Wall clock time and date at job start Tue Mar 31 2020 10:48:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50705 * 1 3 3 N 1.31902 * 119.60849 * 2 1 4 4 C 1.31946 * 121.70799 * 179.97438 * 3 2 1 5 5 Cl 1.73598 * 119.63954 * 179.72795 * 4 3 2 6 6 C 1.38395 * 120.72916 * 0.02562 * 4 3 2 7 7 C 1.38565 * 119.15016 * 0.02562 * 6 4 3 8 8 C 1.38142 * 119.60585 * 180.02562 * 2 1 3 9 9 S 1.76205 * 120.40792 * 0.02562 * 8 2 1 10 10 O 1.42092 * 106.40425 * 177.02547 * 9 8 2 11 11 O 1.42102 * 106.39939 * 309.95139 * 9 8 2 12 12 N 1.65603 * 107.21311 * 63.48595 * 9 8 2 13 13 C 1.36940 * 120.00186 * 261.57444 * 12 9 8 14 14 H 1.08000 * 119.99495 * 8.17447 * 13 12 9 15 15 C 1.38811 * 119.99934 * 188.17952 * 13 12 9 16 16 N 1.31616 * 120.00140 * 18.39679 * 15 13 12 17 17 Si 1.86796 * 119.99730 * 198.39758 * 15 13 12 18 18 H 1.48498 * 109.47108 * 90.00125 * 17 15 13 19 19 H 1.48503 * 109.47264 * 209.99860 * 17 15 13 20 20 H 1.48499 * 109.47376 * 329.99602 * 17 15 13 21 21 C 1.46504 * 119.99833 * 81.57517 * 12 9 8 22 22 C 1.47197 * 109.47026 * 93.01521 * 21 12 9 23 23 N 6.54878 * 83.73923 * 207.14859 * 2 1 3 24 24 H 1.08995 * 109.47609 * 97.01662 * 1 2 3 25 25 H 1.09001 * 109.47110 * 217.01749 * 1 2 3 26 26 H 1.09000 * 109.47143 * 337.01115 * 1 2 3 27 27 H 1.08005 * 120.43006 * 179.97438 * 6 4 3 28 28 H 1.08000 * 120.78397 * 180.02562 * 7 6 4 29 29 H 0.96996 * 120.00281 * 180.02562 * 16 15 13 30 30 H 1.09000 * 109.47178 * 213.01378 * 21 12 9 31 31 H 1.08996 * 109.47332 * 333.01609 * 21 12 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 7 2.1587 1.1468 0.0000 4 6 3.4773 1.1951 0.0005 5 17 4.2800 2.7344 -0.0067 6 6 4.2276 0.0322 0.0005 7 6 3.5766 -1.1910 -0.0005 8 6 2.1895 -1.2011 -0.0005 9 16 1.3088 -2.7273 -0.0019 10 8 2.2873 -3.7551 -0.0729 11 8 0.3497 -2.6380 1.0428 12 7 0.4528 -2.7978 -1.4178 13 6 -0.8736 -2.4580 -1.4336 14 1 -1.3292 -2.0195 -0.5580 15 6 -1.6327 -2.6772 -2.5750 16 7 -1.2098 -3.5179 -3.4951 17 14 -3.2543 -1.7790 -2.8049 18 1 -3.0135 -0.4959 -3.5125 19 1 -4.1772 -2.6212 -3.6075 20 1 -3.8615 -1.5060 -1.4775 21 6 1.1147 -3.2239 -2.6534 22 6 0.9333 -4.6736 -2.8324 23 7 0.7929 -5.7925 -2.9704 24 1 -0.3634 -0.1255 -1.0199 25 1 -0.3633 -0.8205 0.6187 26 1 -0.3633 0.9460 0.4014 27 1 5.3067 0.0774 0.0005 28 1 4.1360 -2.1149 -0.0001 29 1 -1.7399 -3.6708 -4.2929 30 1 0.6772 -2.6957 -3.5006 31 1 2.1787 -2.9956 -2.5930 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000287031773.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:48:25 Heat of formation + Delta-G solvation = 8.225282 kcal Electronic energy + Delta-G solvation = -22267.041085 eV Core-core repulsion = 18702.903008 eV Total energy + Delta-G solvation = -3564.138078 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 315.023 amu Computer time = 2.42 seconds Orbital eigenvalues (eV) -40.27894 -36.90154 -36.76597 -36.68926 -35.18946 -34.42878 -33.03026 -32.34300 -31.59227 -27.98827 -27.18754 -24.27555 -23.85796 -22.40554 -19.06341 -18.14789 -17.94081 -17.09889 -16.86492 -16.51355 -15.91482 -14.94561 -14.74708 -14.50198 -14.12206 -13.75539 -13.37416 -13.14647 -12.89360 -12.77726 -12.32020 -12.17996 -11.81517 -11.61462 -11.58506 -11.48645 -11.41297 -11.22525 -11.17491 -11.02233 -10.73221 -10.54561 -10.30734 -10.19610 -10.06296 -9.78663 -9.57933 -9.05983 -8.46916 -6.53075 -4.12296 0.48581 1.00217 1.09137 1.60546 3.09507 3.17958 3.20226 3.31717 3.59887 4.03607 4.20795 4.24731 4.28691 4.43311 4.70168 4.72944 4.79522 4.94299 5.23633 5.35120 5.48660 5.58308 5.72335 5.82818 6.03712 6.11408 6.26354 6.45591 6.63603 6.87153 7.32978 7.60272 8.08599 8.59278 8.95604 9.00164 10.49200 Molecular weight = 315.02amu Principal moments of inertia in cm(-1) A = 0.016010 B = 0.005643 C = 0.004827 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1748.481546 B = 4961.007391 C = 5798.844673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C 0.263 3.737 3 N -0.499 5.499 4 C 0.220 3.780 5 Cl -0.034 7.034 6 C -0.193 4.193 7 C 0.033 3.967 8 C -0.735 4.735 9 S 2.661 3.339 10 O -0.968 6.968 11 O -0.953 6.953 12 N -0.836 5.836 13 C -0.327 4.327 14 H 0.125 0.875 15 C 0.047 3.953 16 N -0.872 5.872 17 Si 0.915 3.085 18 H -0.274 1.274 19 H -0.284 1.284 20 H -0.266 1.266 21 C 0.240 3.760 22 C 0.263 3.737 23 N -0.481 5.481 24 H 0.120 0.880 25 H 0.119 0.881 26 H 0.084 0.916 27 H 0.149 0.851 28 H 0.161 0.839 29 H 0.275 0.725 30 H 0.135 0.865 31 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.120 10.046 2.905 13.240 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C 0.125 3.875 3 N -0.211 5.211 4 C 0.055 3.945 5 Cl -0.005 7.005 6 C -0.214 4.214 7 C 0.006 3.994 8 C -0.817 4.817 9 S 2.748 3.252 10 O -0.958 6.958 11 O -0.942 6.942 12 N -0.668 5.668 13 C -0.458 4.458 14 H 0.143 0.857 15 C -0.159 4.159 16 N -0.512 5.512 17 Si 0.741 3.259 18 H -0.200 1.200 19 H -0.210 1.210 20 H -0.190 1.190 21 C 0.111 3.889 22 C -0.056 4.056 23 N -0.161 5.161 24 H 0.138 0.862 25 H 0.137 0.863 26 H 0.103 0.897 27 H 0.167 0.833 28 H 0.179 0.821 29 H 0.086 0.914 30 H 0.153 0.847 31 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 7.552 8.698 3.249 11.968 hybrid contribution 0.073 1.142 -0.535 1.264 sum 7.625 9.840 2.713 12.741 Atomic orbital electron populations 1.21978 0.86621 1.06345 1.07158 1.20937 0.97079 0.85212 0.84283 1.66981 1.07889 1.30490 1.15785 1.21884 0.90377 0.87364 0.94845 1.98406 1.76728 1.29269 1.96118 1.21836 1.01681 0.91367 1.06564 1.21421 0.92381 0.98743 0.86860 1.32888 1.07077 1.24587 1.17131 1.03745 0.72696 0.74723 0.74058 1.93519 1.61791 1.53576 1.86902 1.93458 1.59743 1.86606 1.54429 1.53201 1.17021 1.74606 1.21968 1.19630 0.81880 1.42399 1.01921 0.85739 1.25084 0.99521 0.95658 0.95665 1.69814 1.40037 1.30301 1.11046 0.86094 0.81301 0.79393 0.79065 1.19994 1.20969 1.19009 1.18372 0.94709 0.84027 0.91839 1.28916 0.90012 0.94553 0.92122 1.80856 1.11935 1.14100 1.09244 0.86202 0.86267 0.89741 0.83294 0.82110 0.91380 0.84728 0.90745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 81. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.58 8.14 36.01 0.29 -2.29 16 2 C 0.26 4.33 6.78 -82.60 -0.56 3.77 16 3 N -0.50 -8.02 10.25 -6.62 -0.07 -8.09 16 4 C 0.22 3.09 7.27 -17.44 -0.13 2.97 16 5 Cl -0.03 -0.40 29.11 -51.86 -1.51 -1.91 16 6 C -0.19 -2.38 9.88 -39.40 -0.39 -2.77 16 7 C 0.03 0.45 9.66 -39.28 -0.38 0.07 16 8 C -0.74 -11.99 5.92 -39.44 -0.23 -12.23 16 9 S 2.66 51.04 4.98 -107.50 -0.54 50.50 16 10 O -0.97 -19.78 16.35 -57.17 -0.93 -20.71 16 11 O -0.95 -20.15 14.36 -57.17 -0.82 -20.97 16 12 N -0.84 -16.90 2.83 -62.77 -0.18 -17.07 16 13 C -0.33 -7.00 7.15 -15.06 -0.11 -7.10 16 14 H 0.13 2.57 5.44 -52.49 -0.29 2.28 16 15 C 0.05 1.03 5.08 -17.43 -0.09 0.95 16 16 N -0.87 -20.20 8.64 55.49 0.48 -19.72 16 17 Si 0.92 17.61 29.59 -169.99 -5.03 12.58 16 18 H -0.27 -5.15 7.11 56.52 0.40 -4.75 16 19 H -0.28 -5.73 7.11 56.52 0.40 -5.33 16 20 H -0.27 -5.06 7.11 56.52 0.40 -4.66 16 21 C 0.24 4.61 5.10 -6.83 -0.03 4.57 16 22 C 0.26 5.96 13.35 -20.76 -0.28 5.68 16 23 N -0.48 -11.84 18.54 42.16 0.78 -11.06 16 24 H 0.12 1.86 6.60 -51.93 -0.34 1.52 16 25 H 0.12 2.02 4.16 -51.93 -0.22 1.80 16 26 H 0.08 1.17 8.14 -51.93 -0.42 0.74 16 27 H 0.15 1.32 8.06 -52.48 -0.42 0.90 16 28 H 0.16 1.88 7.44 -52.49 -0.39 1.49 16 29 H 0.27 6.25 8.31 -40.82 -0.34 5.91 16 30 H 0.14 2.56 6.27 -51.93 -0.33 2.24 16 31 H 0.07 1.14 7.90 -51.93 -0.41 0.73 16 LS Contribution 296.63 15.07 4.47 4.47 Total: -1.00 -28.30 296.63 -7.20 -35.50 By element: Atomic # 1 Polarization: 4.83 SS G_CDS: -1.95 Total: 2.88 kcal Atomic # 6 Polarization: -4.49 SS G_CDS: -1.90 Total: -6.39 kcal Atomic # 7 Polarization: -56.97 SS G_CDS: 1.02 Total: -55.95 kcal Atomic # 8 Polarization: -39.93 SS G_CDS: -1.76 Total: -41.69 kcal Atomic # 14 Polarization: 17.61 SS G_CDS: -5.03 Total: 12.58 kcal Atomic # 16 Polarization: 51.04 SS G_CDS: -0.54 Total: 50.50 kcal Atomic # 17 Polarization: -0.40 SS G_CDS: -1.51 Total: -1.91 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -28.30 -7.20 -35.50 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000287031773.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.727 kcal (2) G-P(sol) polarization free energy of solvation -28.302 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.426 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.200 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.502 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.225 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.42 seconds