Wall clock time and date at job start Tue Mar 31 2020 10:46:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17396 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46508 * 109.47167 * 64.77542 * 3 2 1 5 5 C 1.36906 * 119.99748 * 288.73424 * 4 3 2 6 6 H 1.08002 * 119.99320 * 165.65738 * 5 4 3 7 7 C 1.39009 * 120.00651 * 345.65605 * 5 4 3 8 8 N 1.31394 * 119.99661 * 36.86347 * 7 5 4 9 9 Si 1.86793 * 120.00394 * 216.86700 * 7 5 4 10 10 H 1.48498 * 109.47140 * 59.99711 * 9 7 5 11 11 H 1.48504 * 109.47482 * 180.02562 * 9 7 5 12 12 H 1.48506 * 109.47116 * 299.99656 * 9 7 5 13 13 C 1.34769 * 119.99687 * 108.73208 * 4 3 2 14 14 O 1.21636 * 119.99876 * 186.49319 * 13 4 3 15 15 C 1.47416 * 120.00158 * 6.49103 * 13 4 3 16 16 C 1.39864 * 120.07384 * 140.87166 * 15 13 4 17 17 C 1.37589 * 119.92547 * 180.02562 * 16 15 13 18 18 C 1.39229 * 120.07268 * 0.02562 * 17 16 15 19 19 N 1.39060 * 119.92601 * 179.97438 * 18 17 16 20 20 C 1.46502 * 119.99710 * 359.97438 * 19 18 17 21 21 C 1.52997 * 109.47167 * 270.00204 * 20 19 18 22 22 C 1.46497 * 120.00293 * 179.97438 * 19 18 17 23 23 C 1.53000 * 109.47466 * 270.00174 * 22 19 18 24 24 C 1.52998 * 109.47186 * 180.02562 * 23 22 19 25 25 C 1.39239 * 120.15219 * 0.24808 * 18 17 16 26 26 C 1.37589 * 120.07145 * 359.45219 * 25 18 17 27 27 H 4.40640 * 5.51521 * 180.02562 * 4 1 2 28 28 H 1.09003 * 109.47120 * 304.78346 * 3 2 1 29 29 H 1.08996 * 109.47017 * 184.77787 * 3 2 1 30 30 H 0.97003 * 120.00052 * 180.02562 * 8 7 5 31 31 H 1.08009 * 120.03491 * 0.02562 * 16 15 13 32 32 H 1.08000 * 119.96556 * 179.97438 * 17 16 15 33 33 H 1.09006 * 109.47089 * 149.99630 * 20 19 18 34 34 H 1.09007 * 109.47040 * 30.00193 * 20 19 18 35 35 H 1.09001 * 109.47161 * 180.02562 * 21 20 19 36 36 H 1.08999 * 109.46796 * 299.99955 * 21 20 19 37 37 H 1.08992 * 109.47129 * 59.99987 * 21 20 19 38 38 H 1.09007 * 109.46771 * 30.00664 * 22 19 18 39 39 H 1.08999 * 109.47103 * 150.00055 * 22 19 18 40 40 H 1.08995 * 109.46875 * 300.00153 * 23 22 19 41 41 H 1.08999 * 109.47057 * 59.99853 * 23 22 19 42 42 H 1.09004 * 109.46722 * 299.99869 * 24 23 22 43 43 H 1.08999 * 109.47284 * 59.99941 * 24 23 22 44 44 H 1.09001 * 109.47144 * 180.02562 * 24 23 22 45 45 H 1.07994 * 119.96032 * 179.72494 * 25 18 17 46 46 H 1.07997 * 120.03583 * 180.24978 * 26 25 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1346 -0.5878 -1.2496 5 6 3.0043 -1.9327 -1.4697 6 1 3.1448 -2.3334 -2.4627 7 6 2.6913 -2.7826 -0.4152 8 7 1.8600 -2.3874 0.5225 9 14 3.4524 -4.4864 -0.3310 10 1 4.9311 -4.3654 -0.2674 11 1 2.9602 -5.1893 0.8810 12 1 3.0705 -5.2594 -1.5402 13 6 3.7122 0.1949 -2.1823 14 8 4.0106 -0.2696 -3.2661 15 6 3.9824 1.6142 -1.8890 16 6 5.1657 2.2096 -2.3377 17 6 5.4150 3.5343 -2.0618 18 6 4.4911 4.2817 -1.3364 19 7 4.7465 5.6202 -1.0588 20 6 5.9868 6.2421 -1.5291 21 6 7.0743 6.0790 -0.4655 22 6 3.7752 6.4084 -0.2962 23 6 2.7813 7.0624 -1.2580 24 6 1.7674 7.8861 -0.4615 25 6 3.3147 3.6906 -0.8833 26 6 3.0563 2.3680 -1.1610 27 1 -1.0499 0.0001 -0.0003 28 1 3.0096 -0.5854 0.8441 29 1 3.0088 1.0249 0.0856 30 1 1.6418 -2.9803 1.2586 31 1 5.8830 1.6302 -2.9002 32 1 6.3288 3.9947 -2.4076 33 1 5.8144 7.3027 -1.7130 34 1 6.3070 5.7606 -2.4531 35 1 7.9970 6.5421 -0.8152 36 1 6.7540 6.5605 0.4584 37 1 7.2466 5.0186 -0.2817 38 1 3.2387 5.7559 0.3927 39 1 4.2973 7.1813 0.2678 40 1 3.3179 7.7148 -1.9468 41 1 2.2592 6.2895 -1.8220 42 1 1.2307 7.2339 0.2276 43 1 2.2898 8.6590 0.1021 44 1 1.0590 8.3516 -1.1467 45 1 2.6023 4.2721 -0.3171 46 1 2.1418 1.9112 -0.8127 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000281021581.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:46:33 Heat of formation + Delta-G solvation = 83.791758 kcal Electronic energy + Delta-G solvation = -26140.441174 eV Core-core repulsion = 22612.185078 eV Total energy + Delta-G solvation = -3528.256096 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 314.174 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -39.87119 -38.51880 -36.35387 -35.16152 -33.95517 -32.19979 -31.37185 -31.23308 -30.37255 -28.87856 -26.56341 -25.95239 -24.77359 -23.41294 -22.31503 -21.59950 -20.51295 -19.27754 -17.94496 -17.43055 -16.48600 -16.31931 -15.92443 -15.07776 -14.86738 -14.58172 -14.39467 -14.21058 -14.10147 -13.67613 -13.58077 -13.17671 -13.10987 -12.95521 -12.57288 -12.35267 -12.14480 -12.02369 -11.97058 -11.79175 -11.66546 -11.49468 -11.36868 -11.11968 -10.88827 -10.86005 -10.54324 -10.29782 -10.23861 -9.57043 -9.33937 -9.09256 -8.65720 -8.44622 -8.31844 -7.99663 -7.04201 -6.44827 -3.69936 1.72482 1.83842 3.09431 3.20592 3.28346 3.34111 3.73109 3.94824 4.08925 4.22658 4.46401 4.66613 4.74493 4.80646 4.88409 5.05849 5.10081 5.15513 5.16332 5.20816 5.30648 5.34051 5.43007 5.56785 5.58048 5.63604 5.67699 5.74814 5.80714 5.85662 5.87813 5.90778 6.03947 6.06659 6.13705 6.32480 6.44486 6.54654 6.76271 6.86779 7.04785 7.11061 7.13539 7.37428 7.54287 7.68006 8.12567 8.47127 8.91842 9.17088 9.39993 9.99964 10.54348 Molecular weight = 314.17amu Principal moments of inertia in cm(-1) A = 0.017859 B = 0.003537 C = 0.003179 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1567.490993 B = 7913.594243 C = 8805.359553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.262 4.262 2 C -0.102 4.102 3 C 0.202 3.798 4 N -0.429 5.429 5 C -0.329 4.329 6 H 0.109 0.891 7 C 0.049 3.951 8 N -0.833 5.833 9 Si 0.903 3.097 10 H -0.272 1.272 11 H -0.286 1.286 12 H -0.272 1.272 13 C 0.483 3.517 14 O -0.588 6.588 15 C -0.151 4.151 16 C -0.031 4.031 17 C -0.205 4.205 18 C 0.217 3.783 19 N -0.628 5.628 20 C 0.120 3.880 21 C -0.173 4.173 22 C 0.124 3.876 23 C -0.145 4.145 24 C -0.150 4.150 25 C -0.203 4.203 26 C -0.063 4.063 27 H 0.198 0.802 28 H 0.097 0.903 29 H 0.091 0.909 30 H 0.270 0.730 31 H 0.125 0.875 32 H 0.120 0.880 33 H 0.069 0.931 34 H 0.076 0.924 35 H 0.060 0.940 36 H 0.053 0.947 37 H 0.061 0.939 38 H 0.077 0.923 39 H 0.069 0.931 40 H 0.060 0.940 41 H 0.068 0.932 42 H 0.056 0.944 43 H 0.052 0.948 44 H 0.055 0.945 45 H 0.120 0.880 46 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.969 19.734 3.179 20.379 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.280 4.280 2 C -0.104 4.104 3 C 0.079 3.921 4 N -0.146 5.146 5 C -0.456 4.456 6 H 0.126 0.874 7 C -0.159 4.159 8 N -0.468 5.468 9 Si 0.729 3.271 10 H -0.198 1.198 11 H -0.212 1.212 12 H -0.197 1.197 13 C 0.274 3.726 14 O -0.474 6.474 15 C -0.156 4.156 16 C -0.050 4.050 17 C -0.227 4.227 18 C 0.116 3.884 19 N -0.339 5.339 20 C -0.004 4.004 21 C -0.231 4.231 22 C 0.000 4.000 23 C -0.184 4.184 24 C -0.208 4.208 25 C -0.225 4.225 26 C -0.083 4.083 27 H 0.215 0.785 28 H 0.115 0.885 29 H 0.108 0.892 30 H 0.081 0.919 31 H 0.143 0.857 32 H 0.138 0.862 33 H 0.087 0.913 34 H 0.094 0.906 35 H 0.079 0.921 36 H 0.073 0.927 37 H 0.080 0.920 38 H 0.095 0.905 39 H 0.087 0.913 40 H 0.079 0.921 41 H 0.087 0.913 42 H 0.075 0.925 43 H 0.071 0.929 44 H 0.074 0.926 45 H 0.138 0.862 46 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 4.061 19.559 2.886 20.184 hybrid contribution -0.119 -0.972 0.298 1.024 sum 3.942 18.587 3.184 19.265 Atomic orbital electron populations 1.24197 0.95283 1.06140 1.02429 1.22827 0.94003 0.95356 0.98188 1.19136 0.84681 0.98374 0.89870 1.43661 1.48819 1.07524 1.14602 1.19489 1.49011 0.80100 0.96963 0.87371 1.25247 0.94837 1.00100 0.95669 1.70304 1.24946 1.38254 1.13311 0.86367 0.80659 0.82382 0.77703 1.19780 1.21171 1.19744 1.17712 0.84536 0.85113 0.85250 1.90604 1.58517 1.75038 1.23272 1.19987 0.96721 0.95376 1.03526 1.20884 0.95427 0.93430 0.95295 1.20514 1.00761 0.94710 1.06689 1.17842 0.93591 0.83479 0.93454 1.46388 1.20079 1.07540 1.59853 1.21343 0.84102 0.97696 0.97227 1.22234 0.98482 1.02788 0.99624 1.21443 0.90348 0.94729 0.93446 1.21992 0.97532 0.99807 0.99057 1.21707 0.98937 0.99861 1.00293 1.20538 0.98125 0.95725 1.08131 1.21528 0.99115 0.92990 0.94618 0.78481 0.88482 0.89214 0.91943 0.85667 0.86215 0.91308 0.90594 0.92064 0.92744 0.91973 0.90505 0.91285 0.92122 0.91310 0.92452 0.92858 0.92598 0.86175 0.84508 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.26 -5.58 19.24 29.55 0.57 -5.01 16 2 C -0.10 -2.35 9.63 -37.12 -0.36 -2.71 16 3 C 0.20 4.63 4.80 -6.82 -0.03 4.60 16 4 N -0.43 -11.25 2.68 -119.16 -0.32 -11.56 16 5 C -0.33 -9.32 9.09 -15.00 -0.14 -9.46 16 6 H 0.11 3.26 7.43 -52.49 -0.39 2.87 16 7 C 0.05 1.28 5.01 -17.45 -0.09 1.19 16 8 N -0.83 -21.64 9.03 55.50 0.50 -21.14 16 9 Si 0.90 20.59 29.68 -169.99 -5.04 15.54 16 10 H -0.27 -6.25 7.11 56.52 0.40 -5.85 16 11 H -0.29 -6.34 7.11 56.52 0.40 -5.94 16 12 H -0.27 -6.25 7.11 56.52 0.40 -5.85 16 13 C 0.48 12.43 7.29 -12.53 -0.09 12.34 16 14 O -0.59 -17.08 16.53 5.25 0.09 -17.00 16 15 C -0.15 -3.14 5.40 -104.95 -0.57 -3.71 16 16 C -0.03 -0.55 9.62 -39.21 -0.38 -0.93 16 17 C -0.20 -3.04 9.18 -39.45 -0.36 -3.40 16 18 C 0.22 3.05 6.55 -83.84 -0.55 2.50 16 19 N -0.63 -6.82 2.59 -171.74 -0.44 -7.26 16 20 C 0.12 1.05 5.86 -4.04 -0.02 1.02 16 21 C -0.17 -1.41 10.24 37.16 0.38 -1.03 16 22 C 0.12 1.11 5.15 -4.04 -0.02 1.09 16 23 C -0.14 -1.25 6.26 -26.73 -0.17 -1.41 16 24 C -0.15 -1.07 9.91 37.16 0.37 -0.70 16 25 C -0.20 -3.06 9.18 -39.45 -0.36 -3.43 16 26 C -0.06 -1.15 7.33 -39.21 -0.29 -1.44 16 27 H 0.20 3.44 7.80 -54.10 -0.42 3.02 16 28 H 0.10 2.33 6.59 -51.93 -0.34 1.99 16 29 H 0.09 1.81 3.79 -51.93 -0.20 1.61 16 30 H 0.27 6.67 8.31 -40.82 -0.34 6.33 16 31 H 0.13 2.27 8.05 -52.48 -0.42 1.84 16 32 H 0.12 1.48 6.11 -52.49 -0.32 1.16 16 33 H 0.07 0.49 8.07 -51.93 -0.42 0.08 16 34 H 0.08 0.68 6.17 -51.92 -0.32 0.36 16 35 H 0.06 0.40 8.14 -51.93 -0.42 -0.02 16 36 H 0.05 0.44 8.14 -51.93 -0.42 0.01 16 37 H 0.06 0.61 8.14 -51.93 -0.42 0.19 16 38 H 0.08 0.72 6.16 -51.93 -0.32 0.40 16 39 H 0.07 0.52 8.07 -51.93 -0.42 0.10 16 40 H 0.06 0.51 8.14 -51.93 -0.42 0.09 16 41 H 0.07 0.72 8.14 -51.93 -0.42 0.30 16 42 H 0.06 0.41 8.14 -51.93 -0.42 -0.01 16 43 H 0.05 0.33 8.14 -51.93 -0.42 -0.09 16 44 H 0.05 0.39 8.14 -51.93 -0.42 -0.04 16 45 H 0.12 1.55 6.10 -52.49 -0.32 1.23 16 46 H 0.14 2.59 4.65 -52.49 -0.24 2.35 16 LS Contribution 374.01 15.07 5.64 5.64 Total: -1.00 -31.79 374.01 -8.34 -40.13 By element: Atomic # 1 Polarization: 12.78 SS G_CDS: -6.65 Total: 6.13 kcal Atomic # 6 Polarization: -8.37 SS G_CDS: -2.10 Total: -10.48 kcal Atomic # 7 Polarization: -39.70 SS G_CDS: -0.26 Total: -39.96 kcal Atomic # 8 Polarization: -17.08 SS G_CDS: 0.09 Total: -17.00 kcal Atomic # 14 Polarization: 20.59 SS G_CDS: -5.04 Total: 15.54 kcal Total LS contribution 5.64 Total: 5.64 kcal Total: -31.79 -8.34 -40.13 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000281021581.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.924 kcal (2) G-P(sol) polarization free energy of solvation -31.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 92.135 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.343 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.132 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds