Wall clock time and date at job start Tue Mar 31 2020 10:42:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 H 1.09000 * 109.47883 * 2 1 4 4 C 1.50704 * 109.47218 * 120.00317 * 2 1 3 5 5 H 1.07999 * 120.00463 * 119.99276 * 4 2 1 6 6 C 1.37879 * 119.99717 * 299.99667 * 4 2 1 7 7 N 1.31518 * 120.00060 * 359.97438 * 6 4 2 8 8 Si 1.86797 * 120.00038 * 180.02562 * 6 4 2 9 9 H 1.48491 * 109.47364 * 359.97438 * 8 6 4 10 10 H 1.48496 * 109.47309 * 120.00017 * 8 6 4 11 11 H 1.48504 * 109.46796 * 239.99779 * 8 6 4 12 12 N 1.46505 * 109.46959 * 239.99796 * 2 1 3 13 13 C 1.34773 * 120.00095 * 85.00501 * 12 2 1 14 14 O 1.21583 * 119.99900 * 359.97438 * 13 12 2 15 15 C 1.47637 * 120.00162 * 179.72282 * 13 12 2 16 16 C 1.39889 * 120.17028 * 89.99786 * 15 13 12 17 17 F 1.35100 * 120.10716 * 359.97438 * 16 15 13 18 18 C 1.38254 * 119.78507 * 179.71816 * 16 15 13 19 19 C 1.38278 * 120.14360 * 0.53938 * 18 16 15 20 20 C 1.38357 * 120.35997 * 359.75738 * 19 18 16 21 21 C 1.38033 * 120.20678 * 359.96306 * 20 19 18 22 22 Br 1.89106 * 120.07483 * 179.97438 * 21 20 19 23 23 H 1.08994 * 109.47461 * 180.02562 * 1 2 3 24 24 H 1.09003 * 109.46891 * 300.00245 * 1 2 3 25 25 H 1.09004 * 109.46940 * 59.99560 * 1 2 3 26 26 H 0.97000 * 120.00268 * 179.97438 * 7 6 4 27 27 H 0.97000 * 119.99792 * 265.00066 * 12 2 1 28 28 H 1.07997 * 119.92611 * 180.27583 * 18 16 15 29 29 H 1.08008 * 119.81691 * 179.73710 * 19 18 16 30 30 H 1.07997 * 119.89695 * 179.97438 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0323 -0.7105 1.2304 5 1 2.6531 -1.5886 1.1314 6 6 1.6992 -0.2394 2.4827 7 7 0.9436 0.8302 2.6034 8 14 2.3225 -1.1196 4.0079 9 1 3.1473 -2.2863 3.6038 10 1 3.1472 -0.1858 4.8160 11 1 1.1677 -1.5865 4.8165 12 7 2.0182 -0.6907 -1.1962 13 6 2.1470 -0.0184 -2.3571 14 8 1.8575 1.1612 -2.4119 15 6 2.6449 -0.7129 -3.5611 16 6 1.7481 -1.3405 -4.4321 17 9 0.4221 -1.3139 -4.1744 18 6 2.2225 -1.9835 -5.5603 19 6 3.5799 -2.0163 -5.8217 20 6 4.4728 -1.4028 -4.9610 21 6 4.0147 -0.7517 -3.8334 22 35 5.2385 0.0848 -2.6593 23 1 -0.3634 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5139 -0.8900 26 1 0.7090 1.1614 3.4844 27 1 2.2489 -1.6319 -1.1526 28 1 1.5317 -2.4650 -6.2366 29 1 3.9452 -2.5238 -6.7024 30 1 5.5315 -1.4334 -5.1723 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000176271946.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:42:23 Heat of formation + Delta-G solvation = -56.175224 kcal Electronic energy + Delta-G solvation = -18221.718551 eV Core-core repulsion = 14977.687340 eV Total energy + Delta-G solvation = -3244.031212 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 315.001 amu Computer time = 0.28 seconds Orbital eigenvalues (eV) -48.98367 -39.70317 -38.11360 -34.80760 -32.67258 -32.29778 -31.11953 -29.44992 -28.64904 -25.25257 -24.09957 -22.68146 -21.24273 -19.64516 -18.13212 -17.26552 -16.76410 -16.03138 -15.84064 -15.27564 -15.10265 -14.39813 -14.10170 -13.87931 -13.35097 -13.09270 -12.97805 -12.42932 -12.21948 -11.76622 -11.49325 -11.10783 -10.95693 -10.87850 -10.75861 -10.31480 -10.24090 -10.22862 -9.32121 -9.06207 -8.99796 -8.88180 -8.55231 -7.96729 -6.11277 -4.20141 0.66392 0.80015 1.47477 3.12132 3.13692 3.24814 3.32532 3.35476 3.81510 4.05552 4.35985 4.49623 4.79572 4.86121 5.04890 5.21289 5.30400 5.63685 5.74772 5.77755 5.90595 6.45091 6.83531 6.97238 7.14916 7.39756 7.52975 7.68985 7.90881 8.14297 8.57715 8.74839 9.00415 9.46540 10.94912 Molecular weight = 315.00amu Principal moments of inertia in cm(-1) A = 0.017157 B = 0.005558 C = 0.004649 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1631.590933 B = 5036.271463 C = 6020.707927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.265 3.735 3 H 0.052 0.948 4 C -0.531 4.531 5 H 0.063 0.937 6 C 0.066 3.934 7 N -0.883 5.883 8 Si 0.901 3.099 9 H -0.273 1.273 10 H -0.283 1.283 11 H -0.283 1.283 12 N -0.689 5.689 13 C 0.547 3.453 14 O -0.530 6.530 15 C -0.123 4.123 16 C 0.135 3.865 17 F -0.122 7.122 18 C -0.143 4.143 19 C -0.079 4.079 20 C -0.106 4.106 21 C -0.040 4.040 22 Br -0.016 7.016 23 H 0.027 0.973 24 H 0.092 0.908 25 H 0.015 0.985 26 H 0.264 0.736 27 H 0.390 0.610 28 H 0.145 0.855 29 H 0.144 0.856 30 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.985 -7.075 -16.260 19.447 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.164 3.836 3 H 0.069 0.931 4 C -0.569 4.569 5 H 0.081 0.919 6 C -0.137 4.137 7 N -0.521 5.521 8 Si 0.729 3.271 9 H -0.197 1.197 10 H -0.209 1.209 11 H -0.209 1.209 12 N -0.336 5.336 13 C 0.328 3.672 14 O -0.408 6.408 15 C -0.130 4.130 16 C 0.114 3.886 17 F -0.100 7.100 18 C -0.163 4.163 19 C -0.098 4.098 20 C -0.126 4.126 21 C -0.121 4.121 22 Br 0.071 6.929 23 H 0.046 0.954 24 H 0.110 0.890 25 H 0.034 0.966 26 H 0.074 0.926 27 H 0.222 0.778 28 H 0.163 0.837 29 H 0.161 0.839 30 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 8.089 -5.766 -15.625 18.515 hybrid contribution -0.146 -1.091 0.609 1.258 sum 7.943 -6.857 -15.016 18.319 Atomic orbital electron populations 1.22086 0.98251 0.99282 1.01023 1.18834 0.91110 0.94084 0.79559 0.93068 1.21222 1.32351 1.13207 0.90127 0.91928 1.24875 0.94816 0.94952 0.99016 1.69914 1.35939 1.22446 1.23778 0.86395 0.78613 0.79544 0.82574 1.19709 1.20871 1.20874 1.46509 1.63648 1.13503 1.09894 1.17785 0.79390 0.86998 0.82992 1.90793 1.50643 1.14869 1.84509 1.20351 0.92580 1.01162 0.98869 1.17588 0.77735 0.98359 0.94938 1.91581 1.30278 1.94382 1.93796 1.21219 0.97158 1.01223 0.96661 1.21083 0.91800 0.97747 0.99133 1.21132 1.01082 0.97493 0.92907 1.21756 0.92171 1.01071 0.97106 1.96874 1.56372 1.78813 1.60874 0.95351 0.88976 0.96571 0.92620 0.77760 0.83677 0.83854 0.83916 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.77 9.26 37.15 0.34 -3.43 16 2 C 0.27 6.88 2.56 -69.08 -0.18 6.70 16 3 H 0.05 1.52 7.58 -51.93 -0.39 1.13 16 4 C -0.53 -14.17 8.73 -34.44 -0.30 -14.47 16 5 H 0.06 1.61 7.74 -52.49 -0.41 1.20 16 6 C 0.07 1.80 5.30 -17.82 -0.09 1.71 16 7 N -0.88 -25.03 11.32 55.43 0.63 -24.40 16 8 Si 0.90 20.78 29.54 -169.99 -5.02 15.76 16 9 H -0.27 -6.15 7.11 56.52 0.40 -5.75 16 10 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 11 H -0.28 -6.47 7.11 56.52 0.40 -6.07 16 12 N -0.69 -15.10 5.07 -55.94 -0.28 -15.38 16 13 C 0.55 11.72 5.73 -12.43 -0.07 11.65 16 14 O -0.53 -13.44 16.77 5.29 0.09 -13.35 16 15 C -0.12 -2.09 5.64 -104.89 -0.59 -2.68 16 16 C 0.13 1.99 7.29 -38.96 -0.28 1.70 16 17 F -0.12 -2.02 16.83 2.25 0.04 -1.98 16 18 C -0.14 -1.48 10.01 -39.56 -0.40 -1.88 16 19 C -0.08 -0.67 10.03 -39.52 -0.40 -1.07 16 20 C -0.11 -1.10 9.77 -39.61 -0.39 -1.48 16 21 C -0.04 -0.58 6.26 -39.10 -0.24 -0.82 16 22 Br -0.02 -0.24 32.65 -68.01 -2.22 -2.46 16 23 H 0.03 0.67 8.14 -51.93 -0.42 0.25 16 24 H 0.09 2.53 6.07 -51.93 -0.32 2.21 16 25 H 0.02 0.39 8.14 -51.93 -0.42 -0.03 16 26 H 0.26 7.07 8.31 -40.82 -0.34 6.73 16 27 H 0.39 7.62 8.52 -40.82 -0.35 7.27 16 28 H 0.15 1.08 8.06 -52.49 -0.42 0.66 16 29 H 0.14 0.69 8.06 -52.48 -0.42 0.26 16 30 H 0.14 1.10 8.06 -52.49 -0.42 0.68 16 LS Contribution 292.75 15.07 4.41 4.41 Total: -1.00 -31.39 292.75 -7.67 -39.06 By element: Atomic # 1 Polarization: 5.12 SS G_CDS: -2.71 Total: 2.41 kcal Atomic # 6 Polarization: -1.47 SS G_CDS: -2.60 Total: -4.07 kcal Atomic # 7 Polarization: -40.13 SS G_CDS: 0.34 Total: -39.78 kcal Atomic # 8 Polarization: -13.44 SS G_CDS: 0.09 Total: -13.35 kcal Atomic # 9 Polarization: -2.02 SS G_CDS: 0.04 Total: -1.98 kcal Atomic # 14 Polarization: 20.78 SS G_CDS: -5.02 Total: 15.76 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -2.22 Total: -2.46 kcal Total LS contribution 4.41 Total: 4.41 kcal Total: -31.39 -7.67 -39.06 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000176271946.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.117 kcal (2) G-P(sol) polarization free energy of solvation -31.389 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.506 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.669 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.058 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds