Wall clock time and date at job start Tue Mar 31 2020 11:15:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34230 * 116.99710 * 2 1 4 4 O 1.20824 * 120.00533 * 0.02562 * 3 2 1 5 5 C 1.50705 * 119.99469 * 180.02562 * 3 2 1 6 6 N 1.46503 * 109.46768 * 180.02562 * 5 3 2 7 7 C 1.36891 * 119.99838 * 264.78992 * 6 5 3 8 8 H 1.08001 * 120.00708 * 138.38655 * 7 6 5 9 9 C 1.39035 * 119.99680 * 318.38170 * 7 6 5 10 10 N 1.31373 * 120.00083 * 161.56109 * 9 7 6 11 11 Si 1.86802 * 120.00189 * 341.56191 * 9 7 6 12 12 H 1.48501 * 109.47028 * 93.49761 * 11 9 7 13 13 H 1.48497 * 109.46984 * 213.49617 * 11 9 7 14 14 H 1.48494 * 109.46769 * 333.49652 * 11 9 7 15 15 C 1.34773 * 120.00253 * 84.78430 * 6 5 3 16 16 O 1.21604 * 120.00213 * 5.15563 * 15 6 5 17 17 C 1.47612 * 119.99857 * 185.14733 * 15 6 5 18 18 C 1.39732 * 120.11775 * 143.24007 * 17 15 6 19 19 C 1.37820 * 119.89580 * 180.02562 * 18 17 15 20 20 C 1.38655 * 120.14124 * 0.02562 * 19 18 17 21 21 F 1.35094 * 119.87524 * 180.28262 * 20 19 18 22 22 C 1.38745 * 120.24084 * 0.02562 * 20 19 18 23 23 Cl 1.73601 * 119.95049 * 179.97438 * 22 20 19 24 24 C 1.37948 * 120.10366 * 359.97438 * 22 20 19 25 25 H 1.08999 * 109.46822 * 179.97438 * 1 2 3 26 26 H 1.08992 * 109.46791 * 300.00067 * 1 2 3 27 27 H 1.09007 * 109.46560 * 59.99827 * 1 2 3 28 28 H 1.08999 * 109.47426 * 60.00565 * 5 3 2 29 29 H 1.08999 * 109.46909 * 299.99674 * 5 3 2 30 30 H 0.96998 * 120.00492 * 179.97438 * 10 9 7 31 31 H 1.08006 * 120.05001 * 359.97438 * 18 17 15 32 32 H 1.08003 * 119.92566 * 180.02562 * 19 18 17 33 33 H 1.07997 * 120.07167 * 179.97438 * 24 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5664 1.2748 -0.0006 6 7 3.9817 2.6798 0.0002 7 6 4.2785 3.3063 -1.1802 8 1 3.9438 4.3185 -1.3535 9 6 5.0110 2.6398 -2.1560 10 7 4.9937 3.0685 -3.3977 11 14 6.0196 1.1346 -1.7016 12 1 5.2114 -0.0902 -1.9297 13 1 7.2418 1.0850 -2.5437 14 1 6.4074 1.2124 -0.2703 15 6 4.0715 3.3553 1.1629 16 8 3.8994 2.7756 2.2178 17 6 4.3790 4.7991 1.1557 18 6 3.7764 5.6489 2.0869 19 6 4.0663 6.9962 2.0757 20 6 4.9540 7.5096 1.1425 21 9 5.2388 8.8302 1.1401 22 6 5.5549 6.6712 0.2146 23 17 6.6647 7.3222 -0.9509 24 6 5.2719 5.3211 0.2167 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3632 0.5138 0.8899 27 1 -0.3633 0.5139 -0.8901 28 1 3.9558 0.7810 -0.8908 29 1 3.9564 0.7806 0.8892 30 1 5.5050 2.6037 -4.0785 31 1 3.0837 5.2507 2.8136 32 1 3.6011 7.6535 2.7955 33 1 5.7396 4.6690 -0.5060 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000160990570.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:15:52 Heat of formation + Delta-G solvation = -121.792428 kcal Electronic energy + Delta-G solvation = -24167.743537 eV Core-core repulsion = 20135.294636 eV Total energy + Delta-G solvation = -4032.448901 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 315.051 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.75745 -40.26356 -39.41307 -37.78600 -36.18338 -35.94796 -35.12983 -32.26517 -31.01373 -30.37883 -28.73181 -26.64586 -25.33428 -23.00383 -22.72499 -21.01188 -19.57811 -18.19843 -17.43692 -17.29924 -16.96580 -16.26377 -16.00189 -15.63096 -15.52963 -15.12866 -15.05199 -14.22778 -13.98999 -13.51977 -13.43344 -13.16904 -13.11937 -12.77955 -12.73200 -12.46425 -12.12925 -11.94340 -11.68748 -11.19208 -11.13021 -11.07477 -10.73269 -10.61265 -10.44491 -10.25569 -10.02326 -9.57439 -9.00946 -8.64047 -8.36124 -8.13245 -6.71039 -4.39117 1.05553 1.43457 2.34615 2.73587 2.83812 2.87118 3.07729 3.10230 3.36846 3.85981 3.95743 4.10679 4.31013 4.69621 4.91484 5.23369 5.29711 5.34901 5.37207 5.43193 5.56405 5.61572 5.70709 5.75182 5.86515 6.12882 6.31206 6.40083 6.71955 6.73706 6.92190 7.01190 7.74294 7.98982 8.26236 8.60678 8.95474 9.26356 10.36534 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.014358 B = 0.005563 C = 0.004451 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1949.634773 B = 5032.071125 C = 6289.601005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.037 3.963 2 O -0.368 6.368 3 C 0.450 3.550 4 O -0.490 6.490 5 C 0.106 3.894 6 N -0.439 5.439 7 C -0.357 4.357 8 H 0.113 0.887 9 C 0.070 3.930 10 N -0.839 5.839 11 Si 0.859 3.141 12 H -0.266 1.266 13 H -0.277 1.277 14 H -0.252 1.252 15 C 0.539 3.461 16 O -0.580 6.580 17 C -0.096 4.096 18 C -0.044 4.044 19 C -0.161 4.161 20 C 0.113 3.887 21 F -0.133 7.133 22 C -0.088 4.088 23 Cl -0.056 7.056 24 C -0.024 4.024 25 H 0.095 0.905 26 H 0.059 0.941 27 H 0.060 0.940 28 H 0.112 0.888 29 H 0.114 0.886 30 H 0.281 0.719 31 H 0.141 0.859 32 H 0.142 0.858 33 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.141 0.388 5.263 5.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 O -0.285 6.285 3 C 0.291 3.709 4 O -0.375 6.375 5 C -0.019 4.019 6 N -0.159 5.159 7 C -0.484 4.484 8 H 0.131 0.869 9 C -0.140 4.140 10 N -0.471 5.471 11 Si 0.684 3.316 12 H -0.193 1.193 13 H -0.203 1.203 14 H -0.176 1.176 15 C 0.330 3.670 16 O -0.464 6.464 17 C -0.100 4.100 18 C -0.064 4.064 19 C -0.180 4.180 20 C 0.093 3.907 21 F -0.112 7.112 22 C -0.116 4.116 23 Cl -0.027 7.027 24 C -0.043 4.043 25 H 0.114 0.886 26 H 0.077 0.923 27 H 0.079 0.921 28 H 0.130 0.870 29 H 0.132 0.868 30 H 0.092 0.908 31 H 0.158 0.842 32 H 0.160 0.840 33 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges -1.287 0.490 5.428 5.600 hybrid contribution 0.265 -0.369 -0.375 0.589 sum -1.022 0.121 5.053 5.157 Atomic orbital electron populations 1.23155 0.77354 1.02940 1.02311 1.86519 1.22799 1.34328 1.84855 1.24647 0.92744 0.81279 0.72278 1.90624 1.66601 1.36252 1.43997 1.21441 0.87042 0.88041 1.05381 1.43199 1.57543 1.08369 1.06813 1.19216 1.35244 1.02202 0.91743 0.86922 1.25403 0.96081 0.97978 0.94572 1.69705 1.36985 1.40263 1.00183 0.87170 0.81055 0.82626 0.80758 1.19271 1.20269 1.17557 1.17982 0.79248 0.86503 0.83315 1.90676 1.54991 1.69629 1.31085 1.19792 0.99148 0.94310 0.96717 1.21108 0.97126 0.91505 0.96626 1.20875 1.00493 0.96318 1.00307 1.17614 0.98446 0.77579 0.97079 1.91494 1.92243 1.31530 1.95887 1.20914 1.00190 0.94427 0.96050 1.98364 1.60756 1.86107 1.57441 1.22087 0.94132 0.92304 0.95735 0.88635 0.92269 0.92142 0.87030 0.86839 0.90849 0.84164 0.83983 0.80236 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.49 10.56 101.05 1.07 1.56 16 2 O -0.37 -6.46 10.57 -39.26 -0.41 -6.87 16 3 C 0.45 9.36 7.99 36.01 0.29 9.65 16 4 O -0.49 -11.46 16.06 -18.75 -0.30 -11.76 16 5 C 0.11 2.20 4.57 -5.19 -0.02 2.18 16 6 N -0.44 -10.02 1.65 -117.25 -0.19 -10.21 16 7 C -0.36 -8.57 6.64 -15.00 -0.10 -8.67 16 8 H 0.11 2.92 6.56 -52.49 -0.34 2.57 16 9 C 0.07 1.67 5.30 -17.45 -0.09 1.58 16 10 N -0.84 -21.18 13.95 55.50 0.77 -20.40 16 11 Si 0.86 17.83 25.04 -169.99 -4.26 13.57 16 12 H -0.27 -5.25 6.66 56.52 0.38 -4.87 16 13 H -0.28 -5.75 7.11 56.52 0.40 -5.35 16 14 H -0.25 -5.20 7.11 56.52 0.40 -4.79 16 15 C 0.54 12.09 7.17 -12.44 -0.09 12.01 16 16 O -0.58 -13.70 16.50 5.27 0.09 -13.61 16 17 C -0.10 -1.92 5.43 -104.97 -0.57 -2.49 16 18 C -0.04 -0.75 9.61 -39.18 -0.38 -1.13 16 19 C -0.16 -2.39 10.01 -39.58 -0.40 -2.79 16 20 C 0.11 1.85 7.28 -39.24 -0.29 1.56 16 21 F -0.13 -2.09 16.82 2.25 0.04 -2.06 16 22 C -0.09 -1.57 6.32 -39.50 -0.25 -1.82 16 23 Cl -0.06 -0.94 28.60 -51.86 -1.48 -2.42 16 24 C -0.02 -0.46 7.53 -39.14 -0.29 -0.76 16 25 H 0.10 0.93 8.14 -51.93 -0.42 0.50 16 26 H 0.06 0.78 8.13 -51.93 -0.42 0.36 16 27 H 0.06 0.82 8.13 -51.92 -0.42 0.40 16 28 H 0.11 2.27 3.76 -51.93 -0.20 2.07 16 29 H 0.11 2.17 7.51 -51.93 -0.39 1.78 16 30 H 0.28 6.60 8.31 -40.82 -0.34 6.26 16 31 H 0.14 2.21 8.02 -52.48 -0.42 1.79 16 32 H 0.14 1.65 8.06 -52.48 -0.42 1.22 16 33 H 0.18 3.75 5.78 -52.49 -0.30 3.45 16 LS Contribution 310.90 15.07 4.69 4.69 Total: -1.00 -28.11 310.90 -4.69 -32.80 By element: Atomic # 1 Polarization: 7.90 SS G_CDS: -2.50 Total: 5.39 kcal Atomic # 6 Polarization: 12.00 SS G_CDS: -1.12 Total: 10.88 kcal Atomic # 7 Polarization: -31.19 SS G_CDS: 0.58 Total: -30.61 kcal Atomic # 8 Polarization: -31.61 SS G_CDS: -0.63 Total: -32.24 kcal Atomic # 9 Polarization: -2.09 SS G_CDS: 0.04 Total: -2.06 kcal Atomic # 14 Polarization: 17.83 SS G_CDS: -4.26 Total: 13.57 kcal Atomic # 17 Polarization: -0.94 SS G_CDS: -1.48 Total: -2.42 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -28.11 -4.69 -32.80 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000160990570.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.989 kcal (2) G-P(sol) polarization free energy of solvation -28.110 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -117.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.693 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.803 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds