Wall clock time and date at job start Tue Mar 31 2020 11:15:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34229 * 117.00076 * 2 1 4 4 O 1.20824 * 119.99771 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00330 * 180.02562 * 3 2 1 6 6 N 1.46496 * 109.46971 * 180.02562 * 5 3 2 7 7 C 1.36884 * 119.99901 * 281.57070 * 6 5 3 8 8 H 1.07993 * 120.00370 * 316.46520 * 7 6 5 9 9 C 1.39042 * 119.99664 * 136.45588 * 7 6 5 10 10 N 1.31366 * 120.00331 * 337.45861 * 9 7 6 11 11 Si 1.86805 * 119.99630 * 157.45064 * 9 7 6 12 12 H 1.48498 * 109.47066 * 90.00739 * 11 9 7 13 13 H 1.48507 * 109.46810 * 210.00539 * 11 9 7 14 14 H 1.48502 * 109.47173 * 330.00081 * 11 9 7 15 15 C 1.34770 * 120.00133 * 101.58170 * 6 5 3 16 16 O 1.21606 * 120.00075 * 187.19072 * 15 6 5 17 17 C 1.47659 * 120.00183 * 6.91037 * 15 6 5 18 18 C 1.39710 * 120.14667 * 321.26069 * 17 15 6 19 19 C 1.37882 * 119.90691 * 179.72036 * 18 17 15 20 20 C 1.38411 * 120.21132 * 0.57265 * 19 18 17 21 21 C 1.38485 * 120.30583 * 359.68414 * 20 19 18 22 22 F 1.35101 * 119.95754 * 180.02562 * 21 20 19 23 23 C 1.38357 * 120.08499 * 0.03722 * 21 20 19 24 24 Cl 1.73606 * 120.10343 * 180.02562 * 23 21 20 25 25 H 1.09004 * 109.46907 * 299.99225 * 1 2 3 26 26 H 1.08990 * 109.47388 * 59.99502 * 1 2 3 27 27 H 1.09005 * 109.46586 * 179.97438 * 1 2 3 28 28 H 1.09005 * 109.46884 * 60.00004 * 5 3 2 29 29 H 1.08996 * 109.46746 * 300.00668 * 5 3 2 30 30 H 0.96993 * 120.00158 * 185.05047 * 10 9 7 31 31 H 1.08002 * 120.04759 * 359.97438 * 18 17 15 32 32 H 1.07996 * 119.89075 * 180.27316 * 19 18 17 33 33 H 1.08005 * 119.84555 * 179.69479 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5664 1.2749 -0.0006 6 7 3.9816 2.6798 0.0002 7 6 3.9471 3.4043 -1.1607 8 1 4.3069 2.9677 -2.0806 9 6 3.4487 4.7023 -1.1555 10 7 2.6267 5.0865 -0.2056 11 14 3.9482 5.8999 -2.4993 12 1 2.9909 5.8021 -3.6304 13 1 3.9364 7.2831 -1.9590 14 1 5.3143 5.5666 -2.9767 15 6 4.3978 3.2589 1.1437 16 8 4.6175 4.4545 1.1749 17 6 4.5812 2.4426 2.3604 18 6 3.6813 1.4166 2.6593 19 6 3.8605 0.6537 3.7937 20 6 4.9226 0.9087 4.6439 21 6 5.8169 1.9270 4.3590 22 9 6.8513 2.1694 5.1935 23 6 5.6522 2.6965 3.2211 24 17 6.7733 3.9727 2.8632 25 1 -0.3633 0.5137 0.8901 26 1 -0.3633 0.5139 -0.8898 27 1 -0.3633 -1.0277 -0.0005 28 1 3.9557 0.7810 -0.8909 29 1 3.9564 0.7805 0.8891 30 1 2.2216 5.9671 -0.2415 31 1 2.8487 1.2186 2.0004 32 1 3.1673 -0.1423 4.0221 33 1 5.0545 0.3106 5.5335 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000080391470.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:15:46 Heat of formation + Delta-G solvation = -95.100276 kcal Electronic energy + Delta-G solvation = -24705.736246 eV Core-core repulsion = 20674.444803 eV Total energy + Delta-G solvation = -4031.291443 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 315.051 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -48.81894 -40.21716 -39.15962 -37.47340 -36.08021 -35.75971 -34.17887 -32.28713 -30.62503 -30.27162 -28.50851 -26.37326 -25.22179 -23.04821 -22.54837 -20.85042 -19.79498 -17.84162 -17.05728 -16.81943 -16.62338 -16.27739 -15.87853 -15.66769 -15.62425 -15.05515 -14.63103 -14.29125 -13.97814 -13.56047 -13.21027 -13.08076 -12.82965 -12.57068 -12.24018 -12.00942 -11.68609 -11.54863 -11.36955 -11.23261 -10.89881 -10.82872 -10.73815 -10.43131 -10.27823 -10.22506 -9.71788 -8.85703 -8.74591 -8.49794 -8.25621 -7.30337 -6.13138 -3.90638 1.01153 1.12084 2.44470 2.91991 3.08100 3.29110 3.39504 3.41428 3.47020 4.03385 4.25390 4.44194 4.64623 4.88756 4.99477 5.20359 5.23326 5.32797 5.38860 5.44519 5.50600 5.61169 5.68220 5.81708 5.94041 5.97983 6.04124 6.24406 6.36539 6.77561 6.93545 7.54058 8.11256 8.50877 8.84809 8.97228 9.47454 10.03360 10.91536 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.011516 B = 0.007292 C = 0.004730 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2430.845677 B = 3839.067137 C = 5918.478906 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.378 6.378 3 C 0.416 3.584 4 O -0.444 6.444 5 C 0.092 3.908 6 N -0.417 5.417 7 C -0.360 4.360 8 H 0.085 0.915 9 C 0.082 3.918 10 N -0.788 5.788 11 Si 0.910 3.090 12 H -0.283 1.283 13 H -0.283 1.283 14 H -0.269 1.269 15 C 0.505 3.495 16 O -0.491 6.491 17 C -0.061 4.061 18 C -0.115 4.115 19 C -0.092 4.092 20 C -0.147 4.147 21 C 0.101 3.899 22 F -0.131 7.131 23 C -0.043 4.043 24 Cl -0.027 7.027 25 H 0.056 0.944 26 H 0.057 0.943 27 H 0.091 0.909 28 H 0.101 0.899 29 H 0.111 0.889 30 H 0.265 0.735 31 H 0.138 0.862 32 H 0.139 0.861 33 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.519 -12.391 6.031 13.791 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.296 6.296 3 C 0.254 3.746 4 O -0.324 6.324 5 C -0.034 4.034 6 N -0.139 5.139 7 C -0.486 4.486 8 H 0.103 0.897 9 C -0.133 4.133 10 N -0.418 5.418 11 Si 0.736 3.264 12 H -0.209 1.209 13 H -0.208 1.208 14 H -0.193 1.193 15 C 0.292 3.708 16 O -0.366 6.366 17 C -0.066 4.066 18 C -0.134 4.134 19 C -0.110 4.110 20 C -0.166 4.166 21 C 0.080 3.920 22 F -0.109 7.109 23 C -0.072 4.072 24 Cl 0.002 6.998 25 H 0.075 0.925 26 H 0.076 0.924 27 H 0.110 0.890 28 H 0.119 0.881 29 H 0.128 0.872 30 H 0.075 0.925 31 H 0.155 0.845 32 H 0.157 0.843 33 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 0.466 -11.069 6.149 12.671 hybrid contribution -0.102 0.697 -0.480 0.852 sum 0.364 -10.372 5.669 11.826 Atomic orbital electron populations 1.23079 0.77986 1.02485 1.02219 1.86542 1.22304 1.35210 1.85532 1.25078 0.93320 0.81489 0.74724 1.90842 1.65856 1.35314 1.40414 1.21817 0.86545 0.89960 1.05087 1.42909 1.55053 1.07244 1.08689 1.18946 1.45717 0.96712 0.87200 0.89690 1.25260 0.93205 0.98459 0.96396 1.69919 1.21279 1.19206 1.31361 0.86258 0.79233 0.80417 0.80450 1.20890 1.20850 1.19345 1.17511 0.83426 0.87616 0.82261 1.90710 1.50642 1.13155 1.82112 1.20449 0.93215 0.96130 0.96828 1.21683 0.99229 0.94783 0.97725 1.20989 0.97018 0.99597 0.93379 1.21076 0.95568 0.98084 1.01872 1.17283 0.88052 0.97559 0.89061 1.91511 1.55861 1.93785 1.69792 1.20934 0.95794 0.94722 0.95732 1.98401 1.58834 1.48230 1.94322 0.92509 0.92387 0.89007 0.88108 0.87184 0.92510 0.84478 0.84318 0.84076 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.47 10.56 101.05 1.07 1.54 16 2 O -0.38 -5.97 10.57 -39.26 -0.41 -6.38 16 3 C 0.42 8.15 6.05 36.01 0.22 8.37 16 4 O -0.44 -10.76 15.85 -18.75 -0.30 -11.06 16 5 C 0.09 1.73 5.47 -5.19 -0.03 1.71 16 6 N -0.42 -10.13 2.13 -117.24 -0.25 -10.38 16 7 C -0.36 -9.60 8.78 -15.00 -0.13 -9.73 16 8 H 0.09 2.15 7.93 -52.49 -0.42 1.73 16 9 C 0.08 2.29 4.24 -17.45 -0.07 2.22 16 10 N -0.79 -23.28 11.76 55.50 0.65 -22.63 16 11 Si 0.91 21.76 29.61 -169.99 -5.03 16.73 16 12 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 13 H -0.28 -6.90 7.11 56.52 0.40 -6.50 16 14 H -0.27 -6.31 7.11 56.52 0.40 -5.90 16 15 C 0.50 12.61 6.52 -12.42 -0.08 12.53 16 16 O -0.49 -14.08 12.72 5.27 0.07 -14.02 16 17 C -0.06 -1.24 5.37 -104.95 -0.56 -1.81 16 18 C -0.12 -1.91 7.35 -39.16 -0.29 -2.20 16 19 C -0.09 -1.16 10.03 -39.65 -0.40 -1.56 16 20 C -0.15 -1.86 10.02 -39.43 -0.39 -2.25 16 21 C 0.10 1.59 7.27 -39.45 -0.29 1.31 16 22 F -0.13 -2.03 16.83 2.25 0.04 -1.99 16 23 C -0.04 -0.81 6.34 -38.99 -0.25 -1.06 16 24 Cl -0.03 -0.55 26.45 -51.86 -1.37 -1.92 16 25 H 0.06 0.74 8.13 -51.93 -0.42 0.31 16 26 H 0.06 0.79 8.13 -51.93 -0.42 0.36 16 27 H 0.09 0.83 8.14 -51.93 -0.42 0.41 16 28 H 0.10 1.67 8.13 -51.93 -0.42 1.25 16 29 H 0.11 1.77 4.29 -51.93 -0.22 1.55 16 30 H 0.26 7.55 8.31 -40.82 -0.34 7.21 16 31 H 0.14 2.33 4.18 -52.49 -0.22 2.11 16 32 H 0.14 1.25 8.06 -52.49 -0.42 0.83 16 33 H 0.14 1.31 8.06 -52.48 -0.42 0.89 16 LS Contribution 308.59 15.07 4.65 4.65 Total: -1.00 -34.13 308.59 -5.70 -39.83 By element: Atomic # 1 Polarization: 0.64 SS G_CDS: -2.53 Total: -1.88 kcal Atomic # 6 Polarization: 10.27 SS G_CDS: -1.21 Total: 9.06 kcal Atomic # 7 Polarization: -33.41 SS G_CDS: 0.40 Total: -33.01 kcal Atomic # 8 Polarization: -30.82 SS G_CDS: -0.64 Total: -31.46 kcal Atomic # 9 Polarization: -2.03 SS G_CDS: 0.04 Total: -1.99 kcal Atomic # 14 Polarization: 21.76 SS G_CDS: -5.03 Total: 16.73 kcal Atomic # 17 Polarization: -0.55 SS G_CDS: -1.37 Total: -1.92 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -34.13 -5.70 -39.83 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000080391470.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.273 kcal (2) G-P(sol) polarization free energy of solvation -34.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.696 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.827 kcal (6) G-S(sol) free energy of system = (1) + (5) -95.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds