Wall clock time and date at job start Tue Mar 31 2020 10:25:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.42901 * 109.47084 * 2 1 4 4 C 1.42895 * 113.99948 * 179.97438 * 3 2 1 5 5 C 1.53006 * 109.47036 * 179.97438 * 4 3 2 6 6 C 1.52997 * 109.47164 * 300.00260 * 5 4 3 7 7 C 1.52999 * 109.46623 * 60.00161 * 5 4 3 8 8 C 1.52997 * 109.47127 * 180.02562 * 5 4 3 9 9 N 1.46496 * 109.46953 * 179.97438 * 8 5 4 10 10 C 1.34779 * 120.00107 * 180.02562 * 9 8 5 11 11 O 1.21588 * 119.99436 * 359.97438 * 10 9 8 12 12 N 1.34774 * 120.00239 * 180.02562 * 10 9 8 13 13 C 1.47018 * 125.64982 * 359.69668 * 12 10 9 14 14 C 1.54330 * 107.27040 * 178.84705 * 13 12 10 15 15 C 1.55159 * 103.01733 * 338.13958 * 14 13 12 16 16 O 1.42905 * 111.00358 * 277.22992 * 15 14 13 17 17 C 1.50705 * 111.03793 * 153.39381 * 15 14 13 18 18 H 1.08001 * 120.00023 * 6.33090 * 17 15 14 19 19 C 1.37874 * 119.99861 * 186.32931 * 17 15 14 20 20 N 1.31506 * 120.00306 * 0.02562 * 19 17 15 21 21 Si 1.86801 * 119.99700 * 180.02562 * 19 17 15 22 22 H 1.48503 * 109.47426 * 359.97438 * 21 19 17 23 23 H 1.48494 * 109.47209 * 120.00159 * 21 19 17 24 24 H 1.48506 * 109.46946 * 240.00100 * 21 19 17 25 25 C 1.47429 * 125.64795 * 179.97438 * 12 10 9 26 26 H 1.09000 * 109.46805 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.47760 * 299.99812 * 1 2 3 28 28 H 1.08999 * 109.47329 * 60.00419 * 1 2 3 29 29 H 1.08995 * 109.46983 * 239.99778 * 2 1 3 30 30 H 1.09003 * 109.47124 * 120.00051 * 2 1 3 31 31 H 1.09001 * 109.46798 * 60.00190 * 4 3 2 32 32 H 1.08993 * 109.47318 * 299.99656 * 4 3 2 33 33 H 1.09000 * 109.47140 * 60.00051 * 6 5 4 34 34 H 1.09001 * 109.47230 * 179.97438 * 6 5 4 35 35 H 1.09001 * 109.47375 * 300.00034 * 6 5 4 36 36 H 1.09001 * 109.47362 * 60.00551 * 7 5 4 37 37 H 1.09002 * 109.46716 * 179.97438 * 7 5 4 38 38 H 1.09000 * 109.47486 * 299.99829 * 7 5 4 39 39 H 1.08996 * 109.46952 * 300.00302 * 8 5 4 40 40 H 1.09001 * 109.46832 * 60.00321 * 8 5 4 41 41 H 0.96999 * 120.00356 * 0.02562 * 9 8 5 42 42 H 1.09004 * 109.87718 * 298.39481 * 13 12 10 43 43 H 1.09006 * 109.88211 * 59.55394 * 13 12 10 44 44 H 1.08995 * 110.85586 * 219.67198 * 14 13 12 45 45 H 1.09002 * 110.51386 * 96.44614 * 14 13 12 46 46 H 0.96701 * 113.99749 * 173.64840 * 16 15 14 47 47 H 0.97006 * 120.00456 * 179.97438 * 20 19 17 48 48 H 1.08997 * 110.36766 * 322.93543 * 25 12 10 49 49 H 1.08999 * 110.36232 * 85.14882 * 25 12 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.4308 1.4601 0.0006 5 6 3.8253 2.9384 -0.0001 6 6 3.2605 3.6164 -1.2500 7 6 3.2594 3.6178 1.2485 8 6 5.3505 3.0593 -0.0001 9 7 5.7282 4.4747 -0.0014 10 6 7.0297 4.8249 -0.0022 11 8 7.8903 3.9660 -0.0013 12 7 7.3772 6.1271 -0.0029 13 6 6.4439 7.2630 -0.0092 14 6 7.2913 8.5525 0.0222 15 6 8.6441 8.0675 0.6072 16 8 8.5933 8.0085 2.0341 17 6 9.7788 8.9454 0.1457 18 1 9.5725 9.8404 -0.4224 19 6 11.0802 8.6060 0.4490 20 7 11.3315 7.5159 1.1404 21 14 12.4867 9.6945 -0.1223 22 1 11.9420 10.8517 -0.8771 23 1 13.2441 10.1845 1.0572 24 1 13.3921 8.9124 -1.0020 25 6 8.7562 6.6484 -0.0032 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 1.8933 -0.5138 -0.8899 30 1 1.8933 -0.5139 0.8900 31 1 3.8339 0.9764 -0.8892 32 1 3.8332 0.9768 0.8908 33 1 2.1739 3.5304 -1.2504 34 1 3.5412 4.6697 -1.2502 35 1 3.6636 3.1324 -2.1395 36 1 3.6618 3.1348 2.1390 37 1 3.5408 4.6708 1.2483 38 1 2.1728 3.5317 1.2481 39 1 5.7532 2.5761 0.8900 40 1 5.7533 2.5753 -0.8899 41 1 5.0416 5.1599 -0.0017 42 1 5.8361 7.2383 -0.9137 43 1 5.8031 7.2212 0.8717 44 1 6.8362 9.3002 0.6716 45 1 7.4257 8.9458 -0.9855 46 1 9.3803 7.6197 2.4398 47 1 12.2471 7.2769 1.3535 48 1 9.3994 6.0201 0.6130 49 1 9.1415 6.7012 -1.0215 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000592024770.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:25:47 Heat of formation + Delta-G solvation = -137.210565 kcal Electronic energy + Delta-G solvation = -27381.485250 eV Core-core repulsion = 23536.336854 eV Total energy + Delta-G solvation = -3845.148396 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 314.204 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -39.87519 -38.87902 -37.49008 -36.40340 -34.18765 -32.99754 -32.20441 -31.25514 -29.98846 -27.81078 -27.39071 -26.97221 -25.85279 -24.43907 -23.05701 -22.42867 -19.66387 -19.54701 -19.18523 -17.57167 -17.03018 -16.87865 -16.40807 -15.63836 -15.42051 -15.12203 -14.78803 -14.61128 -14.39967 -14.12754 -13.77455 -13.41712 -13.25557 -13.05020 -12.97967 -12.76756 -12.72446 -12.30966 -12.02378 -11.87035 -11.65317 -11.64134 -11.63250 -11.39118 -11.04474 -10.99047 -10.94319 -10.79125 -10.72532 -10.56953 -10.44365 -10.16229 -9.85246 -9.58480 -9.33784 -8.77117 -8.67575 -8.32239 -7.64534 -6.25035 -4.34779 3.02364 3.21649 3.30325 3.33590 3.52876 3.79991 4.27989 4.49815 4.55851 4.61711 4.67887 4.71379 4.89434 5.02098 5.03071 5.11286 5.27817 5.28404 5.35428 5.43549 5.55316 5.58772 5.63360 5.66669 5.73015 5.76193 5.78168 5.84759 5.88261 5.93104 6.03998 6.14044 6.18927 6.20398 6.53813 6.73263 6.79204 6.91796 6.94037 7.01057 7.26870 7.36108 7.69046 7.77163 8.06441 8.57980 8.70155 9.18324 9.32856 9.41000 10.81956 Molecular weight = 314.20amu Principal moments of inertia in cm(-1) A = 0.037461 B = 0.002455 C = 0.002400 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 747.255074 B =11403.913187 C =11663.678182 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C 0.057 3.943 3 O -0.383 6.383 4 C 0.076 3.924 5 C -0.074 4.074 6 C -0.137 4.137 7 C -0.137 4.137 8 C 0.152 3.848 9 N -0.747 5.747 10 C 0.716 3.284 11 O -0.598 6.598 12 N -0.628 5.628 13 C 0.105 3.895 14 C -0.116 4.116 15 C 0.248 3.752 16 O -0.583 6.583 17 C -0.537 4.537 18 H 0.067 0.933 19 C 0.070 3.930 20 N -0.891 5.891 21 Si 0.903 3.097 22 H -0.272 1.272 23 H -0.282 1.282 24 H -0.282 1.282 25 C 0.114 3.886 26 H 0.069 0.931 27 H 0.062 0.938 28 H 0.062 0.938 29 H 0.047 0.953 30 H 0.047 0.953 31 H 0.052 0.948 32 H 0.052 0.948 33 H 0.065 0.935 34 H 0.055 0.945 35 H 0.055 0.945 36 H 0.055 0.945 37 H 0.055 0.945 38 H 0.065 0.935 39 H 0.064 0.936 40 H 0.064 0.936 41 H 0.393 0.607 42 H 0.050 0.950 43 H 0.054 0.946 44 H 0.073 0.927 45 H 0.077 0.923 46 H 0.381 0.619 47 H 0.269 0.731 48 H 0.085 0.915 49 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.023 -10.809 -2.665 22.041 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.020 4.020 3 O -0.302 6.302 4 C -0.001 4.001 5 C -0.074 4.074 6 C -0.194 4.194 7 C -0.195 4.195 8 C 0.027 3.973 9 N -0.405 5.405 10 C 0.418 3.582 11 O -0.477 6.477 12 N -0.365 5.365 13 C -0.018 4.018 14 C -0.154 4.154 15 C 0.207 3.793 16 O -0.391 6.391 17 C -0.575 4.575 18 H 0.085 0.915 19 C -0.133 4.133 20 N -0.530 5.530 21 Si 0.731 3.269 22 H -0.196 1.196 23 H -0.208 1.208 24 H -0.208 1.208 25 C -0.008 4.008 26 H 0.088 0.912 27 H 0.081 0.919 28 H 0.081 0.919 29 H 0.065 0.935 30 H 0.065 0.935 31 H 0.070 0.930 32 H 0.071 0.929 33 H 0.084 0.916 34 H 0.074 0.926 35 H 0.074 0.926 36 H 0.075 0.925 37 H 0.074 0.926 38 H 0.084 0.916 39 H 0.083 0.917 40 H 0.082 0.918 41 H 0.228 0.772 42 H 0.068 0.932 43 H 0.073 0.927 44 H 0.092 0.908 45 H 0.095 0.905 46 H 0.231 0.769 47 H 0.079 0.921 48 H 0.103 0.897 49 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -18.949 -11.196 -2.694 22.174 hybrid contribution 1.237 0.252 -0.229 1.283 sum -17.713 -10.944 -2.922 21.025 Atomic orbital electron populations 1.21733 0.93806 1.02138 1.03112 1.22441 0.95507 0.83996 1.00045 1.87856 1.20887 1.26058 1.95418 1.22381 0.81367 0.95818 1.00527 1.20788 0.94490 0.94504 0.97640 1.21791 1.01496 1.00108 0.96019 1.21795 1.01458 1.00175 0.96040 1.20981 0.91966 0.82173 1.02169 1.45070 1.06071 1.07603 1.81799 1.15500 0.82368 0.82137 0.78190 1.90882 1.49115 1.48659 1.59053 1.47922 1.10060 1.02525 1.76017 1.21922 0.92859 0.87828 0.99219 1.22586 0.96601 0.94975 1.01196 1.19641 0.90863 0.89541 0.79247 1.86101 1.46193 1.85836 1.20999 1.21491 0.90563 1.09557 1.35913 0.91501 1.25086 0.99205 0.94941 0.94067 1.69731 1.21109 1.23706 1.38440 0.86359 0.81632 0.80417 0.78538 1.19604 1.20787 1.20805 1.23112 0.79182 0.97477 1.00986 0.91238 0.91863 0.91891 0.93500 0.93475 0.92979 0.92927 0.91583 0.92604 0.92614 0.92548 0.92555 0.91582 0.91737 0.91795 0.77194 0.93212 0.92746 0.90795 0.90452 0.76933 0.92074 0.89683 0.92551 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.91 10.28 37.16 0.38 -0.53 16 2 C 0.06 0.41 6.66 37.16 0.25 0.66 16 3 O -0.38 -3.65 8.99 -35.23 -0.32 -3.97 16 4 C 0.08 0.70 4.81 37.16 0.18 0.88 16 5 C -0.07 -0.74 0.61 -154.51 -0.09 -0.84 16 6 C -0.14 -1.32 8.15 37.16 0.30 -1.02 16 7 C -0.14 -1.37 8.16 37.16 0.30 -1.07 16 8 C 0.15 1.98 4.56 -4.05 -0.02 1.97 16 9 N -0.75 -11.42 4.92 -65.23 -0.32 -11.74 16 10 C 0.72 14.80 8.49 -86.92 -0.74 14.06 16 11 O -0.60 -14.73 16.60 5.29 0.09 -14.64 16 12 N -0.63 -13.19 3.33 -176.24 -0.59 -13.78 16 13 C 0.11 1.84 6.15 -3.06 -0.02 1.83 16 14 C -0.12 -2.28 6.13 -24.89 -0.15 -2.44 16 15 C 0.25 6.00 0.87 -89.63 -0.08 5.92 16 16 O -0.58 -14.90 13.16 -35.23 -0.46 -15.36 16 17 C -0.54 -13.98 8.27 -34.44 -0.28 -14.27 16 18 H 0.07 1.71 7.79 -52.49 -0.41 1.30 16 19 C 0.07 1.84 5.29 -17.82 -0.09 1.75 16 20 N -0.89 -23.98 10.69 55.43 0.59 -23.38 16 21 Si 0.90 20.44 29.54 -169.99 -5.02 15.42 16 22 H -0.27 -6.06 7.11 56.52 0.40 -5.65 16 23 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 24 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 25 C 0.11 2.79 5.38 -2.54 -0.01 2.78 16 26 H 0.07 0.31 8.14 -51.93 -0.42 -0.11 16 27 H 0.06 0.40 8.14 -51.93 -0.42 -0.02 16 28 H 0.06 0.40 8.14 -51.93 -0.42 -0.03 16 29 H 0.05 0.31 8.14 -51.93 -0.42 -0.11 16 30 H 0.05 0.31 8.14 -51.93 -0.42 -0.11 16 31 H 0.05 0.45 8.14 -51.93 -0.42 0.03 16 32 H 0.05 0.46 8.14 -51.93 -0.42 0.04 16 33 H 0.07 0.63 7.68 -51.93 -0.40 0.23 16 34 H 0.05 0.54 6.86 -51.93 -0.36 0.18 16 35 H 0.05 0.54 8.14 -51.93 -0.42 0.12 16 36 H 0.06 0.58 8.14 -51.93 -0.42 0.15 16 37 H 0.06 0.57 6.86 -51.93 -0.36 0.21 16 38 H 0.07 0.64 7.68 -51.93 -0.40 0.24 16 39 H 0.06 0.90 8.14 -51.93 -0.42 0.47 16 40 H 0.06 0.87 8.14 -51.93 -0.42 0.44 16 41 H 0.39 5.17 5.15 -40.82 -0.21 4.96 16 42 H 0.05 0.73 8.14 -51.93 -0.42 0.31 16 43 H 0.05 0.89 8.14 -51.93 -0.42 0.47 16 44 H 0.07 1.39 8.14 -51.93 -0.42 0.97 16 45 H 0.08 1.44 8.03 -51.93 -0.42 1.02 16 46 H 0.38 10.03 7.56 45.56 0.34 10.38 16 47 H 0.27 6.95 8.31 -40.82 -0.34 6.61 16 48 H 0.08 2.35 7.33 -51.93 -0.38 1.97 16 49 H 0.06 1.43 8.03 -51.93 -0.42 1.01 16 LS Contribution 387.64 15.07 5.84 5.84 Total: -1.00 -30.52 387.64 -8.32 -38.84 By element: Atomic # 1 Polarization: 21.14 SS G_CDS: -8.05 Total: 13.09 kcal Atomic # 6 Polarization: 9.76 SS G_CDS: -0.08 Total: 9.68 kcal Atomic # 7 Polarization: -48.59 SS G_CDS: -0.31 Total: -48.90 kcal Atomic # 8 Polarization: -33.27 SS G_CDS: -0.69 Total: -33.97 kcal Atomic # 14 Polarization: 20.44 SS G_CDS: -5.02 Total: 15.42 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -30.52 -8.32 -38.84 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000592024770.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.373 kcal (2) G-P(sol) polarization free energy of solvation -30.518 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.892 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.319 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.837 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.211 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds