Wall clock time and date at job start Tue Mar 31 2020 10:43:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.46501 * 120.00035 * 2 1 4 4 C 1.50699 * 109.47252 * 270.00128 * 3 2 1 5 5 H 1.08004 * 119.99462 * 359.97438 * 4 3 2 6 6 C 1.37868 * 120.00252 * 180.02562 * 4 3 2 7 7 N 1.31516 * 120.00029 * 359.97438 * 6 4 3 8 8 Si 1.86804 * 120.00141 * 179.97438 * 6 4 3 9 9 H 1.48497 * 109.46961 * 59.99865 * 8 6 4 10 10 H 1.48498 * 109.46985 * 179.97438 * 8 6 4 11 11 H 1.48494 * 109.47241 * 299.99732 * 8 6 4 12 12 C 1.34778 * 120.00075 * 179.97438 * 2 1 3 13 13 O 1.21569 * 119.99786 * 175.58879 * 12 2 1 14 14 C 1.47689 * 119.99874 * 355.59639 * 12 2 1 15 15 C 1.39675 * 120.16613 * 47.97748 * 14 12 2 16 16 C 1.37852 * 119.89536 * 179.78604 * 15 14 12 17 17 C 1.38450 * 120.23280 * 0.49121 * 16 15 14 18 18 C 1.38280 * 120.32580 * 359.74315 * 17 16 15 19 19 Br 1.89100 * 119.95025 * 180.02562 * 18 17 16 20 20 C 1.38411 * 120.09898 * 0.02562 * 18 17 16 21 21 F 1.35097 * 120.11346 * 180.02562 * 20 18 17 22 22 H 1.08994 * 109.47001 * 94.79837 * 1 2 3 23 23 H 1.09004 * 109.47218 * 214.79437 * 1 2 3 24 24 H 1.08998 * 109.47314 * 334.79233 * 1 2 3 25 25 H 1.08998 * 109.46896 * 29.99538 * 3 2 1 26 26 H 1.08995 * 109.47146 * 149.99785 * 3 2 1 27 27 H 0.97003 * 119.99880 * 180.02562 * 7 6 4 28 28 H 1.07999 * 120.04622 * 0.02746 * 15 14 12 29 29 H 1.08002 * 119.88171 * 180.22966 * 16 15 14 30 30 H 1.07993 * 119.83571 * 179.75793 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4487 1.7038 -1.4208 5 1 2.0980 1.0957 -2.2417 6 6 3.1268 2.8774 -1.6727 7 7 3.5542 3.6175 -0.6731 8 14 3.4388 3.4163 -3.4340 9 1 2.1415 3.5942 -4.1343 10 1 4.1812 4.7024 -3.4339 11 1 4.2412 2.3811 -4.1336 12 6 2.1389 -1.1672 0.0005 13 8 3.3519 -1.1687 -0.0805 14 6 1.4037 -2.4443 0.0993 15 6 0.2956 -2.6812 -0.7173 16 6 -0.3838 -3.8770 -0.6236 17 6 0.0221 -4.8401 0.2844 18 6 1.1148 -4.6135 1.1009 19 35 1.6605 -5.9366 2.3368 20 6 1.8099 -3.4196 1.0148 21 9 2.8779 -3.1981 1.8120 22 1 -0.3633 -0.0860 -1.0240 23 1 -0.3634 -0.8439 0.5864 24 1 -0.3634 0.9298 0.4377 25 1 1.6084 2.0284 0.5138 26 1 3.1498 1.1384 0.5138 27 1 4.0310 4.4435 -0.8504 28 1 -0.0259 -1.9303 -1.4238 29 1 -1.2384 -4.0615 -1.2578 30 1 -0.5173 -5.7731 0.3552 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000234294908.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:43:24 Heat of formation + Delta-G solvation = -42.380878 kcal Electronic energy + Delta-G solvation = -18171.225712 eV Core-core repulsion = 14927.792668 eV Total energy + Delta-G solvation = -3243.433044 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 315.001 amu Computer time = 0.26 seconds Orbital eigenvalues (eV) -48.93525 -39.87508 -38.10939 -34.97460 -32.98994 -32.37307 -31.01545 -29.48764 -27.78437 -26.13293 -24.20875 -22.73496 -22.29280 -19.28132 -17.61900 -16.82014 -16.75694 -16.44598 -15.91235 -15.32039 -15.14182 -14.52740 -14.19720 -14.08869 -13.25523 -13.04017 -12.89942 -12.58556 -12.18317 -12.12301 -12.04435 -11.43195 -11.32579 -11.02727 -10.93300 -10.59983 -10.54243 -10.20173 -9.70750 -9.29092 -9.00900 -8.88036 -8.45922 -7.77382 -6.07264 -4.12466 0.62251 0.78110 1.27437 2.95921 3.30396 3.35301 3.38082 3.48159 3.70687 3.98450 4.41150 4.50622 4.62496 4.86010 4.87419 5.24502 5.29320 5.53401 5.60379 5.66288 5.80807 5.89432 5.99319 6.08250 6.41455 6.94595 7.34959 7.42576 7.87518 8.17098 8.23138 8.78454 8.94342 9.52405 11.00965 Molecular weight = 315.00amu Principal moments of inertia in cm(-1) A = 0.032986 B = 0.003587 C = 0.003424 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 848.629512 B = 7804.280448 C = 8176.686415 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.080 3.920 2 N -0.591 5.591 3 C 0.246 3.754 4 C -0.528 4.528 5 H 0.057 0.943 6 C 0.062 3.938 7 N -0.894 5.894 8 Si 0.899 3.101 9 H -0.277 1.277 10 H -0.286 1.286 11 H -0.276 1.276 12 C 0.545 3.455 13 O -0.518 6.518 14 C -0.142 4.142 15 C -0.048 4.048 16 C -0.132 4.132 17 C -0.053 4.053 18 C -0.140 4.140 19 Br -0.031 7.031 20 C 0.170 3.830 21 F -0.108 7.108 22 H 0.053 0.947 23 H 0.056 0.944 24 H 0.074 0.926 25 H 0.037 0.963 26 H 0.045 0.955 27 H 0.265 0.735 28 H 0.149 0.851 29 H 0.143 0.857 30 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.819 -19.113 4.286 22.877 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.322 5.322 3 C 0.127 3.873 4 C -0.567 4.567 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.533 5.533 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.201 1.201 12 C 0.330 3.670 13 O -0.394 6.394 14 C -0.148 4.148 15 C -0.067 4.067 16 C -0.151 4.151 17 C -0.073 4.073 18 C -0.221 4.221 19 Br 0.054 6.946 20 C 0.148 3.852 21 F -0.086 7.086 22 H 0.071 0.929 23 H 0.075 0.925 24 H 0.092 0.908 25 H 0.054 0.946 26 H 0.063 0.937 27 H 0.074 0.926 28 H 0.167 0.833 29 H 0.161 0.839 30 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -10.808 -19.369 4.801 22.694 hybrid contribution 0.197 0.702 -1.124 1.339 sum -10.612 -18.667 3.677 21.785 Atomic orbital electron populations 1.21838 0.81256 1.02364 1.00896 1.48096 1.06341 1.07395 1.70402 1.19396 0.92587 0.77449 0.97820 1.21350 1.36894 1.06384 0.92078 0.92438 1.24929 0.95225 0.96334 0.97528 1.69920 1.38167 1.14364 1.30847 0.86538 0.78377 0.77863 0.84531 1.20222 1.21123 1.20132 1.17808 0.87214 0.82923 0.79062 1.90823 1.13120 1.86543 1.48952 1.20403 0.98804 0.96531 0.99025 1.21588 0.91448 0.97409 0.96267 1.21162 1.01286 0.93150 0.99464 1.21113 0.93380 0.99868 0.92936 1.21824 1.02228 0.94649 1.03387 1.96741 1.90994 1.50042 1.56795 1.17324 0.85104 0.92351 0.90431 1.91617 1.51985 1.94528 1.70489 0.92900 0.92497 0.90773 0.94553 0.93742 0.92572 0.83344 0.83882 0.83887 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.22 9.09 59.85 0.54 1.77 16 2 N -0.59 -12.53 2.86 -184.14 -0.53 -13.06 16 3 C 0.25 6.41 5.17 -5.19 -0.03 6.38 16 4 C -0.53 -14.86 9.39 -34.44 -0.32 -15.18 16 5 H 0.06 1.60 7.81 -52.48 -0.41 1.19 16 6 C 0.06 1.77 5.46 -17.82 -0.10 1.67 16 7 N -0.89 -26.45 13.29 55.43 0.74 -25.72 16 8 Si 0.90 21.70 29.54 -169.99 -5.02 16.68 16 9 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 10 H -0.29 -6.79 7.11 56.52 0.40 -6.39 16 11 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 12 C 0.55 11.82 7.02 -12.40 -0.09 11.74 16 13 O -0.52 -13.72 16.24 5.30 0.09 -13.63 16 14 C -0.14 -2.35 4.93 -104.92 -0.52 -2.87 16 15 C -0.05 -0.59 7.75 -39.19 -0.30 -0.89 16 16 C -0.13 -1.19 10.03 -39.64 -0.40 -1.58 16 17 C -0.05 -0.51 9.77 -39.49 -0.39 -0.89 16 18 C -0.14 -1.77 6.22 -39.50 -0.25 -2.02 16 19 Br -0.03 -0.35 33.28 -68.01 -2.26 -2.62 16 20 C 0.17 2.73 7.22 -38.93 -0.28 2.45 16 21 F -0.11 -2.00 15.95 2.25 0.04 -1.96 16 22 H 0.05 0.72 7.05 -51.93 -0.37 0.35 16 23 H 0.06 0.71 6.22 -51.93 -0.32 0.39 16 24 H 0.07 1.09 7.84 -51.93 -0.41 0.68 16 25 H 0.04 0.94 7.86 -51.93 -0.41 0.54 16 26 H 0.04 1.31 7.49 -51.93 -0.39 0.92 16 27 H 0.26 7.40 8.31 -40.82 -0.34 7.06 16 28 H 0.15 1.63 6.21 -52.49 -0.33 1.31 16 29 H 0.14 0.80 8.06 -52.49 -0.42 0.37 16 30 H 0.14 0.94 8.06 -52.49 -0.42 0.52 16 LS Contribution 289.41 15.07 4.36 4.36 Total: -1.00 -33.45 289.41 -7.32 -40.77 By element: Atomic # 1 Polarization: -2.78 SS G_CDS: -2.61 Total: -5.39 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -2.12 Total: 0.57 kcal Atomic # 7 Polarization: -38.99 SS G_CDS: 0.21 Total: -38.78 kcal Atomic # 8 Polarization: -13.72 SS G_CDS: 0.09 Total: -13.63 kcal Atomic # 9 Polarization: -2.00 SS G_CDS: 0.04 Total: -1.96 kcal Atomic # 14 Polarization: 21.70 SS G_CDS: -5.02 Total: 16.68 kcal Atomic # 35 Polarization: -0.35 SS G_CDS: -2.26 Total: -2.62 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -33.45 -7.32 -40.77 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000234294908.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.612 kcal (2) G-P(sol) polarization free energy of solvation -33.447 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.322 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.381 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.26 seconds