Wall clock time and date at job start Tue Mar 31 2020 10:59:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 C 1.53000 * 109.47157 * 2 1 4 4 C 1.52995 * 109.47298 * 120.00095 * 2 1 3 5 5 C 1.53000 * 109.47048 * 65.00210 * 4 2 1 6 6 N 1.46499 * 109.47049 * 180.02562 * 5 4 2 7 7 C 1.46496 * 120.00439 * 71.13402 * 6 5 4 8 8 C 1.52999 * 109.47366 * 263.74620 * 7 6 5 9 9 C 1.47198 * 109.47604 * 179.97438 * 8 7 6 10 10 N 6.85015 * 87.44910 * 99.27149 * 2 1 3 11 11 C 1.34784 * 119.99652 * 251.13516 * 6 5 4 12 12 O 1.21550 * 119.99705 * 183.40015 * 11 6 5 13 13 C 1.47878 * 120.00133 * 3.39604 * 11 6 5 14 14 C 1.39928 * 120.02112 * 28.87889 * 13 11 6 15 15 C 1.38338 * 120.35393 * 179.74109 * 14 13 11 16 16 C 1.37757 * 120.41163 * 0.55860 * 15 14 13 17 17 C 1.40747 * 120.03862 * 359.69760 * 16 15 14 18 18 C 1.41438 * 120.17419 * 180.02562 * 17 16 15 19 19 H 1.08001 * 120.00149 * 27.36758 * 18 17 16 20 20 C 1.39939 * 119.99885 * 207.35950 * 18 17 16 21 21 N 1.30826 * 119.99745 * 11.86018 * 20 18 17 22 22 Si 1.86799 * 120.00141 * 191.85327 * 20 18 17 23 23 H 1.48491 * 109.47064 * 90.00307 * 22 20 18 24 24 H 1.48496 * 109.47441 * 210.00718 * 22 20 18 25 25 H 1.48504 * 109.46915 * 330.00386 * 22 20 18 26 26 C 1.38995 * 120.02808 * 209.15558 * 13 11 6 27 27 H 1.08999 * 109.46769 * 300.00098 * 1 2 3 28 28 H 1.09002 * 109.47140 * 59.99693 * 1 2 3 29 29 H 1.08996 * 109.47146 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47378 * 240.00352 * 2 1 3 31 31 H 1.09004 * 109.46986 * 180.02562 * 3 2 1 32 32 H 1.09002 * 109.47346 * 300.00181 * 3 2 1 33 33 H 1.08999 * 109.47361 * 60.00265 * 3 2 1 34 34 H 1.08997 * 109.47651 * 304.99763 * 4 2 1 35 35 H 1.09005 * 109.47235 * 184.99563 * 4 2 1 36 36 H 1.08993 * 109.47627 * 60.00161 * 5 4 2 37 37 H 1.09007 * 109.47068 * 299.99597 * 5 4 2 38 38 H 1.09001 * 109.47551 * 143.74749 * 7 6 5 39 39 H 1.09002 * 109.47194 * 23.74478 * 7 6 5 40 40 H 1.09000 * 109.47229 * 300.00430 * 8 7 6 41 41 H 1.09001 * 109.46680 * 59.99595 * 8 7 6 42 42 H 1.07995 * 119.82187 * 359.97438 * 14 13 11 43 43 H 1.07995 * 119.79035 * 180.27974 * 15 14 13 44 44 H 1.07993 * 119.97355 * 179.72224 * 16 15 14 45 45 H 0.97003 * 119.99417 * 179.97438 * 21 20 18 46 46 H 1.07999 * 120.20110 * 359.95245 * 26 13 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 1.2492 5 6 1.6353 -2.1955 1.1878 6 7 2.1231 -2.8860 2.3843 7 6 1.5044 -2.6223 3.6857 8 6 2.3244 -1.5714 4.4368 9 6 1.7025 -1.3060 5.7443 10 7 1.2251 -1.1026 6.7540 11 6 3.1413 -3.7638 2.2876 12 8 3.5054 -4.3826 3.2684 13 6 3.8153 -3.9743 0.9883 14 6 3.8680 -2.9368 0.0508 15 6 4.5014 -3.1244 -1.1647 16 6 5.0774 -4.3377 -1.4709 17 6 5.0297 -5.3946 -0.5426 18 6 5.6207 -6.6413 -0.8538 19 1 6.4520 -6.6882 -1.5417 20 6 5.1284 -7.8141 -0.2703 21 7 3.9897 -7.7962 0.3736 22 14 6.0969 -9.4052 -0.4108 23 1 7.0297 -9.5200 0.7389 24 1 5.1600 -10.5572 -0.4052 25 1 6.8711 -9.4030 -1.6781 26 6 4.3919 -5.2045 0.6950 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 1.8933 -0.5138 -0.8900 31 1 3.1300 1.4425 -0.0005 32 1 1.6766 1.9564 -0.8900 33 1 1.6767 1.9563 0.8900 34 1 1.6055 -0.2618 2.1370 35 1 3.1263 -0.6444 1.2950 36 1 2.0699 -2.6550 0.3002 37 1 0.5489 -2.2724 1.1420 38 1 1.4747 -3.5437 4.2674 39 1 0.4895 -2.2533 3.5375 40 1 3.3394 -1.9403 4.5850 41 1 2.3541 -0.6500 3.8552 42 1 3.4150 -1.9833 0.2789 43 1 4.5406 -2.3160 -1.8797 44 1 5.5662 -4.4778 -2.4236 45 1 3.6483 -8.6092 0.7778 46 1 4.3504 -6.0092 1.4141 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000349401340.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:59:46 Heat of formation + Delta-G solvation = 10.094176 kcal Electronic energy + Delta-G solvation = -26257.934780 eV Core-core repulsion = 22726.482917 eV Total energy + Delta-G solvation = -3531.451863 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 314.174 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -40.04526 -37.35846 -37.11892 -36.69959 -34.92060 -33.80963 -32.05454 -29.88111 -29.58431 -28.88751 -27.27192 -25.53852 -24.53931 -23.51425 -21.51069 -21.09674 -20.06185 -18.91043 -17.68399 -17.52741 -16.34449 -16.08083 -15.57317 -15.18068 -14.90817 -14.78166 -14.45448 -14.12785 -13.85706 -13.60037 -13.21516 -13.13740 -12.91715 -12.77530 -12.58431 -12.51923 -12.36759 -12.24165 -11.96377 -11.77776 -11.65583 -11.34968 -11.21065 -11.15923 -11.06784 -10.94622 -10.71503 -10.68825 -10.43785 -10.25822 -10.06461 -9.66658 -9.28372 -9.04128 -8.47832 -7.64986 -7.48775 -6.80115 -4.46862 2.16984 2.63313 2.71279 2.77217 3.06041 3.08704 3.11270 3.24872 3.66538 3.89724 4.06763 4.55641 4.74712 4.77830 4.83429 4.91739 5.00452 5.18862 5.24835 5.39001 5.47449 5.51720 5.57513 5.62800 5.67484 5.72424 5.77118 5.78994 5.89259 5.97224 6.04310 6.10967 6.14267 6.26145 6.30030 6.41697 6.64410 6.80497 6.95038 6.98684 7.18044 7.34032 7.46685 7.59714 7.70537 7.82130 7.95044 8.13382 8.46574 8.75005 8.78399 8.81130 10.13727 Molecular weight = 314.17amu Principal moments of inertia in cm(-1) A = 0.012796 B = 0.004014 C = 0.003240 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2187.656602 B = 6974.168618 C = 8639.453853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.096 4.096 3 C -0.146 4.146 4 C -0.138 4.138 5 C 0.076 3.924 6 N -0.613 5.613 7 C 0.125 3.875 8 C -0.050 4.050 9 C 0.217 3.783 10 N -0.444 5.444 11 C 0.569 3.431 12 O -0.542 6.542 13 C -0.128 4.128 14 C -0.237 4.237 15 C -0.101 4.101 16 C -0.208 4.208 17 C 0.099 3.901 18 C -0.459 4.459 19 H 0.080 0.920 20 C 0.072 3.928 21 N -0.795 5.795 22 Si 0.913 3.087 23 H -0.267 1.267 24 H -0.277 1.277 25 H -0.262 1.262 26 C -0.090 4.090 27 H 0.051 0.949 28 H 0.052 0.948 29 H 0.059 0.941 30 H 0.077 0.923 31 H 0.056 0.944 32 H 0.052 0.948 33 H 0.051 0.949 34 H 0.064 0.936 35 H 0.075 0.925 36 H 0.130 0.870 37 H 0.065 0.935 38 H 0.088 0.912 39 H 0.082 0.918 40 H 0.115 0.885 41 H 0.110 0.890 42 H 0.122 0.878 43 H 0.093 0.907 44 H 0.095 0.905 45 H 0.283 0.717 46 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.601 12.389 -1.338 13.662 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C -0.115 4.115 3 C -0.204 4.204 4 C -0.176 4.176 5 C -0.046 4.046 6 N -0.346 5.346 7 C 0.000 4.000 8 C -0.091 4.091 9 C -0.101 4.101 10 N -0.121 5.121 11 C 0.361 3.639 12 O -0.420 6.420 13 C -0.131 4.131 14 C -0.256 4.256 15 C -0.119 4.119 16 C -0.228 4.228 17 C 0.097 3.903 18 C -0.489 4.489 19 H 0.098 0.902 20 C -0.145 4.145 21 N -0.420 5.420 22 Si 0.737 3.263 23 H -0.192 1.192 24 H -0.202 1.202 25 H -0.186 1.186 26 C -0.110 4.110 27 H 0.070 0.930 28 H 0.071 0.929 29 H 0.078 0.922 30 H 0.096 0.904 31 H 0.075 0.925 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.082 0.918 35 H 0.094 0.906 36 H 0.147 0.853 37 H 0.084 0.916 38 H 0.106 0.894 39 H 0.101 0.899 40 H 0.133 0.867 41 H 0.128 0.872 42 H 0.139 0.861 43 H 0.111 0.889 44 H 0.113 0.887 45 H 0.094 0.906 46 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -6.295 12.165 0.827 13.722 hybrid contribution 0.488 -0.733 -0.475 1.000 sum -5.807 11.432 0.352 12.827 Atomic orbital electron populations 1.21908 0.95415 1.01969 1.01429 1.21071 0.95743 0.96107 0.98605 1.21832 1.01162 0.95971 1.01415 1.22212 1.01933 0.95484 0.98014 1.22609 0.99494 0.92091 0.90392 1.47781 1.35681 1.43788 1.07322 1.21134 0.95430 0.98415 0.85026 1.19896 1.01059 1.02329 0.85808 1.29047 0.93427 0.92996 0.94661 1.81177 1.09672 1.09237 1.12010 1.19012 0.78361 0.77029 0.89453 1.90705 1.64531 1.47465 1.39288 1.19423 1.04011 0.96772 0.92924 1.21148 1.09394 0.99037 0.96060 1.20480 0.98863 0.96417 0.96126 1.21163 1.07625 0.94999 0.99004 1.17596 0.90185 0.92559 0.89971 1.19607 1.15022 0.90596 1.23638 0.90178 1.25927 0.94233 1.01352 0.93029 1.69747 1.15801 1.30427 1.26021 0.86230 0.80101 0.80076 0.79868 1.19198 1.20235 1.18620 1.21649 0.97823 0.94590 0.96965 0.92953 0.92916 0.92242 0.90426 0.92537 0.92862 0.92980 0.91762 0.90630 0.85267 0.91636 0.89409 0.89940 0.86719 0.87178 0.86073 0.88912 0.88711 0.90602 0.84954 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.18 8.95 37.15 0.33 -0.85 16 2 C -0.10 -0.83 2.91 -90.62 -0.26 -1.10 16 3 C -0.15 -1.15 9.19 37.16 0.34 -0.81 16 4 C -0.14 -1.32 3.44 -26.73 -0.09 -1.41 16 5 C 0.08 0.91 4.61 -4.04 -0.02 0.90 16 6 N -0.61 -8.81 2.56 -174.79 -0.45 -9.26 16 7 C 0.13 1.47 5.09 -4.04 -0.02 1.44 16 8 C -0.05 -0.50 5.84 -29.52 -0.17 -0.67 16 9 C 0.22 2.58 15.43 -20.78 -0.32 2.26 16 10 N -0.44 -6.42 18.53 42.12 0.78 -5.64 16 11 C 0.57 11.17 7.40 -12.31 -0.09 11.08 16 12 O -0.54 -12.29 16.34 5.32 0.09 -12.21 16 13 C -0.13 -2.76 5.48 -105.04 -0.58 -3.33 16 14 C -0.24 -4.41 7.41 -38.91 -0.29 -4.70 16 15 C -0.10 -1.95 10.01 -39.72 -0.40 -2.34 16 16 C -0.21 -4.63 9.78 -38.81 -0.38 -5.01 16 17 C 0.10 2.49 5.56 -106.87 -0.59 1.90 16 18 C -0.46 -11.65 9.07 -37.73 -0.34 -11.99 16 19 H 0.08 1.94 7.87 -52.49 -0.41 1.53 16 20 C 0.07 1.77 5.24 -17.34 -0.09 1.68 16 21 N -0.79 -20.24 10.80 55.55 0.60 -19.64 16 22 Si 0.91 18.38 29.58 -169.99 -5.03 13.35 16 23 H -0.27 -5.38 7.11 56.52 0.40 -4.97 16 24 H -0.28 -5.48 7.11 56.52 0.40 -5.08 16 25 H -0.26 -5.17 7.11 56.52 0.40 -4.76 16 26 C -0.09 -2.26 8.21 -38.44 -0.32 -2.58 16 27 H 0.05 0.39 8.14 -51.93 -0.42 -0.04 16 28 H 0.05 0.39 8.14 -51.93 -0.42 -0.03 16 29 H 0.06 0.48 6.56 -51.93 -0.34 0.14 16 30 H 0.08 0.74 8.14 -51.93 -0.42 0.32 16 31 H 0.06 0.46 8.14 -51.93 -0.42 0.03 16 32 H 0.05 0.39 8.14 -51.93 -0.42 -0.03 16 33 H 0.05 0.38 8.14 -51.93 -0.42 -0.04 16 34 H 0.06 0.52 6.40 -51.93 -0.33 0.19 16 35 H 0.08 0.80 6.88 -51.93 -0.36 0.44 16 36 H 0.13 1.86 4.07 -51.93 -0.21 1.65 16 37 H 0.07 0.69 6.56 -51.93 -0.34 0.34 16 38 H 0.09 1.19 7.57 -51.93 -0.39 0.80 16 39 H 0.08 0.76 8.02 -51.93 -0.42 0.34 16 40 H 0.11 1.30 8.14 -51.93 -0.42 0.88 16 41 H 0.11 0.87 6.08 -51.93 -0.32 0.55 16 42 H 0.12 1.82 3.01 -52.49 -0.16 1.66 16 43 H 0.09 1.51 8.06 -52.49 -0.42 1.08 16 44 H 0.09 1.98 8.06 -52.49 -0.42 1.56 16 45 H 0.28 6.65 8.30 -40.82 -0.34 6.31 16 46 H 0.13 3.65 5.99 -52.49 -0.31 3.33 16 LS Contribution 373.16 15.07 5.62 5.62 Total: -1.00 -28.90 373.16 -8.20 -37.10 By element: Atomic # 1 Polarization: 12.74 SS G_CDS: -6.53 Total: 6.20 kcal Atomic # 6 Polarization: -12.25 SS G_CDS: -3.29 Total: -15.53 kcal Atomic # 7 Polarization: -35.47 SS G_CDS: 0.93 Total: -34.54 kcal Atomic # 8 Polarization: -12.29 SS G_CDS: 0.09 Total: -12.21 kcal Atomic # 14 Polarization: 18.38 SS G_CDS: -5.03 Total: 13.35 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -28.90 -8.20 -37.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000349401340.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.194 kcal (2) G-P(sol) polarization free energy of solvation -28.896 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.204 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.099 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.094 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds