1.876 -5.576 -24.346 25.046 hybrid contribution -0.083 -0.035 0.897 0.901 sum -1.959 -5.611 -23.449 24.190 Atomic orbital electron populations 1.21779 0.92896 1.03127 1.02890 1.20421 0.97321 0.87993 1.05134 1.21431 0.96167 0.95180 0.86055 1.45832 1.51723 1.09221 1.08913 0.70709 1.77164 1.23345 0.98911 1.10907 1.22647 0.99759 0.90430 0.90526 1.98455 1.92189 1.39083 1.64723 1.19892 1.18486 0.94547 0.94975 1.17069 0.82548 0.78419 0.84538 1.90840 1.44631 1.42849 1.61547 1.46096 1.12664 1.63429 1.14525 1.21500 0.97610 1.00863 0.80123 1.22061 0.94653 1.01792 0.98589 1.20143 0.90384 0.95532 0.87517 0.93307 1.22427 0.98489 1.00427 1.01007 1.42461 1.59817 1.20078 1.14199 1.19256 1.25634 1.00951 0.91015 0.91186 1.24719 1.00835 0.96718 0.98577 1.69663 1.40544 1.11269 1.36488 0.86167 0.77920 0.77747 0.84649 1.20600 1.21889 1.22022 0.91001 0.92372 0.91501 0.88116 0.89623 0.77046 0.91665 0.89534 0.91559 0.91967 0.92759 0.93549 0.94623 0.78253 0.93621 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.80 9.89 37.16 0.37 -0.44 16 2 C -0.07 -0.44 6.27 -27.88 -0.17 -0.62 16 3 C 0.14 1.34 6.55 -81.60 -0.53 0.80 16 4 N -0.45 -3.69 7.28 33.86 0.25 -3.45 16 5 H 0.45 1.88 8.96 -182.72 -1.64 0.25 16 6 N -0.28 -3.31 12.64 33.18 0.42 -2.89 16 7 C 0.16 2.13 7.89 -16.91 -0.13 1.99 16 8 Cl 0.03 0.38 29.19 -51.86 -1.51 -1.13 16 9 C -0.26 -3.40 5.88 -105.04 -0.62 -4.02 16 10 C 0.59 9.15 7.26 -12.54 -0.09 9.06 16 11 O -0.52 -10.49 17.11 5.27 0.09 -10.40 16 12 N -0.72 -9.71 5.55 -61.40 -0.34 -10.05 16 13 C 0.12 1.97 5.56 -4.04 -0.02 1.95 16 14 C -0.13 -1.96 4.87 -26.73 -0.13 -2.09 16 15 C 0.17 3.28 2.89 -67.94 -0.20 3.08 16 16 H 0.05 0.94 8.08 -51.93 -0.42 0.52 16 17 C -0.16 -2.80 9.49 37.16 0.35 -2.45 16 18 N -0.72 -17.61 4.57 -53.43 -0.24 -17.86 16 19 C -0.24 -6.53 9.93 -15.06 -0.15 -6.68 16 20 H 0.07 1.88 7.83 -52.49 -0.41 1.47 16 21 C -0.01 -0.36 5.50 -17.43 -0.10 -0.45 16 22 N -0.93 -28.35 13.06 55.49 0.72 -27.62 16 23 Si 0.90 22.69 29.55 -169.99 -5.02 17.67 16 24 H -0.28 -6.80 7.11 56.52 0.40 -6.40 16 25 H -0.29 -7.43 7.11 56.52 0.40 -7.03 16 26 H -0.29 -7.39 7.11 56.52 0.40 -6.99 16 27 H 0.07 0.31 8.14 -51.93 -0.42 -0.11 16 28 H 0.06 0.26 8.14 -51.93 -0.42 -0.16 16 29 H 0.07 0.44 8.14 -51.93 -0.42 0.02 16 30 H 0.10 0.79 8.09 -51.93 -0.42 0.37 16 31 H 0.09 0.32 8.14 -51.93 -0.42 -0.11 16 32 H 0.40 4.25 8.46 -40.82 -0.35 3.90 16 33 H 0.07 1.09 8.14 -51.93 -0.42 0.66 16 34 H 0.09 1.79 7.75 -51.93 -0.40 1.38 16 35 H 0.07 0.99 8.14 -51.93 -0.42 0.57 16 36 H 0.06 0.74 8.14 -51.93 -0.42 0.31 16 37 H 0.05 1.02 8.14 -51.93 -0.42 0.60 16 38 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 39 H 0.03 0.50 8.14 -51.93 -0.42 0.07 16 40 H 0.38 10.02 7.80 -40.82 -0.32 9.70 16 41 H 0.25 7.52 8.31 -40.82 -0.34 7.18 16 LS Contribution 368.95 15.07 5.56 5.56 Total: -1.00 -34.62 368.95 -8.82 -43.44 By element: Atomic # 1 Polarization: 13.91 SS G_CDS: -7.32 Total: 6.59 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -1.43 Total: 0.14 kcal Atomic # 7 Polarization: -62.68 SS G_CDS: 0.81 Total: -61.87 kcal Atomic # 8 Polarization: -10.49 SS G_CDS: 0.09 Total: -10.40 kcal Atomic # 14 Polarization: 22.69 SS G_CDS: -5.02 Total: 17.67 kcal Atomic # 17 Polarization: 0.38 SS G_CDS: -1.51 Total: -1.13 kcal Total LS contribution 5.56 Total: 5.56 kcal Total: -34.62 -8.82 -43.44 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001714473683.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 68.595 kcal (2) G-P(sol) polarization free energy of solvation -34.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 33.976 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.824 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.443 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.152 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds