Wall clock time and date at job start Tue Mar 31 2020 11:17:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13605 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 N 1.46491 * 109.47411 * 31.20277 * 3 2 1 5 5 C 1.36809 * 120.00037 * 262.46773 * 4 3 2 6 6 H 1.08001 * 120.00268 * 206.28851 * 5 4 3 7 7 C 1.39088 * 119.99931 * 26.28729 * 5 4 3 8 8 N 1.31342 * 120.00120 * 25.70041 * 7 5 4 9 9 Si 1.86802 * 119.99833 * 205.70447 * 7 5 4 10 10 H 1.48499 * 109.47087 * 359.97438 * 9 7 5 11 11 H 1.48502 * 109.47055 * 119.99904 * 9 7 5 12 12 H 1.48501 * 109.46845 * 239.99654 * 9 7 5 13 13 C 1.34774 * 120.00123 * 82.47074 * 4 3 2 14 14 O 1.21608 * 119.99977 * 181.50488 * 13 4 3 15 15 C 1.47771 * 120.00095 * 1.49848 * 13 4 3 16 16 C 1.38497 * 119.28277 * 172.31372 * 15 13 4 17 17 C 1.40548 * 118.53066 * 180.02562 * 16 15 13 18 18 C 1.40291 * 122.08476 * 179.97438 * 17 16 15 19 19 C 1.36278 * 119.48180 * 180.02562 * 18 17 16 20 20 C 1.39300 * 120.96838 * 359.97438 * 19 18 17 21 21 C 1.36308 * 121.09223 * 0.02562 * 20 19 18 22 22 C 1.40190 * 119.57882 * 0.26956 * 21 20 19 23 23 C 1.40877 * 121.85257 * 180.27455 * 22 21 20 24 24 Cl 1.73595 * 119.89553 * 359.43055 * 23 22 21 25 25 N 1.30989 * 120.20975 * 179.72748 * 23 22 21 26 26 H 1.09002 * 109.46839 * 271.19745 * 3 2 1 27 27 H 1.08997 * 109.47089 * 151.20312 * 3 2 1 28 28 H 0.96990 * 120.00176 * 180.02562 * 8 7 5 29 29 H 1.08002 * 120.73691 * 0.04091 * 16 15 13 30 30 H 1.08002 * 120.25896 * 0.04023 * 18 17 16 31 31 H 1.07999 * 119.51740 * 179.97438 * 19 18 17 32 32 H 1.08000 * 119.45215 * 180.02562 * 20 19 18 33 33 H 1.07998 * 120.21132 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0969 -1.1804 -0.7155 5 6 3.4719 -2.2961 -0.0181 6 1 4.1975 -2.9770 -0.4381 7 6 2.9187 -2.5535 1.2318 8 7 1.7341 -2.0752 1.5368 9 14 3.8606 -3.5794 2.4767 10 1 5.1605 -3.9965 1.8922 11 1 4.1032 -2.7734 3.7001 12 1 3.0666 -4.7844 2.8272 13 6 3.1774 -1.1680 -2.0608 14 8 3.5573 -2.1578 -2.6564 15 6 2.8039 0.0484 -2.8121 16 6 3.0423 0.1026 -4.1753 17 6 2.6814 1.2673 -4.8742 18 6 2.8893 1.4025 -6.2550 19 6 2.5194 2.5560 -6.8792 20 6 1.9376 3.6019 -6.1665 21 6 1.7210 3.5043 -4.8243 22 6 2.0941 2.3354 -4.1463 23 6 1.8875 2.1810 -2.7614 24 17 1.1654 3.4670 -1.8457 25 7 2.2438 1.0725 -2.1613 26 1 2.9713 -0.0207 1.0275 27 1 2.9710 0.9014 -0.4950 28 1 1.3485 -2.2544 2.4085 29 1 3.4954 -0.7318 -4.6900 30 1 3.3389 0.5985 -6.8189 31 1 2.6796 2.6608 -7.9421 32 1 1.6533 4.5051 -6.6860 33 1 1.2693 4.3242 -4.2857 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037372972.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:17:14 Heat of formation + Delta-G solvation = 70.610457 kcal Electronic energy + Delta-G solvation = -23087.798227 eV Core-core repulsion = 19526.754516 eV Total energy + Delta-G solvation = -3561.043710 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 315.052 amu Computer time = 0.24 seconds Orbital eigenvalues (eV) -40.87429 -38.85394 -37.17126 -36.46675 -35.69805 -34.20213 -32.71707 -32.15448 -31.15941 -29.60204 -27.36618 -25.68115 -24.11655 -23.67040 -22.21175 -20.39201 -17.97759 -17.82321 -17.69170 -16.68569 -16.29251 -15.70877 -15.22168 -14.91135 -14.68593 -14.34986 -14.16090 -13.80538 -13.48864 -13.30819 -12.95978 -12.63387 -12.48813 -12.06629 -11.92064 -11.52353 -11.41092 -11.39254 -11.18333 -11.17978 -11.06657 -10.54256 -10.47216 -10.39251 -9.97653 -9.45921 -9.25013 -9.15374 -8.63136 -8.10957 -7.94312 -6.64656 -4.08573 0.20743 0.70054 1.77352 1.81116 2.66778 3.08036 3.16939 3.23499 3.63795 3.80441 4.07447 4.19593 4.31909 4.39900 4.50132 4.64177 4.70541 4.84888 4.89815 5.03662 5.10542 5.27867 5.45827 5.57118 5.69297 5.76655 5.85017 5.93409 6.25970 6.30607 6.40013 6.43868 6.62069 6.72140 7.32870 7.69356 7.88388 8.18865 8.87328 9.01914 9.06148 9.66603 10.38429 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.020698 B = 0.004619 C = 0.003929 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1352.475266 B = 6061.061882 C = 7124.830165 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.477 5.477 2 C 0.265 3.735 3 C 0.216 3.784 4 N -0.402 5.402 5 C -0.315 4.315 6 H 0.112 0.888 7 C 0.039 3.961 8 N -0.839 5.839 9 Si 0.926 3.074 10 H -0.263 1.263 11 H -0.276 1.276 12 H -0.280 1.280 13 C 0.482 3.518 14 O -0.573 6.573 15 C 0.103 3.897 16 C -0.105 4.105 17 C -0.016 4.016 18 C -0.104 4.104 19 C -0.100 4.100 20 C -0.121 4.121 21 C -0.085 4.085 22 C -0.097 4.097 23 C 0.210 3.790 24 Cl -0.025 7.025 25 N -0.456 5.456 26 H 0.102 0.898 27 H 0.119 0.881 28 H 0.277 0.723 29 H 0.156 0.844 30 H 0.136 0.864 31 H 0.127 0.873 32 H 0.127 0.873 33 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.258 13.077 -10.605 17.149 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.158 5.158 2 C -0.053 4.053 3 C 0.089 3.911 4 N -0.118 5.118 5 C -0.442 4.442 6 H 0.130 0.870 7 C -0.170 4.170 8 N -0.474 5.474 9 Si 0.751 3.249 10 H -0.187 1.187 11 H -0.201 1.201 12 H -0.206 1.206 13 C 0.271 3.729 14 O -0.457 6.457 15 C -0.022 4.022 16 C -0.126 4.126 17 C -0.021 4.021 18 C -0.123 4.123 19 C -0.119 4.119 20 C -0.139 4.139 21 C -0.104 4.104 22 C -0.100 4.100 23 C 0.030 3.970 24 Cl 0.004 6.996 25 N -0.169 5.169 26 H 0.120 0.880 27 H 0.136 0.864 28 H 0.088 0.912 29 H 0.174 0.826 30 H 0.154 0.846 31 H 0.145 0.855 32 H 0.145 0.855 33 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 1.504 12.416 -9.689 15.821 hybrid contribution 0.560 -0.276 0.099 0.632 sum 2.064 12.141 -9.590 15.609 Atomic orbital electron populations 1.80823 1.13539 1.10568 1.10822 1.28727 0.94857 0.90814 0.90926 1.19125 0.82569 0.90073 0.99373 1.43542 1.52139 1.12418 1.03658 1.19824 1.22487 1.02884 0.99052 0.87046 1.25518 0.94445 0.97738 0.99270 1.69952 1.11956 1.42978 1.22479 0.85882 0.80124 0.79185 0.79708 1.18664 1.20130 1.20560 1.17455 0.86968 0.86099 0.82354 1.90655 1.53288 1.34126 1.67631 1.21364 0.96505 0.92221 0.92139 1.22169 0.98833 0.97545 0.94098 1.18075 0.96939 0.92877 0.94202 1.21012 1.00173 0.98580 0.92491 1.20984 0.97449 0.93241 1.00239 1.20904 0.99652 0.99208 0.94158 1.21048 0.98187 0.96355 0.94836 1.18515 1.02878 0.96336 0.92283 1.21954 0.96265 0.90896 0.87864 1.98396 1.80648 1.45794 1.74763 1.67400 1.10747 0.99558 1.39181 0.88020 0.86432 0.91195 0.82639 0.84598 0.85464 0.85511 0.84745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.48 -12.13 18.54 42.16 0.78 -11.35 16 2 C 0.26 6.33 11.76 -20.76 -0.24 6.08 16 3 C 0.22 4.70 4.77 -6.83 -0.03 4.66 16 4 N -0.40 -9.85 2.57 -119.05 -0.31 -10.16 16 5 C -0.32 -8.13 9.08 -15.02 -0.14 -8.27 16 6 H 0.11 2.96 7.58 -52.49 -0.40 2.56 16 7 C 0.04 0.96 4.68 -17.45 -0.08 0.88 16 8 N -0.84 -21.65 10.23 55.50 0.57 -21.08 16 9 Si 0.93 19.04 29.62 -169.99 -5.04 14.00 16 10 H -0.26 -5.34 7.11 56.52 0.40 -4.94 16 11 H -0.28 -5.51 7.11 56.52 0.40 -5.11 16 12 H -0.28 -5.88 7.11 56.52 0.40 -5.48 16 13 C 0.48 11.63 7.51 -12.36 -0.09 11.54 16 14 O -0.57 -15.20 16.04 5.27 0.08 -15.11 16 15 C 0.10 2.09 6.59 -83.09 -0.55 1.54 16 16 C -0.10 -1.78 9.41 -38.62 -0.36 -2.14 16 17 C -0.02 -0.23 5.74 -106.83 -0.61 -0.84 16 18 C -0.10 -1.15 9.81 -39.52 -0.39 -1.54 16 19 C -0.10 -0.91 9.95 -39.89 -0.40 -1.31 16 20 C -0.12 -1.12 9.95 -39.88 -0.40 -1.51 16 21 C -0.08 -0.95 9.45 -39.54 -0.37 -1.33 16 22 C -0.10 -1.39 5.75 -106.74 -0.61 -2.01 16 23 C 0.21 3.43 7.35 -16.91 -0.12 3.31 16 24 Cl -0.02 -0.35 27.72 -51.86 -1.44 -1.79 16 25 N -0.46 -8.67 4.70 -6.65 -0.03 -8.70 16 26 H 0.10 2.16 7.07 -51.93 -0.37 1.79 16 27 H 0.12 2.28 5.41 -51.93 -0.28 2.00 16 28 H 0.28 6.82 8.31 -40.82 -0.34 6.48 16 29 H 0.16 2.51 7.62 -52.49 -0.40 2.11 16 30 H 0.14 1.21 8.06 -52.49 -0.42 0.78 16 31 H 0.13 0.79 8.06 -52.49 -0.42 0.36 16 32 H 0.13 0.81 8.06 -52.49 -0.42 0.38 16 33 H 0.13 1.30 7.03 -52.49 -0.37 0.94 16 LS Contribution 309.74 15.07 4.67 4.67 Total: -1.00 -31.23 309.74 -7.33 -38.57 By element: Atomic # 1 Polarization: 4.10 SS G_CDS: -2.22 Total: 1.89 kcal Atomic # 6 Polarization: 13.47 SS G_CDS: -4.41 Total: 9.07 kcal Atomic # 7 Polarization: -52.30 SS G_CDS: 1.01 Total: -51.29 kcal Atomic # 8 Polarization: -15.20 SS G_CDS: 0.08 Total: -15.11 kcal Atomic # 14 Polarization: 19.04 SS G_CDS: -5.04 Total: 14.00 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -1.44 Total: -1.79 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -31.23 -7.33 -38.57 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037372972.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 109.177 kcal (2) G-P(sol) polarization free energy of solvation -31.234 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.567 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.24 seconds