Wall clock time and date at job start Tue Mar 31 2020 11:25:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 N 1.46495 * 109.57971 * 2 1 4 4 C 1.34781 * 119.99713 * 299.73546 * 3 2 1 5 5 O 1.21583 * 119.99991 * 0.02562 * 4 3 2 6 6 C 1.47646 * 119.99846 * 179.97438 * 4 3 2 7 7 C 1.40004 * 119.89454 * 180.02562 * 6 4 3 8 8 C 1.36321 * 120.10843 * 180.02562 * 7 6 4 9 9 C 1.40891 * 119.88794 * 359.97438 * 8 7 6 10 10 C 1.41109 * 120.10217 * 179.97438 * 9 8 7 11 11 H 1.07999 * 119.99940 * 334.69497 * 10 9 8 12 12 C 1.40230 * 120.00150 * 154.69524 * 10 9 8 13 13 N 1.30639 * 119.99831 * 334.63930 * 12 10 9 14 14 Si 1.86800 * 120.00195 * 154.63414 * 12 10 9 15 15 H 1.48496 * 109.47144 * 180.02562 * 14 12 10 16 16 H 1.48503 * 109.46904 * 300.00528 * 14 12 10 17 17 H 1.48505 * 109.46593 * 60.00072 * 14 12 10 18 18 C 1.40885 * 119.79425 * 0.24881 * 9 8 7 19 19 C 1.36317 * 119.89126 * 359.51224 * 18 9 8 20 20 C 1.53149 * 109.57953 * 239.73824 * 2 1 3 21 21 N 1.46905 * 109.36807 * 240.07958 * 20 2 1 22 22 C 1.46945 * 111.05666 * 297.99144 * 21 20 2 23 23 C 1.53131 * 109.35261 * 61.95645 * 22 21 20 24 24 C 1.53386 * 109.68618 * 120.33350 * 2 1 3 25 25 C 1.53387 * 108.59911 * 60.89800 * 24 2 1 26 26 C 1.46940 * 111.06192 * 61.98704 * 21 20 2 27 27 H 1.09002 * 109.46781 * 60.00230 * 1 2 3 28 28 H 1.09004 * 109.47189 * 179.97438 * 1 2 3 29 29 H 1.08992 * 109.47072 * 299.99661 * 1 2 3 30 30 H 0.96999 * 120.00055 * 119.73723 * 3 2 1 31 31 H 1.08005 * 119.95151 * 0.02562 * 7 6 4 32 32 H 1.07995 * 120.05592 * 179.97438 * 8 7 6 33 33 H 0.97000 * 120.00400 * 354.19110 * 13 12 10 34 34 H 1.08005 * 120.05306 * 179.74177 * 18 9 8 35 35 H 1.07998 * 119.94987 * 180.20363 * 19 18 9 36 36 H 1.09001 * 109.48610 * 0.04055 * 20 2 1 37 37 H 1.08992 * 109.49142 * 120.08813 * 20 2 1 38 38 H 1.08996 * 109.49836 * 181.92399 * 22 21 20 39 39 H 1.09010 * 109.48987 * 301.99712 * 22 21 20 40 40 H 1.09003 * 109.57572 * 240.26102 * 23 22 21 41 41 H 1.08994 * 109.57470 * 119.88180 * 23 22 21 42 42 H 1.09005 * 110.11172 * 300.25346 * 24 2 1 43 43 H 1.09007 * 109.57398 * 299.18840 * 25 24 2 44 44 H 1.08998 * 109.57586 * 178.80818 * 25 24 2 45 45 H 1.08997 * 109.49098 * 58.00560 * 26 21 20 46 46 H 1.09007 * 109.49138 * 178.07036 * 26 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0209 1.3802 0.0000 4 6 1.7013 2.2091 -1.0136 5 8 1.0051 1.8115 -1.9276 6 6 2.1956 3.6004 -1.0133 7 6 1.8617 4.4597 -2.0670 8 6 2.3162 5.7449 -2.0714 9 6 3.1226 6.2081 -1.0131 10 6 3.5959 7.5375 -1.0133 11 1 3.7091 8.0702 -1.9460 12 6 3.9193 8.1669 0.1973 13 7 3.3549 7.7750 1.3084 14 14 5.1572 9.5657 0.2213 15 1 5.3228 10.0562 1.6131 16 1 6.4636 9.0793 -0.2905 17 1 4.6694 10.6730 -0.6397 18 6 3.4597 5.3383 0.0427 19 6 2.9965 4.0562 0.0408 20 6 2.0432 -0.7272 -1.2463 21 7 2.8578 -1.8793 -0.8373 22 6 4.0362 -1.4479 -0.0728 23 6 3.5801 -0.7405 1.2064 24 6 2.0467 -0.7294 1.2465 25 6 1.5458 -2.1786 1.2081 26 6 2.0588 -2.8455 -0.0712 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5137 0.8899 30 1 2.5760 1.6976 0.7294 31 1 1.2432 4.1039 -2.8777 32 1 2.0585 6.4070 -2.8849 33 1 2.6515 7.1074 1.2859 34 1 4.0811 5.6877 0.8540 35 1 3.2517 3.3896 0.8512 36 1 1.1969 -1.0727 -1.8400 37 1 2.6504 -0.0450 -1.8412 38 1 4.6392 -2.3177 0.1879 39 1 4.6298 -0.7610 -0.6763 40 1 3.9530 0.2838 1.2102 41 1 3.9643 -1.2741 2.0757 42 1 1.6874 -0.2322 2.1476 43 1 0.4558 -2.1885 1.2133 44 1 1.9219 -2.7182 2.0773 45 1 1.2127 -3.1764 -0.6733 46 1 2.6780 -3.7041 0.1893 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000892777472.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:25:15 Heat of formation + Delta-G solvation = -22.069437 kcal Electronic energy + Delta-G solvation = -26777.043416 eV Core-core repulsion = 23244.196834 eV Total energy + Delta-G solvation = -3532.846582 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 314.174 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -41.35926 -38.85293 -37.32856 -34.53351 -34.07469 -32.15057 -31.70039 -30.80409 -29.54910 -29.31844 -26.64488 -25.72264 -23.39291 -23.08126 -22.48822 -21.42548 -20.84393 -19.47338 -18.16581 -17.84861 -17.15064 -16.44119 -16.01571 -15.74639 -14.71602 -14.58600 -14.32271 -14.20087 -13.84942 -13.66311 -13.30098 -13.18200 -12.76399 -12.54712 -12.49048 -12.38058 -12.27446 -12.12709 -12.06907 -11.77699 -11.61642 -11.47082 -11.34376 -11.16982 -10.98652 -10.85261 -10.54464 -10.43182 -10.26202 -9.89157 -9.74128 -9.23720 -8.92744 -8.88081 -8.11100 -7.97006 -7.74892 -7.46037 -4.72181 2.15053 2.81977 3.01090 3.05202 3.22976 3.65004 3.79083 3.82239 3.94911 4.36623 4.47023 4.56512 4.68866 4.98297 5.00506 5.03459 5.09639 5.23367 5.29223 5.37681 5.46930 5.61349 5.70271 5.73056 5.76766 5.81732 5.85336 5.88901 5.92598 5.99892 6.05830 6.11356 6.14758 6.28353 6.45833 6.58194 6.78806 6.87994 6.90296 7.03344 7.12074 7.17952 7.42107 7.53313 7.55048 7.65161 7.92305 8.08485 8.18613 8.49786 8.60743 9.03452 9.74599 Molecular weight = 314.17amu Principal moments of inertia in cm(-1) A = 0.024795 B = 0.003123 C = 0.002971 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1128.974000 B = 8963.346311 C = 9423.233684 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.160 4.160 2 C 0.154 3.846 3 N -0.733 5.733 4 C 0.575 3.425 5 O -0.569 6.569 6 C -0.294 4.294 7 C -0.014 4.014 8 C -0.239 4.239 9 C 0.110 3.890 10 C -0.495 4.495 11 H 0.083 0.917 12 C 0.036 3.964 13 N -0.775 5.775 14 Si 1.067 2.933 15 H -0.271 1.271 16 H -0.271 1.271 17 H -0.273 1.273 18 C -0.231 4.231 19 C -0.043 4.043 20 C 0.058 3.942 21 N -0.531 5.531 22 C 0.054 3.946 23 C -0.150 4.150 24 C -0.092 4.092 25 C -0.147 4.147 26 C 0.051 3.949 27 H 0.082 0.918 28 H 0.058 0.942 29 H 0.051 0.949 30 H 0.393 0.607 31 H 0.102 0.898 32 H 0.098 0.902 33 H 0.303 0.697 34 H 0.107 0.893 35 H 0.089 0.911 36 H 0.081 0.919 37 H 0.084 0.916 38 H 0.073 0.927 39 H 0.076 0.924 40 H 0.068 0.932 41 H 0.067 0.933 42 H 0.081 0.919 43 H 0.071 0.929 44 H 0.067 0.933 45 H 0.075 0.925 46 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.211 -14.435 3.361 14.823 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C 0.066 3.934 3 N -0.386 5.386 4 C 0.370 3.630 5 O -0.451 6.451 6 C -0.299 4.299 7 C -0.033 4.033 8 C -0.259 4.259 9 C 0.106 3.894 10 C -0.521 4.521 11 H 0.101 0.899 12 C -0.188 4.188 13 N -0.396 5.396 14 Si 0.889 3.111 15 H -0.196 1.196 16 H -0.197 1.197 17 H -0.198 1.198 18 C -0.250 4.250 19 C -0.062 4.062 20 C -0.071 4.071 21 N -0.251 5.251 22 C -0.075 4.075 23 C -0.189 4.189 24 C -0.111 4.111 25 C -0.186 4.186 26 C -0.077 4.077 27 H 0.101 0.899 28 H 0.077 0.923 29 H 0.070 0.930 30 H 0.229 0.771 31 H 0.121 0.879 32 H 0.117 0.883 33 H 0.117 0.883 34 H 0.125 0.875 35 H 0.107 0.893 36 H 0.100 0.900 37 H 0.103 0.897 38 H 0.092 0.908 39 H 0.094 0.906 40 H 0.087 0.913 41 H 0.085 0.915 42 H 0.100 0.900 43 H 0.090 0.910 44 H 0.086 0.914 45 H 0.093 0.907 46 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 0.666 -13.959 3.321 14.364 hybrid contribution -0.898 -0.440 0.303 1.045 sum -0.231 -14.399 3.624 14.850 Atomic orbital electron populations 1.22278 0.94384 1.01577 1.03596 1.20859 0.94419 0.82467 0.95642 1.46112 1.55307 1.11045 1.26140 1.18453 0.78553 0.85491 0.80514 1.90604 1.40038 1.77734 1.36721 1.18877 1.15550 0.93530 1.01927 1.20390 0.95110 0.92669 0.95174 1.20677 1.06349 0.96125 1.02726 1.17812 0.87558 0.93040 0.90994 1.20879 1.36492 0.97996 0.96768 0.89919 1.27265 0.98564 1.01745 0.91256 1.70390 1.16091 1.23087 1.30057 0.83601 0.75553 0.74369 0.77539 1.19581 1.19664 1.19787 1.20823 1.07435 0.93883 1.02865 1.20400 0.95324 0.95337 0.95133 1.22638 0.97647 0.91152 0.95616 1.62540 1.08121 1.14258 1.40192 1.22174 0.92954 0.99431 0.92916 1.22243 0.95196 1.01933 0.99569 1.21395 0.95715 0.96200 0.97816 1.22296 1.01584 0.95139 0.99631 1.22213 0.97577 0.95101 0.92847 0.89911 0.92343 0.93036 0.77102 0.87943 0.88348 0.88264 0.87454 0.89344 0.90019 0.89718 0.90829 0.90563 0.91340 0.91471 0.90039 0.91047 0.91431 0.90680 0.90786 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.23 7.79 37.16 0.29 -1.94 16 2 C 0.15 2.12 0.52 -131.55 -0.07 2.05 16 3 N -0.73 -11.80 4.68 -48.34 -0.23 -12.02 16 4 C 0.57 11.60 6.82 -12.42 -0.08 11.52 16 5 O -0.57 -12.57 13.36 5.29 0.07 -12.50 16 6 C -0.29 -6.52 5.89 -104.73 -0.62 -7.14 16 7 C -0.01 -0.33 9.52 -39.61 -0.38 -0.71 16 8 C -0.24 -5.75 9.73 -39.27 -0.38 -6.13 16 9 C 0.11 2.75 5.30 -106.80 -0.57 2.18 16 10 C -0.49 -12.30 8.98 -37.75 -0.34 -12.64 16 11 H 0.08 1.99 7.96 -52.49 -0.42 1.57 16 12 C 0.04 0.85 4.94 -17.31 -0.09 0.77 16 13 N -0.77 -19.10 12.30 55.56 0.68 -18.42 16 14 Si 1.07 19.85 30.00 -169.99 -5.10 14.75 16 15 H -0.27 -5.02 7.11 56.52 0.40 -4.62 16 16 H -0.27 -4.89 7.11 56.52 0.40 -4.49 16 17 H -0.27 -4.82 7.11 56.52 0.40 -4.42 16 18 C -0.23 -5.51 7.89 -39.27 -0.31 -5.82 16 19 C -0.04 -0.92 9.47 -39.61 -0.38 -1.30 16 20 C 0.06 0.85 4.57 -3.74 -0.02 0.83 16 21 N -0.53 -6.48 5.22 -234.29 -1.22 -7.70 16 22 C 0.05 0.60 6.09 -3.73 -0.02 0.58 16 23 C -0.15 -1.58 5.58 -26.46 -0.15 -1.73 16 24 C -0.09 -1.01 2.55 -90.02 -0.23 -1.24 16 25 C -0.15 -1.37 5.40 -26.47 -0.14 -1.51 16 26 C 0.05 0.50 6.09 -3.74 -0.02 0.48 16 27 H 0.08 1.40 6.19 -51.93 -0.32 1.07 16 28 H 0.06 0.68 6.41 -51.93 -0.33 0.35 16 29 H 0.05 0.71 8.14 -51.93 -0.42 0.28 16 30 H 0.39 5.87 5.38 -40.82 -0.22 5.65 16 31 H 0.10 2.29 7.63 -52.48 -0.40 1.89 16 32 H 0.10 2.23 8.06 -52.49 -0.42 1.81 16 33 H 0.30 7.70 6.68 -40.82 -0.27 7.42 16 34 H 0.11 2.60 6.48 -52.48 -0.34 2.26 16 35 H 0.09 1.62 6.37 -52.49 -0.33 1.28 16 36 H 0.08 1.22 7.60 -51.93 -0.39 0.82 16 37 H 0.08 1.47 7.03 -51.93 -0.37 1.10 16 38 H 0.07 0.71 8.14 -51.93 -0.42 0.28 16 39 H 0.08 0.93 8.14 -51.92 -0.42 0.51 16 40 H 0.07 0.77 6.91 -51.93 -0.36 0.41 16 41 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 42 H 0.08 0.89 8.14 -51.93 -0.42 0.47 16 43 H 0.07 0.64 6.44 -51.92 -0.33 0.31 16 44 H 0.07 0.55 8.14 -51.93 -0.42 0.12 16 45 H 0.07 0.71 8.14 -51.93 -0.42 0.29 16 46 H 0.07 0.64 8.14 -51.92 -0.42 0.21 16 LS Contribution 348.32 15.07 5.25 5.25 Total: -1.00 -26.85 348.32 -10.74 -37.59 By element: Atomic # 1 Polarization: 21.49 SS G_CDS: -6.69 Total: 14.80 kcal Atomic # 6 Polarization: -18.24 SS G_CDS: -3.50 Total: -21.74 kcal Atomic # 7 Polarization: -37.38 SS G_CDS: -0.77 Total: -38.14 kcal Atomic # 8 Polarization: -12.57 SS G_CDS: 0.07 Total: -12.50 kcal Atomic # 14 Polarization: 19.85 SS G_CDS: -5.10 Total: 14.75 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -26.85 -10.74 -37.59 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000892777472.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.517 kcal (2) G-P(sol) polarization free energy of solvation -26.849 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.738 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.587 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.069 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds