Wall clock time and date at job start Tue Mar 31 2020 10:48:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.30997 * 1 3 3 C 1.50706 * 119.99906 * 2 1 4 4 N 1.46899 * 109.47019 * 124.14275 * 3 2 1 5 5 C 1.46902 * 110.99874 * 300.57512 * 4 3 2 6 6 C 1.52995 * 109.47394 * 287.99138 * 5 4 3 7 7 C 1.47204 * 109.47258 * 179.27395 * 6 5 4 8 8 N 5.53662 * 77.89816 * 65.45651 * 2 1 3 9 9 C 1.46891 * 111.00281 * 64.53174 * 4 3 2 10 10 C 1.50703 * 109.47122 * 66.04852 * 9 4 3 11 11 C 1.38292 * 119.96838 * 269.97663 * 10 9 4 12 12 C 1.38243 * 120.10894 * 180.02562 * 11 10 9 13 13 C 1.38173 * 120.05628 * 359.67393 * 12 11 10 14 14 C 1.38715 * 119.94248 * 0.62614 * 13 12 11 15 15 O 1.35895 * 120.05461 * 179.67291 * 14 13 12 16 16 C 1.42900 * 117.00252 * 359.72398 * 15 14 13 17 17 C 1.53000 * 109.47160 * 179.97438 * 16 15 14 18 18 C 1.50700 * 109.47196 * 180.02562 * 17 16 15 19 19 H 1.08002 * 119.99707 * 359.97438 * 18 17 16 20 20 C 1.37877 * 119.99967 * 180.02562 * 18 17 16 21 21 N 1.31512 * 120.00075 * 359.97438 * 20 18 17 22 22 Si 1.86800 * 119.99810 * 179.97438 * 20 18 17 23 23 H 1.48496 * 109.47149 * 59.99544 * 22 20 18 24 24 H 1.48503 * 109.47201 * 179.97438 * 22 20 18 25 25 H 1.48504 * 109.46951 * 300.00104 * 22 20 18 26 26 C 1.38124 * 119.97359 * 90.00014 * 10 9 4 27 27 H 1.07999 * 119.99882 * 180.02562 * 1 2 3 28 28 H 1.08002 * 119.99881 * 359.97438 * 1 2 3 29 29 H 1.07994 * 120.00132 * 179.97438 * 2 1 3 30 30 H 1.08997 * 109.46990 * 4.13793 * 3 2 1 31 31 H 1.09001 * 109.46567 * 244.14103 * 3 2 1 32 32 H 1.09004 * 109.46602 * 47.99208 * 5 4 3 33 33 H 1.08999 * 109.47049 * 167.98789 * 5 4 3 34 34 H 1.09005 * 109.47104 * 299.26937 * 6 5 4 35 35 H 1.09005 * 109.47219 * 59.27449 * 6 5 4 36 36 H 1.09000 * 109.47508 * 306.04491 * 9 4 3 37 37 H 1.08999 * 109.47337 * 186.04810 * 9 4 3 38 38 H 1.07990 * 119.94539 * 0.02562 * 11 10 9 39 39 H 1.07995 * 119.97347 * 179.97438 * 12 11 10 40 40 H 1.07997 * 120.03059 * 180.29437 * 13 12 11 41 41 H 1.08998 * 109.47261 * 300.00221 * 16 15 14 42 42 H 1.09000 * 109.46721 * 59.99807 * 16 15 14 43 43 H 1.08998 * 109.47320 * 300.00314 * 17 16 15 44 44 H 1.09000 * 109.47003 * 59.99912 * 17 16 15 45 45 H 0.96998 * 119.99431 * 180.02562 * 21 20 18 46 46 H 1.08001 * 120.02967 * 0.02562 * 26 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0635 1.3052 0.0000 4 7 2.9815 1.3406 1.1463 5 6 2.2483 1.2070 2.4122 6 6 1.4754 2.4972 2.6926 7 6 0.7269 2.3570 3.9523 8 7 0.1492 2.2487 4.9244 9 6 4.0155 0.3043 1.0249 10 6 4.9017 0.6146 -0.1538 11 6 4.5855 0.1186 -1.4054 12 6 5.3967 0.4010 -2.4886 13 6 6.5223 1.1854 -2.3243 14 6 6.8450 1.6790 -1.0688 15 8 7.9551 2.4452 -0.9034 16 6 8.7479 2.6980 -2.0651 17 6 9.9452 3.5716 -1.6853 18 6 10.7810 3.8387 -2.9105 19 1 10.4877 3.4263 -3.8646 20 6 11.9205 4.6088 -2.8132 21 7 12.2779 5.1105 -1.6513 22 14 12.9568 4.9393 -4.3319 23 1 12.1344 5.6423 -5.3489 24 1 14.1189 5.7873 -3.9632 25 1 13.4407 3.6513 -4.8908 26 6 6.0294 1.3937 0.0169 27 1 -0.5400 -0.9353 0.0004 28 1 -0.5400 0.9353 0.0004 29 1 1.8500 -0.9352 0.0004 30 1 1.3575 2.1323 0.0742 31 1 2.6333 1.3956 -0.9248 32 1 1.5498 0.3731 2.3412 33 1 2.9534 1.0224 3.2227 34 1 2.1750 3.3290 2.7764 35 1 0.7794 2.6887 1.8758 36 1 3.5417 -0.6663 0.8777 37 1 4.6155 0.2814 1.9345 38 1 3.7034 -0.4904 -1.5368 39 1 5.1479 0.0122 -3.4649 40 1 7.1531 1.4097 -3.1717 41 1 9.1030 1.7527 -2.4755 42 1 8.1443 3.2142 -2.8116 43 1 9.5898 4.5168 -1.2752 44 1 10.5489 3.0558 -0.9386 45 1 13.0794 5.6526 -1.5831 46 1 6.2764 1.7802 0.9947 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000430086268.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:48:39 Heat of formation + Delta-G solvation = 29.369534 kcal Electronic energy + Delta-G solvation = -24585.035000 eV Core-core repulsion = 21054.418979 eV Total energy + Delta-G solvation = -3530.616021 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 314.174 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -40.08540 -38.96957 -37.24374 -36.65060 -33.71111 -33.39830 -32.60722 -30.91853 -30.25623 -29.12797 -27.13619 -25.57173 -24.85085 -22.57553 -22.07394 -21.76815 -20.44033 -19.58801 -18.00334 -17.51328 -16.50112 -16.38550 -16.10843 -15.67880 -15.52477 -15.33919 -15.06189 -14.66999 -14.59277 -14.42023 -13.94653 -13.66104 -13.16975 -13.00269 -12.94190 -12.65339 -12.57748 -12.32769 -12.17955 -12.02000 -11.87674 -11.75256 -11.42141 -11.33683 -11.25692 -11.17197 -10.86473 -10.74245 -10.45243 -9.89238 -9.80099 -9.66647 -9.31953 -8.83372 -8.62137 -8.45191 -7.84575 -6.10802 -4.15571 1.40083 1.65143 1.82732 2.37937 2.45310 3.28102 3.32587 3.33693 3.34522 3.81280 3.86885 4.14077 4.39784 4.43120 4.53882 4.64053 4.65789 4.75113 4.92953 5.01559 5.08701 5.13485 5.25498 5.25800 5.32760 5.37627 5.44631 5.47915 5.53675 5.64498 5.67874 5.83001 6.02735 6.05053 6.14230 6.17195 6.23246 6.52489 6.56196 6.56879 6.63170 6.72439 6.75100 6.96633 7.21506 7.50032 7.63618 7.80692 8.05983 8.23219 8.89801 9.48688 11.00674 Molecular weight = 314.17amu Principal moments of inertia in cm(-1) A = 0.019920 B = 0.002172 C = 0.002016 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1405.277604 B =12889.570924 C =13886.848289 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C -0.192 4.192 3 C 0.068 3.932 4 N -0.521 5.521 5 C 0.055 3.945 6 C -0.024 4.024 7 C 0.210 3.790 8 N -0.440 5.440 9 C 0.095 3.905 10 C -0.046 4.046 11 C -0.166 4.166 12 C -0.081 4.081 13 C -0.211 4.211 14 C 0.145 3.855 15 O -0.315 6.315 16 C 0.066 3.934 17 C 0.025 3.975 18 C -0.527 4.527 19 H 0.057 0.943 20 C 0.061 3.939 21 N -0.889 5.889 22 Si 0.899 3.101 23 H -0.275 1.275 24 H -0.286 1.286 25 H -0.276 1.276 26 C -0.138 4.138 27 H 0.094 0.906 28 H 0.097 0.903 29 H 0.109 0.891 30 H 0.082 0.918 31 H 0.097 0.903 32 H 0.050 0.950 33 H 0.084 0.916 34 H 0.120 0.880 35 H 0.107 0.893 36 H 0.049 0.951 37 H 0.086 0.914 38 H 0.114 0.886 39 H 0.119 0.881 40 H 0.129 0.871 41 H 0.050 0.950 42 H 0.050 0.950 43 H 0.028 0.972 44 H 0.027 0.973 45 H 0.264 0.736 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.796 -10.778 3.141 25.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.218 4.218 2 C -0.211 4.211 3 C -0.059 4.059 4 N -0.243 5.243 5 C -0.074 4.074 6 C -0.064 4.064 7 C -0.108 4.108 8 N -0.117 5.117 9 C -0.031 4.031 10 C -0.047 4.047 11 C -0.185 4.185 12 C -0.099 4.099 13 C -0.230 4.230 14 C 0.098 3.902 15 O -0.228 6.228 16 C -0.008 4.008 17 C -0.012 4.012 18 C -0.566 4.566 19 H 0.076 0.924 20 C -0.142 4.142 21 N -0.527 5.527 22 Si 0.726 3.274 23 H -0.201 1.201 24 H -0.211 1.211 25 H -0.201 1.201 26 C -0.158 4.158 27 H 0.113 0.887 28 H 0.116 0.884 29 H 0.127 0.873 30 H 0.101 0.899 31 H 0.115 0.885 32 H 0.068 0.932 33 H 0.102 0.898 34 H 0.138 0.862 35 H 0.125 0.875 36 H 0.067 0.933 37 H 0.105 0.895 38 H 0.132 0.868 39 H 0.137 0.863 40 H 0.147 0.853 41 H 0.068 0.932 42 H 0.069 0.931 43 H 0.046 0.954 44 H 0.046 0.954 45 H 0.074 0.926 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -23.170 -10.248 4.884 25.802 hybrid contribution 0.455 -0.618 -1.574 1.751 sum -22.715 -10.867 3.311 25.397 Atomic orbital electron populations 1.23887 0.95916 1.01906 1.00114 1.23661 0.96673 1.00244 1.00550 1.21599 0.94776 0.94098 0.95427 1.62172 1.12868 1.48020 1.01250 1.22012 0.97214 0.95335 0.92822 1.19253 0.98091 1.01204 0.87888 1.29175 0.93641 0.93326 0.94705 1.81250 1.10138 1.08410 1.11914 1.21043 0.92137 0.92717 0.97232 1.19276 0.94428 0.96946 0.94056 1.20781 1.00950 1.04238 0.92539 1.20841 0.93903 0.96706 0.98458 1.21396 1.00677 1.03748 0.97153 1.19205 0.87351 0.90296 0.93330 1.86177 1.33766 1.64399 1.38489 1.23322 0.92626 0.99677 0.85214 1.19118 0.89688 0.94502 0.97858 1.20930 1.08684 1.32675 0.94262 0.92437 1.24989 0.97452 0.95505 0.96246 1.69963 1.25093 1.33954 1.23700 0.86549 0.79674 0.78340 0.82808 1.20094 1.21120 1.20110 1.20254 0.95193 1.02118 0.98206 0.88728 0.88438 0.87335 0.89940 0.88489 0.93190 0.89755 0.86175 0.87497 0.93273 0.89523 0.86758 0.86326 0.85347 0.93186 0.93142 0.95372 0.95415 0.92640 0.85333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.94 14.32 29.02 0.42 -0.53 16 2 C -0.19 -1.10 7.35 -36.02 -0.26 -1.37 16 3 C 0.07 0.43 5.31 -4.97 -0.03 0.41 16 4 N -0.52 -3.60 4.66 -237.52 -1.11 -4.70 16 5 C 0.06 0.30 4.78 -3.83 -0.02 0.28 16 6 C -0.02 -0.11 5.76 -29.52 -0.17 -0.28 16 7 C 0.21 1.61 15.43 -20.76 -0.32 1.29 16 8 N -0.44 -4.88 18.54 42.15 0.78 -4.10 16 9 C 0.10 0.75 4.96 -4.98 -0.02 0.73 16 10 C -0.05 -0.50 4.89 -104.64 -0.51 -1.01 16 11 C -0.17 -1.73 7.89 -39.56 -0.31 -2.05 16 12 C -0.08 -0.96 10.04 -39.60 -0.40 -1.35 16 13 C -0.21 -3.09 9.04 -39.43 -0.36 -3.44 16 14 C 0.15 2.38 6.69 -39.21 -0.26 2.12 16 15 O -0.32 -6.28 10.14 -19.41 -0.20 -6.48 16 16 C 0.07 1.37 4.68 37.16 0.17 1.55 16 17 C 0.03 0.66 5.34 -27.88 -0.15 0.51 16 18 C -0.53 -14.52 9.11 -34.44 -0.31 -14.83 16 19 H 0.06 1.50 7.74 -52.49 -0.41 1.10 16 20 C 0.06 1.70 5.46 -17.82 -0.10 1.60 16 21 N -0.89 -26.22 13.29 55.43 0.74 -25.48 16 22 Si 0.90 21.05 29.54 -169.99 -5.02 16.03 16 23 H -0.28 -6.31 7.11 56.52 0.40 -5.91 16 24 H -0.29 -6.63 7.11 56.52 0.40 -6.23 16 25 H -0.28 -6.32 7.11 56.52 0.40 -5.92 16 26 C -0.14 -1.90 9.64 -39.43 -0.38 -2.28 16 27 H 0.09 0.46 8.06 -52.49 -0.42 0.04 16 28 H 0.10 0.44 7.84 -52.49 -0.41 0.03 16 29 H 0.11 0.64 6.81 -52.49 -0.36 0.29 16 30 H 0.08 0.43 6.36 -51.93 -0.33 0.10 16 31 H 0.10 0.77 5.85 -51.93 -0.30 0.46 16 32 H 0.05 0.27 6.69 -51.93 -0.35 -0.07 16 33 H 0.08 0.45 7.81 -51.93 -0.41 0.04 16 34 H 0.12 0.47 8.14 -51.93 -0.42 0.05 16 35 H 0.11 0.34 6.75 -51.93 -0.35 -0.01 16 36 H 0.05 0.34 6.30 -51.93 -0.33 0.01 16 37 H 0.09 0.65 7.80 -51.93 -0.41 0.24 16 38 H 0.11 0.95 7.91 -52.49 -0.42 0.53 16 39 H 0.12 1.14 8.06 -52.49 -0.42 0.71 16 40 H 0.13 1.88 6.30 -52.49 -0.33 1.55 16 41 H 0.05 1.00 7.67 -51.93 -0.40 0.60 16 42 H 0.05 1.00 7.65 -51.93 -0.40 0.61 16 43 H 0.03 0.77 8.14 -51.93 -0.42 0.35 16 44 H 0.03 0.76 8.14 -51.93 -0.42 0.34 16 45 H 0.26 7.32 8.31 -40.82 -0.34 6.98 16 46 H 0.13 1.70 8.06 -52.49 -0.42 1.28 16 LS Contribution 384.56 15.07 5.80 5.80 Total: -1.00 -31.56 384.56 -8.88 -40.44 By element: Atomic # 1 Polarization: 4.02 SS G_CDS: -6.86 Total: -2.84 kcal Atomic # 6 Polarization: -15.65 SS G_CDS: -3.02 Total: -18.66 kcal Atomic # 7 Polarization: -34.70 SS G_CDS: 0.41 Total: -34.28 kcal Atomic # 8 Polarization: -6.28 SS G_CDS: -0.20 Total: -6.48 kcal Atomic # 14 Polarization: 21.05 SS G_CDS: -5.02 Total: 16.03 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -31.56 -8.88 -40.44 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000430086268.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 69.810 kcal (2) G-P(sol) polarization free energy of solvation -31.556 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 38.254 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.440 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.370 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds