Wall clock time and date at job start Tue Mar 31 2020 10:55:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.40273 * 126.63730 * 2 1 4 4 C 1.35310 * 107.11986 * 180.02562 * 3 2 1 5 5 Br 1.89098 * 125.62931 * 180.02562 * 4 3 2 6 6 O 1.33948 * 108.74049 * 359.73933 * 4 3 2 7 7 C 1.34972 * 109.37044 * 0.43430 * 6 4 3 8 8 C 1.46552 * 125.97972 * 179.82829 * 7 6 4 9 9 O 1.21711 * 119.99661 * 185.75978 * 8 7 6 10 10 N 1.34776 * 120.00465 * 5.75834 * 8 7 6 11 11 C 1.46500 * 119.99447 * 356.16660 * 10 8 7 12 12 C 1.46497 * 120.00092 * 176.16836 * 10 8 7 13 13 H 1.08997 * 109.47151 * 359.97438 * 12 10 8 14 14 C 1.53002 * 109.46888 * 240.00021 * 12 10 8 15 15 C 1.50698 * 109.47076 * 119.99898 * 12 10 8 16 16 H 1.08007 * 120.00323 * 0.02562 * 15 12 10 17 17 C 1.37880 * 119.99880 * 179.97438 * 15 12 10 18 18 N 1.31505 * 120.00052 * 0.02562 * 17 15 12 19 19 Si 1.86806 * 119.99899 * 179.97438 * 17 15 12 20 20 H 1.48498 * 109.46887 * 60.00235 * 19 17 15 21 21 H 1.48502 * 109.47072 * 180.02562 * 19 17 15 22 22 H 1.48496 * 109.47062 * 300.00332 * 19 17 15 23 23 H 1.08997 * 109.46795 * 269.95554 * 1 2 3 24 24 H 1.09005 * 109.46728 * 29.95207 * 1 2 3 25 25 H 1.08991 * 109.47099 * 149.95378 * 1 2 3 26 26 H 1.08005 * 126.43929 * 0.04232 * 3 2 1 27 27 H 1.09000 * 109.47152 * 275.71295 * 11 10 8 28 28 H 1.08995 * 109.47589 * 35.71401 * 11 10 8 29 29 H 1.09004 * 109.47062 * 155.71915 * 11 10 8 30 30 H 1.09007 * 109.46940 * 299.99836 * 14 12 10 31 31 H 1.09000 * 109.47088 * 180.02562 * 14 12 10 32 32 H 1.08997 * 109.47391 * 59.99531 * 14 12 10 33 33 H 0.97007 * 120.00421 * 180.02562 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3441 1.1256 0.0000 4 6 3.6195 0.6735 -0.0006 5 35 5.1712 1.7542 -0.0002 6 8 3.6013 -0.6658 0.0048 7 6 2.3220 -1.0962 -0.0007 8 6 1.8842 -2.4948 -0.0010 9 8 0.7020 -2.7623 -0.1120 10 7 2.7904 -3.4848 0.1217 11 6 4.2198 -3.1673 0.1708 12 6 2.3462 -4.8782 0.2059 13 1 1.2581 -4.9165 0.1533 14 6 2.8138 -5.4834 1.5310 15 6 2.9328 -5.6625 -0.9394 16 1 3.5730 -5.1722 -1.6579 17 6 2.6532 -7.0064 -1.0694 18 7 1.8742 -7.6036 -0.1943 19 14 3.3799 -7.9785 -2.4895 20 1 4.8622 -7.9257 -2.4182 21 1 2.9297 -9.3910 -2.4041 22 1 2.9250 -7.3913 -3.7753 23 1 -0.3633 -0.0008 1.0277 24 1 -0.3633 0.8905 -0.5131 25 1 -0.3633 -0.8895 -0.5145 26 1 2.0297 2.1589 0.0006 27 1 4.6048 -3.0672 -0.8440 28 1 4.3657 -2.2307 0.7088 29 1 4.7524 -3.9680 0.6842 30 1 3.9019 -5.4451 1.5840 31 1 2.4837 -6.5203 1.5935 32 1 2.3896 -4.9161 2.3594 33 1 1.6777 -8.5492 -0.2855 RHF calculation, no. of doubly occupied orbitals= 47 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000264114325.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:55:28 Heat of formation + Delta-G solvation = -8.792876 kcal Electronic energy + Delta-G solvation = -18819.155091 eV Core-core repulsion = 15700.638838 eV Total energy + Delta-G solvation = -3118.516254 eV No. of doubly occupied orbitals = 47 Molecular weight (most abundant/longest-lived isotopes) = 315.026 amu Computer time = 0.33 seconds Orbital eigenvalues (eV) -42.74605 -38.91590 -35.70834 -34.07456 -32.91477 -32.33965 -29.99773 -29.01630 -27.40712 -26.13113 -25.24304 -22.73926 -21.68715 -20.16104 -19.00926 -17.05572 -16.69498 -16.33582 -15.90793 -15.36902 -14.41059 -14.26432 -13.74221 -13.44012 -13.12154 -12.94176 -12.66616 -12.59108 -12.41102 -11.80383 -11.59331 -11.51146 -11.31608 -11.08521 -10.85554 -10.84713 -10.74297 -10.31297 -10.20414 -9.70122 -9.37837 -9.21072 -8.51590 -8.46793 -7.70280 -6.10837 -4.19085 0.69058 1.04363 2.18695 3.10257 3.27379 3.32225 3.34633 3.63773 3.86573 4.37508 4.69402 4.92246 5.16203 5.20721 5.45052 5.52225 5.82850 5.85970 5.88613 6.08936 6.15174 6.31581 6.45545 6.68995 6.72995 6.79254 6.98101 7.30942 7.41572 7.65603 7.94205 8.10683 8.36470 8.67833 8.87633 9.47217 10.94537 Molecular weight = 315.03amu Principal moments of inertia in cm(-1) A = 0.021235 B = 0.003971 C = 0.003587 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1318.272666 B = 7050.266479 C = 7803.405043 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 C -0.107 4.107 3 C -0.160 4.160 4 C -0.025 4.025 5 Br 0.047 6.953 6 O -0.137 6.137 7 C -0.033 4.033 8 C 0.583 3.417 9 O -0.523 6.523 10 N -0.576 5.576 11 C 0.081 3.919 12 C 0.258 3.742 13 H 0.067 0.933 14 C -0.148 4.148 15 C -0.528 4.528 16 H 0.060 0.940 17 C 0.066 3.934 18 N -0.887 5.887 19 Si 0.900 3.100 20 H -0.276 1.276 21 H -0.286 1.286 22 H -0.276 1.276 23 H 0.072 0.928 24 H 0.065 0.935 25 H 0.093 0.907 26 H 0.161 0.839 27 H 0.051 0.949 28 H 0.064 0.936 29 H 0.081 0.919 30 H 0.032 0.968 31 H 0.097 0.903 32 H 0.013 0.987 33 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.600 19.355 2.183 20.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.110 4.110 3 C -0.182 4.182 4 C -0.155 4.155 5 Br 0.131 6.869 6 O -0.033 6.033 7 C -0.087 4.087 8 C 0.368 3.632 9 O -0.403 6.403 10 N -0.305 5.305 11 C -0.062 4.062 12 C 0.158 3.842 13 H 0.085 0.915 14 C -0.207 4.207 15 C -0.566 4.566 16 H 0.078 0.922 17 C -0.136 4.136 18 N -0.525 5.525 19 Si 0.728 3.272 20 H -0.202 1.202 21 H -0.211 1.211 22 H -0.202 1.202 23 H 0.091 0.909 24 H 0.084 0.916 25 H 0.112 0.888 26 H 0.179 0.821 27 H 0.070 0.930 28 H 0.082 0.918 29 H 0.099 0.901 30 H 0.051 0.949 31 H 0.115 0.885 32 H 0.032 0.968 33 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 5.756 19.151 2.178 20.116 hybrid contribution 0.347 -0.567 -0.774 1.020 sum 6.103 18.585 1.404 19.611 Atomic orbital electron populations 1.20421 0.87691 1.03879 1.02910 1.20568 0.97916 0.90277 1.02274 1.21521 0.89838 1.00569 1.06311 1.24172 0.94516 0.83888 1.12900 1.96827 1.33057 1.59192 1.97852 1.84480 1.29068 1.19340 1.70455 1.22773 0.80227 0.96061 1.09667 1.16652 0.86183 0.81275 0.79099 1.90810 1.15944 1.81423 1.52125 1.48278 1.05865 1.08702 1.67637 1.21804 0.82138 1.00642 1.01596 1.19086 0.97711 0.73219 0.94162 0.91535 1.22122 0.98874 1.03880 0.95785 1.21248 1.31014 0.94038 1.10324 0.92220 1.24876 0.94912 0.97451 0.96392 1.69857 1.36071 1.11374 1.35238 0.86522 0.79353 0.78820 0.82511 1.20192 1.21109 1.20197 0.90926 0.91627 0.88823 0.82089 0.92994 0.91810 0.90071 0.94922 0.88492 0.96797 0.92533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.26 9.88 36.01 0.36 -0.90 16 2 C -0.11 -1.63 6.19 -104.45 -0.65 -2.28 16 3 C -0.16 -2.04 10.78 -39.86 -0.43 -2.47 16 4 C -0.02 -0.34 7.80 29.69 0.23 -0.11 16 5 Br 0.05 0.49 34.09 -68.01 -2.32 -1.83 16 6 O -0.14 -2.20 7.25 4.78 0.03 -2.17 16 7 C -0.03 -0.59 6.78 -36.82 -0.25 -0.84 16 8 C 0.58 12.54 7.64 -12.91 -0.10 12.45 16 9 O -0.52 -12.52 14.05 5.18 0.07 -12.45 16 10 N -0.58 -12.68 2.75 -176.86 -0.49 -13.17 16 11 C 0.08 1.49 8.88 59.85 0.53 2.02 16 12 C 0.26 6.55 2.63 -69.08 -0.18 6.36 16 13 H 0.07 1.92 6.90 -51.93 -0.36 1.56 16 14 C -0.15 -3.50 8.96 37.16 0.33 -3.17 16 15 C -0.53 -14.23 8.37 -34.44 -0.29 -14.52 16 16 H 0.06 1.60 7.65 -52.48 -0.40 1.20 16 17 C 0.07 1.79 5.30 -17.82 -0.09 1.70 16 18 N -0.89 -24.76 11.32 55.43 0.63 -24.14 16 19 Si 0.90 20.97 29.54 -169.99 -5.02 15.95 16 20 H -0.28 -6.30 7.11 56.52 0.40 -5.90 16 21 H -0.29 -6.58 7.11 56.52 0.40 -6.18 16 22 H -0.28 -6.48 7.11 56.52 0.40 -6.07 16 23 H 0.07 0.92 8.14 -51.93 -0.42 0.49 16 24 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 25 H 0.09 1.51 6.34 -51.93 -0.33 1.18 16 26 H 0.16 1.53 8.06 -52.48 -0.42 1.11 16 27 H 0.05 0.93 8.14 -51.93 -0.42 0.50 16 28 H 0.06 1.05 5.31 -51.93 -0.28 0.77 16 29 H 0.08 1.46 6.44 -51.93 -0.33 1.12 16 30 H 0.03 0.71 6.67 -51.92 -0.35 0.37 16 31 H 0.10 2.50 6.07 -51.93 -0.32 2.18 16 32 H 0.01 0.29 8.14 -51.93 -0.42 -0.13 16 33 H 0.26 7.04 8.31 -40.82 -0.34 6.70 16 LS Contribution 297.83 15.07 4.49 4.49 Total: -1.00 -29.13 297.83 -6.75 -35.88 By element: Atomic # 1 Polarization: 2.79 SS G_CDS: -3.61 Total: -0.82 kcal Atomic # 6 Polarization: -1.21 SS G_CDS: -0.54 Total: -1.74 kcal Atomic # 7 Polarization: -37.45 SS G_CDS: 0.14 Total: -37.31 kcal Atomic # 8 Polarization: -14.72 SS G_CDS: 0.11 Total: -14.61 kcal Atomic # 14 Polarization: 20.97 SS G_CDS: -5.02 Total: 15.95 kcal Atomic # 35 Polarization: 0.49 SS G_CDS: -2.32 Total: -1.83 kcal Total LS contribution 4.49 Total: 4.49 kcal Total: -29.13 -6.75 -35.88 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000264114325.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 27.088 kcal (2) G-P(sol) polarization free energy of solvation -29.132 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.043 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.750 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.881 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.33 seconds