Wall clock time and date at job start Tue Mar 31 2020 11:15:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34232 * 117.00202 * 2 1 4 4 O 1.20829 * 119.99589 * 0.02562 * 3 2 1 5 5 C 1.50695 * 119.99939 * 179.97438 * 3 2 1 6 6 N 1.46501 * 109.46808 * 179.97438 * 5 3 2 7 7 C 1.36900 * 120.00289 * 79.35082 * 6 5 3 8 8 H 1.07999 * 119.99864 * 312.41755 * 7 6 5 9 9 C 1.39029 * 119.99833 * 132.68799 * 7 6 5 10 10 N 1.31376 * 120.00209 * 352.96267 * 9 7 6 11 11 Si 1.86803 * 119.99750 * 172.96352 * 9 7 6 12 12 H 1.48500 * 109.47141 * 0.02562 * 11 9 7 13 13 H 1.48498 * 109.47040 * 119.99975 * 11 9 7 14 14 H 1.48502 * 109.46887 * 240.00009 * 11 9 7 15 15 C 1.34780 * 119.99954 * 259.34962 * 6 5 3 16 16 O 1.21614 * 120.00029 * 172.46958 * 15 6 5 17 17 C 1.47538 * 120.00040 * 352.47300 * 15 6 5 18 18 C 1.39757 * 120.13442 * 30.44033 * 17 15 6 19 19 C 1.37770 * 119.88810 * 179.71964 * 18 17 15 20 20 C 1.38733 * 120.15652 * 0.55805 * 19 18 17 21 21 F 1.35102 * 119.86455 * 179.74224 * 20 19 18 22 22 C 1.38587 * 120.27571 * 359.72091 * 20 19 18 23 23 C 1.38014 * 120.10938 * 359.97438 * 22 20 19 24 24 Cl 1.73603 * 120.07860 * 179.97438 * 23 22 20 25 25 H 1.08996 * 109.47392 * 59.99831 * 1 2 3 26 26 H 1.08994 * 109.47506 * 180.02562 * 1 2 3 27 27 H 1.09011 * 109.47416 * 300.00209 * 1 2 3 28 28 H 1.08993 * 109.47303 * 59.99865 * 5 3 2 29 29 H 1.08998 * 109.47495 * 299.99309 * 5 3 2 30 30 H 0.96998 * 119.99994 * 185.01785 * 10 9 7 31 31 H 1.08004 * 120.06252 * 359.97438 * 18 17 15 32 32 H 1.07998 * 119.92447 * 180.25659 * 19 18 17 33 33 H 1.07993 * 119.94063 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 7 3.9817 2.6797 -0.0002 7 6 3.9652 3.3990 1.1645 8 1 3.0970 3.3679 1.8062 9 6 5.0638 4.1741 1.5184 10 7 6.1685 4.1099 0.8103 11 14 4.9690 5.3067 3.0009 12 1 3.6257 5.1952 3.6240 13 1 6.0065 4.9163 3.9891 14 1 5.1999 6.7084 2.5684 15 6 4.3801 3.2640 -1.1475 16 8 4.5934 4.4609 -1.1782 17 6 4.5574 2.4516 -2.3663 18 6 3.7736 1.3127 -2.5705 19 6 3.9394 0.5611 -3.7131 20 6 4.8901 0.9257 -4.6553 21 9 5.0513 0.1814 -5.7712 22 6 5.6750 2.0505 -4.4569 23 6 5.5140 2.8151 -3.3192 24 17 6.4980 4.2237 -3.0711 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3634 0.5139 0.8900 28 1 3.9564 0.7805 -0.8891 29 1 3.9557 0.7810 0.8908 30 1 6.9580 4.5942 1.0984 31 1 3.0363 1.0245 -1.8357 32 1 3.3311 -0.3168 -3.8734 33 1 6.4131 2.3296 -5.1940 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000120534874.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:15:49 Heat of formation + Delta-G solvation = -88.155253 kcal Electronic energy + Delta-G solvation = -24537.127978 eV Core-core repulsion = 20506.137694 eV Total energy + Delta-G solvation = -4030.990284 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 315.051 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.89250 -40.46427 -39.27452 -37.44264 -36.07183 -35.86892 -34.28392 -32.37802 -30.81829 -30.14011 -28.68070 -26.53030 -25.06769 -22.98584 -22.74311 -20.96767 -19.86250 -17.75543 -17.44810 -17.18511 -16.70092 -16.26299 -16.11894 -15.66908 -15.54498 -14.92642 -14.47332 -14.32426 -13.88531 -13.71276 -13.48168 -13.25460 -12.88782 -12.86550 -12.35665 -12.01898 -11.77215 -11.61087 -11.33894 -11.04285 -11.00907 -10.69198 -10.54744 -10.48903 -10.34263 -10.18912 -10.08348 -8.88625 -8.79996 -8.37634 -8.20193 -7.33542 -6.20912 -4.01620 0.98476 1.16209 2.54069 2.62038 2.93998 3.24875 3.35407 3.37371 3.42400 4.08939 4.29003 4.52096 4.69673 4.78705 4.94255 5.06085 5.22589 5.26038 5.30872 5.37754 5.41506 5.53780 5.59722 5.67823 5.91790 5.98817 6.07304 6.18759 6.32646 6.67950 6.78386 7.56360 8.09146 8.24795 8.87364 8.98404 9.43512 10.06582 10.87225 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.010676 B = 0.007311 C = 0.004557 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2622.120587 B = 3829.112855 C = 6142.979904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.369 6.369 3 C 0.429 3.571 4 O -0.481 6.481 5 C 0.078 3.922 6 N -0.427 5.427 7 C -0.333 4.333 8 H 0.081 0.919 9 C 0.064 3.936 10 N -0.827 5.827 11 Si 0.920 3.080 12 H -0.270 1.270 13 H -0.283 1.283 14 H -0.280 1.280 15 C 0.522 3.478 16 O -0.493 6.493 17 C -0.101 4.101 18 C -0.094 4.094 19 C -0.155 4.155 20 C 0.108 3.892 21 F -0.138 7.138 22 C -0.156 4.156 23 C 0.031 3.969 24 Cl -0.018 7.018 25 H 0.059 0.941 26 H 0.096 0.904 27 H 0.059 0.941 28 H 0.127 0.873 29 H 0.111 0.889 30 H 0.267 0.733 31 H 0.153 0.847 32 H 0.142 0.858 33 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.531 -10.394 -6.678 12.849 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.286 6.286 3 C 0.269 3.731 4 O -0.365 6.365 5 C -0.049 4.049 6 N -0.149 5.149 7 C -0.459 4.459 8 H 0.099 0.901 9 C -0.146 4.146 10 N -0.460 5.460 11 Si 0.747 3.253 12 H -0.195 1.195 13 H -0.209 1.209 14 H -0.206 1.206 15 C 0.309 3.691 16 O -0.368 6.368 17 C -0.105 4.105 18 C -0.112 4.112 19 C -0.174 4.174 20 C 0.088 3.912 21 F -0.116 7.116 22 C -0.176 4.176 23 C 0.002 3.998 24 Cl 0.012 6.988 25 H 0.077 0.923 26 H 0.114 0.886 27 H 0.078 0.922 28 H 0.143 0.857 29 H 0.129 0.871 30 H 0.077 0.923 31 H 0.170 0.830 32 H 0.159 0.841 33 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -3.370 -9.163 -6.744 11.866 hybrid contribution -0.111 0.402 0.545 0.686 sum -3.481 -8.762 -6.199 11.283 Atomic orbital electron populations 1.23161 0.77477 1.02983 1.02355 1.86543 1.22687 1.34501 1.84899 1.25243 0.93516 0.81271 0.73111 1.90692 1.66656 1.36171 1.42972 1.22109 0.85815 0.90276 1.06655 1.42774 1.59374 1.05557 1.07244 1.19098 1.01202 1.27227 0.98419 0.90123 1.25390 0.94646 0.97349 0.97254 1.69807 1.01094 1.38936 1.36203 0.86008 0.78140 0.80483 0.80682 1.19488 1.20927 1.20601 1.17518 0.83291 0.87156 0.81097 1.90681 1.49756 1.13842 1.82489 1.20645 0.96108 0.95982 0.97810 1.21850 0.99490 0.93281 0.96584 1.21101 0.99650 1.02539 0.94090 1.17549 0.97966 0.91324 0.84366 1.91493 1.94846 1.75365 1.49922 1.20899 1.02497 0.95478 0.98693 1.20700 0.93970 0.91239 0.93853 1.98429 1.67098 1.36985 1.96293 0.92266 0.88590 0.92189 0.85651 0.87098 0.92318 0.83030 0.84067 0.83747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.39 10.56 101.05 1.07 1.46 16 2 O -0.37 -5.40 10.56 -39.26 -0.41 -5.82 16 3 C 0.43 7.83 6.26 36.00 0.23 8.06 16 4 O -0.48 -10.58 15.88 -18.75 -0.30 -10.88 16 5 C 0.08 1.46 5.47 -5.20 -0.03 1.43 16 6 N -0.43 -10.42 2.12 -117.28 -0.25 -10.67 16 7 C -0.33 -8.93 8.74 -15.00 -0.13 -9.06 16 8 H 0.08 2.19 7.84 -52.49 -0.41 1.78 16 9 C 0.06 1.74 4.75 -17.45 -0.08 1.66 16 10 N -0.83 -23.07 11.48 55.50 0.64 -22.43 16 11 Si 0.92 21.37 29.56 -169.99 -5.03 16.35 16 12 H -0.27 -6.18 7.11 56.52 0.40 -5.78 16 13 H -0.28 -6.33 7.11 56.52 0.40 -5.93 16 14 H -0.28 -6.71 7.11 56.52 0.40 -6.31 16 15 C 0.52 13.08 6.29 -12.47 -0.08 13.00 16 16 O -0.49 -14.10 12.90 5.26 0.07 -14.04 16 17 C -0.10 -2.05 5.60 -104.94 -0.59 -2.64 16 18 C -0.09 -1.53 7.50 -39.18 -0.29 -1.83 16 19 C -0.15 -2.11 10.01 -39.57 -0.40 -2.51 16 20 C 0.11 1.53 7.31 -39.27 -0.29 1.25 16 21 F -0.14 -1.84 17.26 2.25 0.04 -1.80 16 22 C -0.16 -2.39 9.79 -39.53 -0.39 -2.78 16 23 C 0.03 0.58 6.34 -39.07 -0.25 0.33 16 24 Cl -0.02 -0.36 26.52 -51.86 -1.38 -1.74 16 25 H 0.06 0.67 8.13 -51.93 -0.42 0.25 16 26 H 0.10 0.75 8.14 -51.93 -0.42 0.33 16 27 H 0.06 0.71 8.14 -51.92 -0.42 0.29 16 28 H 0.13 2.05 3.76 -55.19 -0.21 1.85 16 29 H 0.11 1.92 8.12 -51.93 -0.42 1.50 16 30 H 0.27 7.14 8.31 -40.82 -0.34 6.80 16 31 H 0.15 2.40 3.35 -52.48 -0.18 2.23 16 32 H 0.14 1.47 8.06 -52.49 -0.42 1.05 16 33 H 0.14 1.87 8.06 -52.49 -0.42 1.44 16 LS Contribution 308.13 15.07 4.64 4.64 Total: -1.00 -32.84 308.13 -5.67 -38.51 By element: Atomic # 1 Polarization: 1.95 SS G_CDS: -2.46 Total: -0.51 kcal Atomic # 6 Polarization: 9.61 SS G_CDS: -1.23 Total: 8.38 kcal Atomic # 7 Polarization: -33.49 SS G_CDS: 0.39 Total: -33.10 kcal Atomic # 8 Polarization: -30.09 SS G_CDS: -0.64 Total: -30.73 kcal Atomic # 9 Polarization: -1.84 SS G_CDS: 0.04 Total: -1.80 kcal Atomic # 14 Polarization: 21.37 SS G_CDS: -5.03 Total: 16.35 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -1.38 Total: -1.74 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -32.84 -5.67 -38.51 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000120534874.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.644 kcal (2) G-P(sol) polarization free energy of solvation -32.844 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -82.488 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.667 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.511 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.155 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds