Wall clock time and date at job start Tue Mar 31 2020 11:56:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17402 * 1 3 3 C 1.47203 * 179.97438 * 2 1 4 4 N 1.46501 * 109.47344 * 225.54337 * 3 2 1 5 5 C 1.36931 * 120.00432 * 264.66902 * 4 3 2 6 6 H 1.08001 * 120.00304 * 199.43388 * 5 4 3 7 7 C 1.38817 * 119.99811 * 19.42928 * 5 4 3 8 8 N 1.31616 * 120.00051 * 20.92194 * 7 5 4 9 9 Si 1.86806 * 119.99864 * 200.91960 * 7 5 4 10 10 H 1.48502 * 109.46854 * 60.00212 * 9 7 5 11 11 H 1.48497 * 109.46710 * 180.02562 * 9 7 5 12 12 H 1.48498 * 109.46945 * 299.99900 * 9 7 5 13 13 C 1.46500 * 119.99328 * 84.66201 * 4 3 2 14 14 C 1.50697 * 109.46793 * 90.00711 * 13 4 3 15 15 O 1.21282 * 120.00711 * 359.97438 * 14 13 4 16 16 N 1.34781 * 120.00286 * 179.97438 * 14 13 4 17 17 C 1.46495 * 120.00405 * 179.97438 * 16 14 13 18 18 H 1.08998 * 109.47224 * 32.61128 * 17 16 14 19 19 C 1.53007 * 109.47127 * 272.60704 * 17 16 14 20 20 C 1.53002 * 109.47078 * 152.61374 * 17 16 14 21 21 C 1.50695 * 109.46806 * 294.79119 * 20 17 16 22 22 C 1.38263 * 120.00149 * 99.11985 * 21 20 17 23 23 C 1.38211 * 120.00401 * 180.25198 * 22 21 20 24 24 C 1.38259 * 119.99887 * 359.79270 * 23 22 21 25 25 C 1.38213 * 119.99878 * 359.95474 * 24 23 22 26 26 C 1.38218 * 120.00758 * 278.88913 * 21 20 17 27 27 C 1.50705 * 119.99080 * 359.97438 * 26 21 20 28 28 H 4.40648 * 5.51460 * 179.97438 * 4 1 2 29 29 H 1.09007 * 109.46902 * 105.54334 * 3 2 1 30 30 H 1.09000 * 109.47183 * 345.55164 * 3 2 1 31 31 H 0.97003 * 119.99722 * 180.02562 * 8 7 5 32 32 H 1.08991 * 109.47680 * 330.00278 * 13 4 3 33 33 H 1.09006 * 109.47134 * 209.99969 * 13 4 3 34 34 H 0.97004 * 119.99782 * 359.97438 * 16 14 13 35 35 H 1.09005 * 109.46290 * 59.99969 * 19 17 16 36 36 H 1.08993 * 109.46874 * 179.97438 * 19 17 16 37 37 H 1.08998 * 109.47414 * 300.00307 * 19 17 16 38 38 H 1.09005 * 109.46779 * 174.79797 * 20 17 16 39 39 H 1.08989 * 109.47457 * 54.79495 * 20 17 16 40 40 H 1.08003 * 119.99674 * 0.02562 * 22 21 20 41 41 H 1.08000 * 120.00040 * 179.76751 * 23 22 21 42 42 H 1.07997 * 120.00094 * 179.97438 * 24 23 22 43 43 H 1.08001 * 119.99993 * 180.02562 * 25 24 23 44 44 H 1.09006 * 109.46919 * 272.71656 * 27 26 21 45 45 H 1.09003 * 109.46779 * 152.72189 * 27 26 21 46 46 H 1.08990 * 109.47705 * 32.72187 * 27 26 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6461 0.0007 0.0000 4 7 3.1340 0.9682 0.9859 5 6 3.4656 2.2375 0.5936 6 1 4.1044 2.8459 1.2167 7 6 2.9807 2.7424 -0.6052 8 7 1.9112 2.2111 -1.1584 9 14 3.8461 4.1761 -1.4330 10 1 5.2472 3.7952 -1.7447 11 1 3.1358 4.5240 -2.6899 12 1 3.8428 5.3489 -0.5222 13 6 3.2670 0.5777 2.3916 14 6 4.6466 0.0199 2.6295 15 8 5.4405 -0.0455 1.7149 16 7 4.9985 -0.4063 3.8587 17 6 6.3394 -0.9491 4.0899 18 1 7.0527 -0.4452 3.4378 19 6 6.3419 -2.4488 3.7865 20 6 6.7360 -0.7237 5.5504 21 6 6.8580 0.7548 5.8152 22 6 5.8189 1.4366 6.4210 23 6 5.9287 2.7936 6.6593 24 6 7.0793 3.4685 6.2957 25 6 8.1201 2.7859 5.6948 26 6 8.0105 1.4284 5.4570 27 6 9.1454 0.6840 4.8019 28 1 -1.0501 0.0000 -0.0003 29 1 3.0092 0.2762 -0.9902 30 1 3.0098 -0.9943 0.2564 31 1 1.5726 2.5637 -1.9963 32 1 2.5221 -0.1814 2.6299 33 1 3.1132 1.4499 3.0271 34 1 4.3638 -0.3537 4.5904 35 1 6.0593 -2.6093 2.7460 36 1 7.3397 -2.8524 3.9581 37 1 5.6286 -2.9526 4.4386 38 1 7.6928 -1.2080 5.7459 39 1 5.9738 -1.1482 6.2035 40 1 4.9200 0.9095 6.7048 41 1 5.1155 3.3269 7.1291 42 1 7.1649 4.5289 6.4814 43 1 9.0191 3.3129 5.4112 44 1 9.7961 0.2651 5.5695 45 1 9.7165 1.3699 4.1762 46 1 8.7446 -0.1211 4.1863 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491623888.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:56:22 Heat of formation + Delta-G solvation = 62.759517 kcal Electronic energy + Delta-G solvation = -26257.799149 eV Core-core repulsion = 22728.631026 eV Total energy + Delta-G solvation = -3529.168123 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 314.174 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -39.93064 -38.79741 -36.18684 -35.21759 -32.99238 -31.92706 -31.48965 -31.25630 -30.30439 -27.39531 -27.02898 -26.14313 -25.81990 -22.61992 -22.04147 -21.26998 -20.36538 -19.78031 -17.43421 -16.72691 -16.38430 -16.31517 -15.84682 -15.22988 -15.09438 -14.76976 -14.44923 -13.91536 -13.70119 -13.59072 -13.28340 -13.18898 -13.11151 -12.80301 -12.55139 -12.38365 -12.21343 -12.12742 -12.07475 -11.81004 -11.40893 -11.22915 -11.01819 -10.91870 -10.80804 -10.73539 -10.63522 -10.22381 -9.96194 -9.24209 -8.89609 -8.78533 -8.67254 -8.63660 -8.48356 -8.35470 -6.94137 -5.72516 -3.15053 1.36039 1.40581 3.42886 3.49055 3.49575 3.53757 3.66410 3.74488 4.23580 4.43186 4.60616 4.65001 4.75706 4.89224 4.93853 5.03638 5.17872 5.27744 5.39431 5.39749 5.44859 5.53200 5.57687 5.61941 5.64546 5.70475 5.73240 5.78552 5.82148 5.90978 6.06750 6.08930 6.16603 6.23193 6.33230 6.33375 6.48721 6.52277 6.63803 6.77283 6.99221 7.02886 7.29215 7.46093 7.80879 8.06699 8.33223 9.03863 9.15017 9.24023 9.80163 10.25132 11.30753 Molecular weight = 314.17amu Principal moments of inertia in cm(-1) A = 0.012638 B = 0.004120 C = 0.003584 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2214.976872 B = 6794.448146 C = 7810.554591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.301 4.301 2 C -0.093 4.093 3 C 0.272 3.728 4 N -0.561 5.561 5 C -0.257 4.257 6 H 0.070 0.930 7 C 0.006 3.994 8 N -0.888 5.888 9 Si 0.900 3.100 10 H -0.283 1.283 11 H -0.291 1.291 12 H -0.284 1.284 13 C 0.133 3.867 14 C 0.481 3.519 15 O -0.523 6.523 16 N -0.737 5.737 17 C 0.144 3.856 18 H 0.088 0.912 19 C -0.162 4.162 20 C -0.088 4.088 21 C -0.077 4.077 22 C -0.110 4.110 23 C -0.122 4.122 24 C -0.121 4.121 25 C -0.119 4.119 26 C -0.081 4.081 27 C -0.120 4.120 28 H 0.190 0.810 29 H 0.094 0.906 30 H 0.036 0.964 31 H 0.255 0.745 32 H 0.067 0.933 33 H 0.078 0.922 34 H 0.391 0.609 35 H 0.063 0.937 36 H 0.058 0.942 37 H 0.054 0.946 38 H 0.083 0.917 39 H 0.074 0.926 40 H 0.119 0.881 41 H 0.119 0.881 42 H 0.118 0.882 43 H 0.118 0.882 44 H 0.068 0.932 45 H 0.065 0.935 46 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.306 -5.971 17.173 20.425 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.320 4.320 2 C -0.096 4.096 3 C 0.147 3.853 4 N -0.278 5.278 5 C -0.385 4.385 6 H 0.088 0.912 7 C -0.193 4.193 8 N -0.531 5.531 9 Si 0.730 3.270 10 H -0.210 1.210 11 H -0.217 1.217 12 H -0.210 1.210 13 C 0.001 3.999 14 C 0.266 3.734 15 O -0.396 6.396 16 N -0.393 5.393 17 C 0.039 3.961 18 H 0.106 0.894 19 C -0.220 4.220 20 C -0.126 4.126 21 C -0.077 4.077 22 C -0.128 4.128 23 C -0.140 4.140 24 C -0.140 4.140 25 C -0.137 4.137 26 C -0.081 4.081 27 C -0.176 4.176 28 H 0.207 0.793 29 H 0.111 0.889 30 H 0.054 0.946 31 H 0.065 0.935 32 H 0.085 0.915 33 H 0.096 0.904 34 H 0.224 0.776 35 H 0.082 0.918 36 H 0.077 0.923 37 H 0.073 0.927 38 H 0.102 0.898 39 H 0.093 0.907 40 H 0.137 0.863 41 H 0.137 0.863 42 H 0.136 0.864 43 H 0.136 0.864 44 H 0.086 0.914 45 H 0.084 0.916 46 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 9.821 -5.922 16.261 19.898 hybrid contribution -0.195 1.077 -0.131 1.102 sum 9.626 -4.845 16.130 19.399 Atomic orbital electron populations 1.24146 0.95261 1.07249 1.05361 1.24242 0.95205 0.94223 0.95920 1.17652 0.82619 0.89691 0.95315 1.43520 1.73813 1.09967 1.00519 1.19042 1.24113 0.90327 1.05066 0.91224 1.24872 0.96194 0.98541 0.99669 1.70101 1.19929 1.43403 1.19702 0.86402 0.79602 0.82088 0.78917 1.20976 1.21693 1.21030 1.20654 0.90987 0.99165 0.89105 1.23094 0.92480 0.76444 0.81382 1.90627 1.52803 1.53563 1.42613 1.46341 1.14492 1.66353 1.12067 1.20828 0.86541 0.93890 0.94862 0.89365 1.22188 1.01469 0.95719 1.02653 1.20937 1.02725 0.92350 0.96573 1.19626 0.93790 0.95576 0.98663 1.20976 0.97993 0.94498 0.99322 1.21095 0.97799 0.94568 1.00580 1.21096 0.93961 0.99668 0.99226 1.21006 0.99046 0.93852 0.99795 1.19742 0.95556 0.94034 0.98813 1.20895 0.96186 1.00530 1.00038 0.79266 0.88856 0.94611 0.93501 0.91499 0.90390 0.77602 0.91833 0.92255 0.92675 0.89812 0.90688 0.86297 0.86256 0.86379 0.86375 0.91372 0.91601 0.90936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 20. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.30 -6.92 19.25 29.55 0.57 -6.35 16 2 C -0.09 -2.31 11.43 -37.12 -0.42 -2.73 16 3 C 0.27 6.81 5.41 -6.83 -0.04 6.77 16 4 N -0.56 -14.19 1.97 -177.95 -0.35 -14.54 16 5 C -0.26 -7.19 9.64 -15.06 -0.15 -7.34 16 6 H 0.07 1.97 7.91 -52.49 -0.42 1.55 16 7 C 0.01 0.17 4.86 -17.43 -0.08 0.09 16 8 N -0.89 -25.81 9.48 55.49 0.53 -25.28 16 9 Si 0.90 22.53 29.60 -169.99 -5.03 17.49 16 10 H -0.28 -7.17 7.11 56.52 0.40 -6.77 16 11 H -0.29 -7.27 7.11 56.52 0.40 -6.87 16 12 H -0.28 -7.01 7.11 56.52 0.40 -6.61 16 13 C 0.13 2.69 6.16 -5.20 -0.03 2.65 16 14 C 0.48 9.21 7.89 -10.99 -0.09 9.12 16 15 O -0.52 -12.33 16.05 5.56 0.09 -12.24 16 16 N -0.74 -10.27 4.77 -53.81 -0.26 -10.53 16 17 C 0.14 1.78 2.31 -67.93 -0.16 1.63 16 18 H 0.09 1.35 5.92 -51.93 -0.31 1.04 16 19 C -0.16 -1.81 9.51 37.16 0.35 -1.45 16 20 C -0.09 -0.84 4.23 -27.88 -0.12 -0.96 16 21 C -0.08 -0.87 4.87 -104.62 -0.51 -1.38 16 22 C -0.11 -1.22 9.67 -39.58 -0.38 -1.60 16 23 C -0.12 -1.38 10.05 -39.58 -0.40 -1.78 16 24 C -0.12 -1.40 10.05 -39.58 -0.40 -1.80 16 25 C -0.12 -1.41 9.69 -39.59 -0.38 -1.79 16 26 C -0.08 -0.97 5.88 -104.62 -0.62 -1.58 16 27 C -0.12 -1.20 9.17 36.01 0.33 -0.87 16 28 H 0.19 3.63 7.80 -54.08 -0.42 3.21 16 29 H 0.09 2.57 6.60 -51.92 -0.34 2.23 16 30 H 0.04 0.82 8.11 -51.93 -0.42 0.40 16 31 H 0.25 7.28 8.31 -40.82 -0.34 6.95 16 32 H 0.07 1.21 8.07 -51.93 -0.42 0.79 16 33 H 0.08 1.52 8.04 -51.93 -0.42 1.10 16 34 H 0.39 4.37 8.63 -40.82 -0.35 4.02 16 35 H 0.06 0.88 8.14 -51.93 -0.42 0.46 16 36 H 0.06 0.55 8.14 -51.93 -0.42 0.12 16 37 H 0.05 0.54 8.14 -51.93 -0.42 0.11 16 38 H 0.08 0.69 7.26 -51.93 -0.38 0.31 16 39 H 0.07 0.60 8.01 -51.94 -0.42 0.18 16 40 H 0.12 1.07 8.04 -52.48 -0.42 0.65 16 41 H 0.12 1.12 8.06 -52.49 -0.42 0.70 16 42 H 0.12 1.13 8.06 -52.49 -0.42 0.71 16 43 H 0.12 1.20 8.06 -52.49 -0.42 0.77 16 44 H 0.07 0.56 8.14 -51.93 -0.42 0.13 16 45 H 0.06 0.65 8.07 -51.93 -0.42 0.23 16 46 H 0.07 0.75 5.25 -51.93 -0.27 0.48 16 LS Contribution 386.03 15.07 5.82 5.82 Total: -1.00 -33.94 386.03 -8.82 -42.77 By element: Atomic # 1 Polarization: 12.99 SS G_CDS: -7.10 Total: 5.89 kcal Atomic # 6 Polarization: -6.86 SS G_CDS: -2.52 Total: -9.38 kcal Atomic # 7 Polarization: -50.27 SS G_CDS: -0.08 Total: -50.35 kcal Atomic # 8 Polarization: -12.33 SS G_CDS: 0.09 Total: -12.24 kcal Atomic # 14 Polarization: 22.53 SS G_CDS: -5.03 Total: 17.49 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -33.94 -8.82 -42.77 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491623888.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 105.526 kcal (2) G-P(sol) polarization free energy of solvation -33.942 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.584 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.825 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.767 kcal (6) G-S(sol) free energy of system = (1) + (5) 62.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds