Wall clock time and date at job start Tue Mar 31 2020 10:30:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53007 * 1 3 3 C 1.53000 * 109.46987 * 2 1 4 4 C 1.53002 * 109.46873 * 299.99480 * 3 2 1 5 5 C 1.52995 * 109.47071 * 59.99748 * 3 2 1 6 6 C 1.50695 * 109.46792 * 179.97438 * 3 2 1 7 7 N 1.29949 * 126.29151 * 359.68824 * 6 3 2 8 8 O 1.21295 * 110.25124 * 179.84314 * 7 6 3 9 9 C 1.33643 * 109.81525 * 0.42157 * 8 7 6 10 10 C 1.50693 * 126.55611 * 179.75665 * 9 8 7 11 11 C 1.53004 * 109.47365 * 269.98038 * 10 9 8 12 12 H 1.09002 * 109.47065 * 304.99327 * 11 10 9 13 13 C 1.50694 * 109.47126 * 65.00062 * 11 10 9 14 14 H 1.07999 * 120.00305 * 31.95980 * 13 11 10 15 15 C 1.37878 * 119.99872 * 211.96712 * 13 11 10 16 16 N 1.31516 * 120.00087 * 5.57833 * 15 13 11 17 17 Si 1.86798 * 120.00029 * 185.59059 * 15 13 11 18 18 H 1.48494 * 109.47548 * 89.99484 * 17 15 13 19 19 H 1.48506 * 109.46974 * 209.99581 * 17 15 13 20 20 H 1.48498 * 109.47146 * 329.99137 * 17 15 13 21 21 C 1.50702 * 109.46921 * 184.99715 * 11 10 9 22 22 C 1.38233 * 120.00195 * 296.09689 * 21 11 10 23 23 C 1.38233 * 119.99818 * 179.79097 * 22 21 11 24 24 C 1.38239 * 119.99909 * 0.44097 * 23 22 21 25 25 C 1.38230 * 120.00355 * 359.81406 * 24 23 22 26 26 C 1.38230 * 119.99623 * 359.97433 * 25 24 23 27 27 N 1.31135 * 106.89596 * 359.74197 * 9 8 7 28 28 H 1.08998 * 109.46690 * 180.02562 * 1 2 3 29 29 H 1.08992 * 109.47219 * 299.99934 * 1 2 3 30 30 H 1.08997 * 109.47107 * 60.00588 * 1 2 3 31 31 H 1.08996 * 109.47044 * 239.99571 * 2 1 3 32 32 H 1.09001 * 109.46904 * 119.99856 * 2 1 3 33 33 H 1.08999 * 109.47043 * 179.97438 * 4 3 2 34 34 H 1.09008 * 109.46542 * 60.00568 * 4 3 2 35 35 H 1.08996 * 109.47360 * 300.00552 * 4 3 2 36 36 H 1.08995 * 109.47435 * 299.99676 * 5 3 2 37 37 H 1.08997 * 109.47429 * 60.00339 * 5 3 2 38 38 H 1.09010 * 109.47085 * 179.97438 * 5 3 2 39 39 H 1.09004 * 109.46975 * 29.97889 * 10 9 8 40 40 H 1.09002 * 109.47468 * 149.97437 * 10 9 8 41 41 H 0.96999 * 120.00355 * 180.02562 * 16 15 13 42 42 H 1.07992 * 120.00155 * 359.97438 * 22 21 11 43 43 H 1.08002 * 120.00023 * 180.27618 * 23 22 21 44 44 H 1.08005 * 119.99420 * 179.83442 * 24 23 22 45 45 H 1.07997 * 120.00340 * 180.02562 * 25 24 23 46 46 H 1.08003 * 120.00178 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 1.5301 2.1637 -1.2493 5 6 1.5300 2.1637 1.2492 6 6 3.5470 1.4425 0.0006 7 7 4.3161 0.3950 0.0068 8 8 5.4818 0.7301 0.0023 9 6 5.5699 2.0637 0.0018 10 6 6.8369 2.8795 0.0020 11 6 7.2649 3.1566 1.4446 12 1 6.4434 3.6296 1.9827 13 6 7.6264 1.8587 2.1194 14 1 8.0569 1.0524 1.5441 15 6 7.4075 1.7004 3.4715 16 7 6.7838 2.6379 4.1509 17 14 7.9972 0.1544 4.3384 18 1 9.3794 0.3641 4.8391 19 1 7.0972 -0.1464 5.4807 20 1 7.9836 -0.9837 3.3846 21 6 8.4607 4.0738 1.4463 22 6 9.6547 3.6539 0.8905 23 6 10.7502 4.4969 0.8883 24 6 10.6544 5.7564 1.4501 25 6 9.4619 6.1743 2.0106 26 6 8.3651 5.3330 2.0089 27 7 4.3430 2.5266 0.0008 28 1 -0.3632 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8899 30 1 -0.3633 0.5137 -0.8900 31 1 1.8934 -0.5139 -0.8899 32 1 1.8934 -0.5138 0.8900 33 1 1.8930 3.1915 -1.2491 34 1 0.4400 2.1636 -1.2493 35 1 1.8934 1.6498 -2.1393 36 1 0.4400 2.1638 1.2491 37 1 1.8933 1.6500 2.1392 38 1 1.8937 3.1914 1.2494 39 1 7.6245 2.3275 -0.5110 40 1 6.6610 3.8241 -0.5127 41 1 6.6301 2.5267 5.1021 42 1 9.7307 2.6685 0.4554 43 1 11.6818 4.1705 0.4501 44 1 11.5112 6.4139 1.4507 45 1 9.3869 7.1584 2.4491 46 1 7.4333 5.6596 2.4464 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000867171365.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:30:42 Heat of formation + Delta-G solvation = 63.323293 kcal Electronic energy + Delta-G solvation = -26353.639629 eV Core-core repulsion = 22824.495954 eV Total energy + Delta-G solvation = -3529.143675 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 314.174 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -44.78340 -38.52261 -37.95111 -35.22751 -34.23075 -32.19347 -31.08462 -30.08807 -30.04983 -28.52549 -27.24337 -25.75417 -25.01202 -23.13765 -22.65192 -21.84067 -21.40154 -19.82631 -18.67106 -17.25620 -16.69431 -16.57574 -15.93346 -15.32785 -14.72731 -14.66264 -14.32144 -14.09258 -13.99347 -13.69127 -13.31373 -12.96925 -12.59757 -12.47818 -12.27584 -12.24803 -12.09255 -11.80025 -11.79145 -11.65553 -11.26920 -11.01677 -11.00739 -10.99672 -10.91162 -10.75393 -10.68962 -10.44910 -10.35094 -10.20845 -10.15560 -9.67915 -9.29792 -9.02460 -8.58986 -8.11953 -7.73811 -6.17053 -4.21685 1.94653 2.21329 2.26602 2.95438 3.25835 3.32700 3.36296 3.69139 4.07839 4.33806 4.51048 4.65438 4.93825 5.00756 5.09154 5.20140 5.32428 5.41068 5.58235 5.60577 5.65721 5.73935 5.75229 5.80117 5.82454 5.91883 5.96256 5.97981 6.04349 6.06982 6.14591 6.19879 6.20178 6.32161 6.37612 6.41573 6.44578 6.51848 6.66178 6.76444 6.81405 6.93173 7.24168 7.29643 7.38624 7.69822 7.79282 7.89146 8.13897 8.84994 8.94207 9.43992 10.90977 Molecular weight = 314.17amu Principal moments of inertia in cm(-1) A = 0.014073 B = 0.004158 C = 0.003616 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1989.175926 B = 6732.810370 C = 7741.586096 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C -0.111 4.111 3 C 0.033 3.967 4 C -0.136 4.136 5 C -0.139 4.139 6 C 0.171 3.829 7 N -0.399 5.399 8 O 0.080 5.920 9 C 0.236 3.764 10 C -0.021 4.021 11 C 0.070 3.930 12 H 0.075 0.925 13 C -0.518 4.518 14 H 0.062 0.938 15 C 0.074 3.926 16 N -0.879 5.879 17 Si 0.887 3.113 18 H -0.278 1.278 19 H -0.287 1.287 20 H -0.270 1.270 21 C -0.025 4.025 22 C -0.112 4.112 23 C -0.131 4.131 24 C -0.151 4.151 25 C -0.128 4.128 26 C -0.117 4.117 27 N -0.498 5.498 28 H 0.054 0.946 29 H 0.059 0.941 30 H 0.058 0.942 31 H 0.065 0.935 32 H 0.068 0.932 33 H 0.066 0.934 34 H 0.067 0.933 35 H 0.053 0.947 36 H 0.066 0.934 37 H 0.057 0.943 38 H 0.067 0.933 39 H 0.086 0.914 40 H 0.086 0.914 41 H 0.263 0.737 42 H 0.117 0.883 43 H 0.107 0.893 44 H 0.105 0.895 45 H 0.107 0.893 46 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.583 1.498 -8.492 10.272 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.210 4.210 2 C -0.149 4.149 3 C 0.031 3.969 4 C -0.194 4.194 5 C -0.197 4.197 6 C -0.102 4.102 7 N -0.108 5.108 8 O 0.023 5.977 9 C 0.017 3.983 10 C -0.060 4.060 11 C 0.051 3.949 12 H 0.094 0.906 13 C -0.555 4.555 14 H 0.081 0.919 15 C -0.130 4.130 16 N -0.515 5.515 17 Si 0.714 3.286 18 H -0.204 1.204 19 H -0.213 1.213 20 H -0.195 1.195 21 C -0.025 4.025 22 C -0.130 4.130 23 C -0.149 4.149 24 C -0.170 4.170 25 C -0.146 4.146 26 C -0.135 4.135 27 N -0.232 5.232 28 H 0.073 0.927 29 H 0.078 0.922 30 H 0.077 0.923 31 H 0.084 0.916 32 H 0.086 0.914 33 H 0.085 0.915 34 H 0.086 0.914 35 H 0.072 0.928 36 H 0.085 0.915 37 H 0.076 0.924 38 H 0.086 0.914 39 H 0.105 0.895 40 H 0.105 0.895 41 H 0.073 0.927 42 H 0.135 0.865 43 H 0.125 0.875 44 H 0.123 0.877 45 H 0.125 0.875 46 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges -6.268 1.025 -8.300 10.451 hybrid contribution 0.749 -0.803 0.957 1.457 sum -5.519 0.222 -7.342 9.188 Atomic orbital electron populations 1.21890 0.95356 1.01653 1.02115 1.21497 0.95810 0.94521 1.03049 1.18840 0.83436 0.96992 0.97608 1.21869 1.00924 1.00949 0.95702 1.21880 1.00658 1.01203 0.95920 1.25488 0.99137 0.84293 1.01309 1.74498 0.89731 1.24290 1.22312 1.85261 1.21609 1.25322 1.65488 1.28647 0.96566 0.81615 0.91517 1.20563 0.87245 0.95773 1.02457 1.18044 0.93003 0.95225 0.88675 0.90635 1.20965 1.43041 0.97890 0.93631 0.91934 1.24935 0.93967 0.96347 0.97758 1.69905 1.39445 1.33726 1.08464 0.86653 0.78842 0.83607 0.79482 1.20358 1.21275 1.19476 1.20523 0.96771 0.92607 0.92635 1.20979 0.92695 0.98924 1.00442 1.20997 0.98194 0.94636 1.01113 1.20839 0.97384 0.96777 1.01957 1.20989 0.93716 0.99258 1.00668 1.21098 0.98373 0.94034 1.00037 1.71774 0.99716 1.29121 1.22543 0.92708 0.92218 0.92346 0.91582 0.91373 0.91489 0.91446 0.92802 0.91544 0.92408 0.91379 0.89522 0.89546 0.92687 0.86518 0.87468 0.87673 0.87501 0.86708 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.53 9.21 37.16 0.34 -1.19 16 2 C -0.11 -1.47 4.49 -26.73 -0.12 -1.59 16 3 C 0.03 0.49 0.77 -155.66 -0.12 0.37 16 4 C -0.14 -1.69 8.10 37.16 0.30 -1.39 16 5 C -0.14 -1.96 8.10 37.15 0.30 -1.66 16 6 C 0.17 3.24 6.40 -156.37 -1.00 2.24 16 7 N -0.40 -8.18 11.47 30.90 0.35 -7.83 16 8 O 0.08 1.69 11.31 18.10 0.20 1.90 16 9 C 0.24 4.81 7.20 -13.06 -0.09 4.72 16 10 C -0.02 -0.39 5.09 -27.88 -0.14 -0.54 16 11 C 0.07 1.57 2.06 -92.92 -0.19 1.37 16 12 H 0.08 1.93 7.06 -51.93 -0.37 1.57 16 13 C -0.52 -12.95 7.21 -34.44 -0.25 -13.20 16 14 H 0.06 1.55 7.82 -52.49 -0.41 1.14 16 15 C 0.07 1.97 5.45 -17.82 -0.10 1.88 16 16 N -0.88 -24.43 12.81 55.43 0.71 -23.72 16 17 Si 0.89 21.11 29.54 -169.99 -5.02 16.09 16 18 H -0.28 -6.56 7.11 56.52 0.40 -6.16 16 19 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 20 H -0.27 -6.39 7.11 56.52 0.40 -5.98 16 21 C -0.02 -0.51 4.77 -104.62 -0.50 -1.01 16 22 C -0.11 -2.12 8.86 -39.58 -0.35 -2.48 16 23 C -0.13 -2.22 10.05 -39.58 -0.40 -2.62 16 24 C -0.15 -2.50 10.05 -39.58 -0.40 -2.89 16 25 C -0.13 -2.24 10.05 -39.59 -0.40 -2.64 16 26 C -0.12 -2.34 9.67 -39.58 -0.38 -2.72 16 27 N -0.50 -10.07 11.55 -9.87 -0.11 -10.19 16 28 H 0.05 0.50 8.14 -51.93 -0.42 0.07 16 29 H 0.06 0.57 6.43 -51.93 -0.33 0.23 16 30 H 0.06 0.52 6.43 -51.93 -0.33 0.18 16 31 H 0.07 0.89 8.14 -51.93 -0.42 0.47 16 32 H 0.07 1.00 8.14 -51.93 -0.42 0.58 16 33 H 0.07 0.88 8.14 -51.93 -0.42 0.45 16 34 H 0.07 0.66 6.43 -51.92 -0.33 0.33 16 35 H 0.05 0.66 8.14 -51.93 -0.42 0.24 16 36 H 0.07 0.74 6.43 -51.93 -0.33 0.40 16 37 H 0.06 0.91 8.14 -51.93 -0.42 0.48 16 38 H 0.07 1.03 8.14 -51.92 -0.42 0.61 16 39 H 0.09 1.46 7.81 -51.93 -0.41 1.06 16 40 H 0.09 1.46 8.14 -51.93 -0.42 1.03 16 41 H 0.26 7.09 8.31 -40.82 -0.34 6.75 16 42 H 0.12 2.10 7.77 -52.49 -0.41 1.69 16 43 H 0.11 1.52 8.06 -52.49 -0.42 1.10 16 44 H 0.11 1.44 8.06 -52.48 -0.42 1.02 16 45 H 0.11 1.60 8.06 -52.49 -0.42 1.18 16 46 H 0.11 2.32 7.95 -52.48 -0.42 1.90 16 LS Contribution 377.29 15.07 5.69 5.69 Total: -1.00 -28.74 377.29 -8.81 -37.54 By element: Atomic # 1 Polarization: 10.99 SS G_CDS: -7.13 Total: 3.86 kcal Atomic # 6 Polarization: -19.85 SS G_CDS: -3.50 Total: -23.34 kcal Atomic # 7 Polarization: -42.68 SS G_CDS: 0.95 Total: -41.73 kcal Atomic # 8 Polarization: 1.69 SS G_CDS: 0.20 Total: 1.90 kcal Atomic # 14 Polarization: 21.11 SS G_CDS: -5.02 Total: 16.09 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -28.74 -8.81 -37.54 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000867171365.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.868 kcal (2) G-P(sol) polarization free energy of solvation -28.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 72.128 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.805 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.545 kcal (6) G-S(sol) free energy of system = (1) + (5) 63.323 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds