Wall clock time and date at job start Tue Mar 31 2020 10:28:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.38134 * 120.08503 * 2 1 4 4 F 1.35103 * 119.95347 * 0.02562 * 3 2 1 5 5 C 1.38678 * 120.09262 * 180.30136 * 3 2 1 6 6 Br 1.89101 * 119.87231 * 179.71925 * 5 3 2 7 7 C 1.38468 * 120.25891 * 359.44606 * 5 3 2 8 8 C 1.37879 * 120.16875 * 0.27859 * 7 5 3 9 9 C 1.39636 * 120.08968 * 179.74897 * 2 1 3 10 10 C 1.47692 * 120.12415 * 359.95253 * 9 2 1 11 11 O 1.21596 * 120.00152 * 303.35981 * 10 9 2 12 12 N 1.34780 * 119.99727 * 123.35784 * 10 9 2 13 13 C 1.46501 * 120.00160 * 3.80698 * 12 10 9 14 14 C 1.36875 * 119.99713 * 183.80516 * 12 10 9 15 15 H 1.07999 * 120.00256 * 351.50304 * 14 12 10 16 16 C 1.39041 * 120.00039 * 171.51117 * 14 12 10 17 17 N 1.31373 * 119.99890 * 7.80875 * 16 14 12 18 18 Si 1.86801 * 120.00218 * 187.80952 * 16 14 12 19 19 H 1.48500 * 109.47061 * 59.99739 * 18 16 14 20 20 H 1.48495 * 109.47368 * 179.97438 * 18 16 14 21 21 H 1.48496 * 109.47008 * 299.99773 * 18 16 14 22 22 H 1.09001 * 109.46878 * 273.25822 * 1 2 3 23 23 H 1.08999 * 109.47199 * 33.25792 * 1 2 3 24 24 H 1.08997 * 109.47452 * 153.26345 * 1 2 3 25 25 H 1.07995 * 119.91474 * 180.29427 * 7 5 3 26 26 H 1.08003 * 120.04541 * 180.02562 * 8 7 5 27 27 H 1.08998 * 109.46810 * 356.70388 * 13 12 10 28 28 H 1.09006 * 109.47004 * 116.70046 * 13 12 10 29 29 H 1.08991 * 109.46782 * 236.69869 * 13 12 10 30 30 H 0.96998 * 119.99615 * 180.02562 * 17 16 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1994 1.1952 0.0000 4 9 1.5247 2.3657 0.0005 5 6 3.5862 1.1954 -0.0063 6 35 4.5278 2.8353 -0.0143 7 6 4.2842 -0.0005 -0.0011 8 6 3.6039 -1.1997 0.0047 9 6 2.2071 -1.2082 0.0053 10 6 1.4734 -2.4900 0.0120 11 8 0.6694 -2.7258 0.8932 12 7 1.6950 -3.3983 -0.9588 13 6 2.7228 -3.1506 -1.9730 14 6 0.9597 -4.5522 -0.9971 15 1 0.3011 -4.8002 -0.1780 16 6 1.0609 -5.4051 -2.0905 17 7 1.9706 -5.1857 -3.0127 18 14 -0.0965 -6.8628 -2.2484 19 1 -1.4991 -6.3778 -2.3002 20 1 0.2149 -7.6096 -3.4935 21 1 0.0743 -7.7594 -1.0770 22 1 -0.3633 0.0584 1.0260 23 1 -0.3633 0.8593 -0.5636 24 1 -0.3634 -0.9177 -0.4623 25 1 5.3641 0.0062 -0.0012 26 1 4.1503 -2.1313 0.0091 27 1 3.1584 -2.1640 -1.8154 28 1 3.5020 -3.9087 -1.8932 29 1 2.2728 -3.1951 -2.9646 30 1 2.0409 -5.7805 -3.7756 RHF calculation, no. of doubly occupied orbitals= 46 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000597012262.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:28:54 Heat of formation + Delta-G solvation = -35.128452 kcal Electronic energy + Delta-G solvation = -18439.117587 eV Core-core repulsion = 15195.999032 eV Total energy + Delta-G solvation = -3243.118555 eV No. of doubly occupied orbitals = 46 Molecular weight (most abundant/longest-lived isotopes) = 315.001 amu Computer time = 0.30 seconds Orbital eigenvalues (eV) -48.85546 -39.74117 -37.60893 -34.94881 -32.99856 -32.10156 -31.26560 -29.33051 -27.09689 -26.38640 -24.75985 -22.74077 -21.69800 -19.61465 -17.49549 -16.97311 -16.53259 -15.82365 -15.60205 -15.48720 -14.61414 -14.23617 -14.01337 -13.49664 -13.06972 -13.05251 -12.74242 -12.48454 -12.29912 -11.83315 -11.58651 -11.37951 -11.17141 -11.14320 -11.00197 -10.59697 -10.52290 -10.33104 -10.23900 -9.16914 -8.73213 -8.56827 -8.38113 -8.06148 -6.43772 -3.96982 0.90033 1.23373 1.52052 3.05827 3.15127 3.18589 3.35165 3.80262 3.99934 4.18675 4.60746 4.81239 5.01743 5.05880 5.23860 5.35245 5.52963 5.81362 5.97504 6.00063 6.06063 6.17395 6.30017 6.42958 6.59122 6.83105 6.92756 7.26994 7.40577 7.87335 8.29348 8.98618 9.21920 9.77238 10.47909 Molecular weight = 315.00amu Principal moments of inertia in cm(-1) A = 0.032402 B = 0.003889 C = 0.003641 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 863.935298 B = 7197.349233 C = 7689.210149 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.109 4.109 2 C -0.081 4.081 3 C 0.118 3.882 4 F -0.126 7.126 5 C -0.130 4.130 6 Br -0.044 7.044 7 C -0.075 4.075 8 C -0.099 4.099 9 C -0.039 4.039 10 C 0.460 3.540 11 O -0.585 6.585 12 N -0.424 5.424 13 C 0.098 3.902 14 C -0.300 4.300 15 H 0.109 0.891 16 C 0.030 3.970 17 N -0.875 5.875 18 Si 0.935 3.065 19 H -0.271 1.271 20 H -0.282 1.282 21 H -0.271 1.271 22 H 0.079 0.921 23 H 0.065 0.935 24 H 0.083 0.917 25 H 0.141 0.859 26 H 0.142 0.858 27 H 0.032 0.968 28 H 0.062 0.938 29 H 0.087 0.913 30 H 0.270 0.730 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.439 12.528 1.531 14.169 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.165 4.165 2 C -0.083 4.083 3 C 0.097 3.903 4 F -0.105 7.105 5 C -0.210 4.210 6 Br 0.041 6.959 7 C -0.095 4.095 8 C -0.119 4.119 9 C -0.044 4.044 10 C 0.249 3.751 11 O -0.472 6.472 12 N -0.140 5.140 13 C -0.046 4.046 14 C -0.428 4.428 15 H 0.126 0.874 16 C -0.173 4.173 17 N -0.515 5.515 18 Si 0.761 3.239 19 H -0.196 1.196 20 H -0.207 1.207 21 H -0.196 1.196 22 H 0.098 0.902 23 H 0.083 0.917 24 H 0.102 0.898 25 H 0.159 0.841 26 H 0.160 0.840 27 H 0.050 0.950 28 H 0.080 0.920 29 H 0.106 0.894 30 H 0.081 0.919 Dipole moment (debyes) X Y Z Total from point charges 6.440 12.918 1.721 14.537 hybrid contribution -0.526 -0.846 -0.304 1.041 sum 5.914 12.073 1.418 13.518 Atomic orbital electron populations 1.20716 0.89047 1.03504 1.03253 1.19890 0.97637 0.89920 1.00897 1.16991 0.88049 0.81484 1.03770 1.91504 1.79995 1.45270 1.93714 1.21831 0.92488 0.93325 1.13394 1.96670 1.74679 1.26683 1.97834 1.20844 1.00251 0.89764 0.98665 1.21427 0.93197 0.98275 0.99034 1.20223 0.93570 0.94404 0.96154 1.17516 0.87547 0.83897 0.86182 1.90647 1.39548 1.78814 1.38204 1.43694 1.31027 1.15997 1.23238 1.22161 0.91561 0.97004 0.93824 1.19839 1.21216 0.96552 1.05153 0.87360 1.25437 0.97150 0.99642 0.95092 1.70134 1.31600 1.38062 1.11702 0.85844 0.80222 0.79984 0.77829 1.19605 1.20721 1.19609 0.90244 0.91657 0.89791 0.84081 0.84004 0.94958 0.91975 0.89429 0.91891 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -1.87 9.05 36.01 0.33 -1.55 16 2 C -0.08 -1.45 5.92 -104.14 -0.62 -2.07 16 3 C 0.12 1.93 7.20 -39.46 -0.28 1.65 16 4 F -0.13 -2.00 15.98 2.25 0.04 -1.96 16 5 C -0.13 -1.92 6.24 -39.33 -0.25 -2.16 16 6 Br -0.04 -0.55 33.26 -68.01 -2.26 -2.82 16 7 C -0.08 -1.05 9.76 -39.63 -0.39 -1.43 16 8 C -0.10 -1.61 7.44 -39.17 -0.29 -1.90 16 9 C -0.04 -0.76 4.79 -104.97 -0.50 -1.26 16 10 C 0.46 10.90 5.94 -12.40 -0.07 10.82 16 11 O -0.59 -15.66 15.77 5.28 0.08 -15.58 16 12 N -0.42 -10.41 3.02 -123.33 -0.37 -10.78 16 13 C 0.10 2.11 8.18 59.85 0.49 2.60 16 14 C -0.30 -7.93 9.54 -15.00 -0.14 -8.07 16 15 H 0.11 2.99 7.19 -52.49 -0.38 2.61 16 16 C 0.03 0.75 5.45 -17.45 -0.10 0.66 16 17 N -0.88 -21.64 9.49 55.50 0.53 -21.12 16 18 Si 0.94 19.69 29.56 -169.99 -5.02 14.66 16 19 H -0.27 -5.73 7.11 56.52 0.40 -5.33 16 20 H -0.28 -5.79 7.11 56.52 0.40 -5.39 16 21 H -0.27 -5.68 7.11 56.52 0.40 -5.28 16 22 H 0.08 1.33 8.14 -51.93 -0.42 0.90 16 23 H 0.06 0.97 7.74 -51.93 -0.40 0.57 16 24 H 0.08 1.63 6.75 -51.93 -0.35 1.28 16 25 H 0.14 1.54 8.06 -52.49 -0.42 1.12 16 26 H 0.14 2.16 7.55 -52.48 -0.40 1.76 16 27 H 0.03 0.60 4.61 -51.93 -0.24 0.36 16 28 H 0.06 1.38 7.55 -51.93 -0.39 0.98 16 29 H 0.09 2.04 6.49 -51.93 -0.34 1.70 16 30 H 0.27 6.35 8.31 -40.82 -0.34 6.01 16 LS Contribution 280.30 15.07 4.22 4.22 Total: -1.00 -27.70 280.30 -7.09 -34.78 By element: Atomic # 1 Polarization: 3.77 SS G_CDS: -2.47 Total: 1.29 kcal Atomic # 6 Polarization: -0.89 SS G_CDS: -1.82 Total: -2.71 kcal Atomic # 7 Polarization: -32.05 SS G_CDS: 0.15 Total: -31.90 kcal Atomic # 8 Polarization: -15.66 SS G_CDS: 0.08 Total: -15.58 kcal Atomic # 9 Polarization: -2.00 SS G_CDS: 0.04 Total: -1.96 kcal Atomic # 14 Polarization: 19.69 SS G_CDS: -5.02 Total: 14.66 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -2.26 Total: -2.82 kcal Total LS contribution 4.22 Total: 4.22 kcal Total: -27.70 -7.09 -34.78 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000597012262.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.345 kcal (2) G-P(sol) polarization free energy of solvation -27.695 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.040 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.088 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.784 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.30 seconds