Wall clock time and date at job start Tue Mar 31 2020 10:42:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09003 * 109.47018 * 2 1 4 4 C 1.50697 * 109.47124 * 240.00004 * 2 1 3 5 5 H 1.08002 * 119.99822 * 239.99854 * 4 2 1 6 6 C 1.37875 * 120.00031 * 60.00279 * 4 2 1 7 7 N 1.31511 * 119.99809 * 359.97438 * 6 4 2 8 8 Si 1.86798 * 119.99885 * 179.97438 * 6 4 2 9 9 H 1.48495 * 109.47215 * 89.99799 * 8 6 4 10 10 H 1.48508 * 109.47067 * 209.99624 * 8 6 4 11 11 H 1.48497 * 109.47271 * 329.99727 * 8 6 4 12 12 N 1.46498 * 109.47168 * 119.99731 * 2 1 3 13 13 C 1.34779 * 120.00451 * 275.00159 * 12 2 1 14 14 O 1.21574 * 119.99509 * 0.02562 * 13 12 2 15 15 C 1.47690 * 120.00174 * 179.97438 * 13 12 2 16 16 C 1.39667 * 120.16373 * 359.97438 * 15 13 12 17 17 C 1.37853 * 119.89787 * 179.71849 * 16 15 13 18 18 C 1.38450 * 120.22803 * 0.28967 * 17 16 15 19 19 C 1.38279 * 120.33157 * 0.02562 * 18 17 16 20 20 Br 1.89094 * 119.95567 * 180.02562 * 19 18 17 21 21 C 1.38408 * 120.09587 * 359.97438 * 19 18 17 22 22 F 1.35096 * 120.11621 * 180.02562 * 21 19 18 23 23 H 1.08997 * 109.47093 * 60.00307 * 1 2 3 24 24 H 1.09003 * 109.47018 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47595 * 299.99889 * 1 2 3 26 26 H 0.97008 * 119.99933 * 180.02562 * 7 6 4 27 27 H 0.97004 * 119.99814 * 95.00264 * 12 2 1 28 28 H 1.08002 * 120.05326 * 0.02562 * 16 15 13 29 29 H 1.08005 * 119.89004 * 180.30175 * 17 16 15 30 30 H 1.08001 * 119.83927 * 179.97438 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 6 2.0323 -0.7104 -1.2304 5 1 2.6532 -1.5885 -1.1313 6 6 1.6993 -0.2393 -2.4827 7 7 0.9428 0.8297 -2.6033 8 14 2.3225 -1.1195 -4.0078 9 1 1.3449 -2.1615 -4.4123 10 1 2.4873 -0.1401 -5.1120 11 1 3.6309 -1.7565 -3.7119 12 7 2.0183 -0.6905 1.1962 13 6 2.1470 -0.0182 2.3572 14 8 1.8574 1.1613 2.4118 15 6 2.6388 -0.7146 3.5632 16 6 2.9710 -2.0699 3.5046 17 6 3.4350 -2.7130 4.6322 18 6 3.5673 -2.0215 5.8243 19 6 3.2350 -0.6811 5.8946 20 35 3.4205 0.2532 7.5281 21 6 2.7678 -0.0220 4.7708 22 9 2.4435 1.2877 4.8389 23 1 -0.3633 0.5138 -0.8900 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5138 0.8900 26 1 0.7082 1.1609 -3.4844 27 1 2.2491 -1.6317 1.1526 28 1 2.8692 -2.6121 2.5761 29 1 3.6964 -3.7599 4.5855 30 1 3.9310 -2.5317 6.7040 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000191996682.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:42:38 Heat of formation + Delta-G solvation = -54.056357 kcal Electronic energy + Delta-G solvation = -17960.535141 eV Core-core repulsion = 14716.595810 eV Total energy + Delta-G solvation = -3243.939331 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 315.001 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -48.85110 -39.75309 -38.13650 -34.89158 -33.00095 -32.23880 -31.05882 -29.56285 -28.61534 -25.31216 -24.25112 -22.62853 -21.25922 -19.61854 -18.27276 -17.23665 -16.66924 -15.95805 -15.77828 -15.16656 -15.07128 -14.53171 -14.18846 -14.00394 -13.21934 -13.13291 -12.80441 -12.50119 -12.31050 -11.76905 -11.57862 -11.17329 -11.12617 -10.97155 -10.78540 -10.54766 -10.37114 -10.27768 -9.26609 -9.17645 -9.08665 -8.88570 -8.60641 -8.01123 -6.16330 -4.26400 0.52957 0.76653 1.26862 2.88734 3.21765 3.28757 3.30634 3.72815 3.84049 4.00855 4.31443 4.52335 4.61527 4.80298 4.99484 5.16179 5.33622 5.63255 5.66737 5.84645 5.97407 6.40808 6.78102 6.91390 7.09209 7.34885 7.47866 7.62917 7.85310 8.09435 8.52442 8.70173 8.96830 9.40942 10.89677 Molecular weight = 315.00amu Principal moments of inertia in cm(-1) A = 0.036756 B = 0.003286 C = 0.003103 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 761.602757 B = 8519.612412 C = 9022.668773 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.264 3.736 3 H 0.051 0.949 4 C -0.536 4.536 5 H 0.062 0.938 6 C 0.067 3.933 7 N -0.882 5.882 8 Si 0.903 3.097 9 H -0.279 1.279 10 H -0.285 1.285 11 H -0.273 1.273 12 N -0.698 5.698 13 C 0.540 3.460 14 O -0.534 6.534 15 C -0.153 4.153 16 C -0.045 4.045 17 C -0.134 4.134 18 C -0.048 4.048 19 C -0.146 4.146 20 Br -0.030 7.030 21 C 0.181 3.819 22 F -0.099 7.099 23 H 0.092 0.908 24 H 0.027 0.973 25 H 0.016 0.984 26 H 0.265 0.735 27 H 0.388 0.612 28 H 0.146 0.854 29 H 0.144 0.856 30 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.693 -8.133 19.185 21.601 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.163 3.837 3 H 0.069 0.931 4 C -0.575 4.575 5 H 0.080 0.920 6 C -0.136 4.136 7 N -0.519 5.519 8 Si 0.730 3.270 9 H -0.205 1.205 10 H -0.210 1.210 11 H -0.198 1.198 12 N -0.346 5.346 13 C 0.324 3.676 14 O -0.412 6.412 15 C -0.158 4.158 16 C -0.064 4.064 17 C -0.153 4.153 18 C -0.068 4.068 19 C -0.226 4.226 20 Br 0.055 6.945 21 C 0.159 3.841 22 F -0.076 7.076 23 H 0.110 0.890 24 H 0.046 0.954 25 H 0.035 0.965 26 H 0.075 0.925 27 H 0.221 0.779 28 H 0.163 0.837 29 H 0.161 0.839 30 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 5.437 -6.725 19.632 21.453 hybrid contribution 0.305 -0.923 -1.197 1.542 sum 5.742 -7.648 18.436 20.769 Atomic orbital electron populations 1.22086 0.98203 0.99238 1.01095 1.18830 0.91195 0.94123 0.79573 0.93069 1.21179 1.32719 1.13340 0.90220 0.92010 1.24885 0.94760 0.94914 0.99079 1.69902 1.35674 1.22331 1.23997 0.86428 0.79153 0.79265 0.82135 1.20513 1.21023 1.19825 1.46473 1.64454 1.13480 1.10168 1.17878 0.79682 0.86918 0.83086 1.90818 1.50572 1.15101 1.84725 1.20511 1.05901 0.95251 0.94183 1.21494 0.93154 0.92267 0.99513 1.21158 1.01313 1.00948 0.91879 1.21142 0.95567 0.90994 0.99120 1.21875 1.11461 0.96893 0.92391 1.96742 1.96952 1.75936 1.24887 1.17398 0.95405 0.79242 0.92099 1.91651 1.88757 1.30768 1.96463 0.88971 0.95366 0.96533 0.92478 0.77855 0.83661 0.83852 0.83852 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.65 9.26 37.16 0.34 -3.31 16 2 C 0.26 6.66 2.56 -69.09 -0.18 6.48 16 3 H 0.05 1.50 7.58 -51.93 -0.39 1.10 16 4 C -0.54 -13.91 8.73 -34.44 -0.30 -14.21 16 5 H 0.06 1.51 7.74 -52.49 -0.41 1.10 16 6 C 0.07 1.78 5.30 -17.82 -0.09 1.68 16 7 N -0.88 -24.58 11.32 55.43 0.63 -23.95 16 8 Si 0.90 20.24 29.54 -169.99 -5.02 15.22 16 9 H -0.28 -6.17 7.11 56.52 0.40 -5.77 16 10 H -0.28 -6.42 7.11 56.52 0.40 -6.01 16 11 H -0.27 -6.01 7.11 56.52 0.40 -5.61 16 12 N -0.70 -14.33 5.02 -55.93 -0.28 -14.61 16 13 C 0.54 11.16 7.73 -12.40 -0.10 11.06 16 14 O -0.53 -13.30 15.00 5.30 0.08 -13.22 16 15 C -0.15 -2.45 5.88 -104.92 -0.62 -3.06 16 16 C -0.05 -0.52 9.54 -39.19 -0.37 -0.89 16 17 C -0.13 -1.18 10.03 -39.64 -0.40 -1.58 16 18 C -0.05 -0.45 9.77 -39.49 -0.39 -0.84 16 19 C -0.15 -1.82 6.22 -39.50 -0.25 -2.07 16 20 Br -0.03 -0.35 33.28 -68.01 -2.26 -2.61 16 21 C 0.18 2.87 7.25 -38.93 -0.28 2.59 16 22 F -0.10 -1.83 15.01 2.25 0.03 -1.80 16 23 H 0.09 2.47 6.07 -51.93 -0.32 2.16 16 24 H 0.03 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.02 0.39 8.14 -51.93 -0.42 -0.04 16 26 H 0.27 7.01 8.31 -40.82 -0.34 6.67 16 27 H 0.39 6.59 6.57 -40.82 -0.27 6.32 16 28 H 0.15 1.39 6.40 -52.49 -0.34 1.06 16 29 H 0.14 0.78 8.06 -52.48 -0.42 0.36 16 30 H 0.14 0.94 8.06 -52.49 -0.42 0.51 16 LS Contribution 287.83 15.07 4.34 4.34 Total: -1.00 -31.04 287.83 -7.66 -38.70 By element: Atomic # 1 Polarization: 4.61 SS G_CDS: -2.54 Total: 2.07 kcal Atomic # 6 Polarization: -1.51 SS G_CDS: -2.63 Total: -4.14 kcal Atomic # 7 Polarization: -38.91 SS G_CDS: 0.35 Total: -38.56 kcal Atomic # 8 Polarization: -13.30 SS G_CDS: 0.08 Total: -13.22 kcal Atomic # 9 Polarization: -1.83 SS G_CDS: 0.03 Total: -1.80 kcal Atomic # 14 Polarization: 20.24 SS G_CDS: -5.02 Total: 15.22 kcal Atomic # 35 Polarization: -0.35 SS G_CDS: -2.26 Total: -2.61 kcal Total LS contribution 4.34 Total: 4.34 kcal Total: -31.04 -7.66 -38.70 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000191996682.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.359 kcal (2) G-P(sol) polarization free energy of solvation -31.041 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.399 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.657 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.28 seconds