Wall clock time and date at job start Tue Mar 31 2020 11:32:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31410 * 1 3 3 Si 1.86795 * 119.99846 * 2 1 4 4 H 1.48500 * 109.47212 * 270.00137 * 3 2 1 5 5 H 1.48498 * 109.47486 * 29.99954 * 3 2 1 6 6 H 1.48494 * 109.47377 * 150.00366 * 3 2 1 7 7 C 1.38952 * 120.00015 * 180.02562 * 2 1 3 8 8 H 1.07995 * 119.99714 * 0.02562 * 7 2 1 9 9 N 1.37098 * 119.99786 * 179.97438 * 7 2 1 10 10 C 1.34774 * 119.99682 * 180.02562 * 9 7 2 11 11 O 1.21284 * 120.00445 * 359.97438 * 10 9 7 12 12 C 1.50701 * 119.99866 * 180.02562 * 10 9 7 13 13 N 1.46497 * 109.47185 * 179.97438 * 12 10 9 14 14 C 1.34782 * 119.99994 * 179.97438 * 13 12 10 15 15 O 1.21586 * 119.99821 * 359.97438 * 14 13 12 16 16 N 1.34775 * 119.99957 * 179.97438 * 14 13 12 17 17 C 1.39998 * 119.99781 * 185.62577 * 16 14 13 18 18 C 1.38868 * 120.06239 * 24.80671 * 17 16 14 19 19 C 1.38126 * 119.99191 * 179.74431 * 18 17 16 20 20 C 1.38269 * 120.11093 * 0.52491 * 19 18 17 21 21 C 1.38480 * 120.12069 * 359.72733 * 20 19 18 22 22 F 1.35099 * 119.99284 * 179.97438 * 21 20 19 23 23 C 1.38435 * 120.00963 * 0.02562 * 21 20 19 24 24 Cl 1.73606 * 120.05830 * 179.97438 * 23 21 20 25 25 H 0.97000 * 120.00510 * 359.97438 * 1 2 3 26 26 H 0.96995 * 119.99930 * 359.97438 * 9 7 2 27 27 H 1.09002 * 109.47722 * 59.99076 * 12 10 9 28 28 H 1.09003 * 109.46660 * 299.99389 * 12 10 9 29 29 H 0.96997 * 120.00016 * 359.97438 * 13 12 10 30 30 H 0.96998 * 119.99772 * 5.35589 * 16 14 13 31 31 H 1.07994 * 120.00566 * 359.96846 * 18 17 16 32 32 H 1.07997 * 119.94685 * 180.22897 * 19 18 17 33 33 H 1.08001 * 119.94372 * 179.74482 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3141 0.0000 0.0000 3 14 2.2480 1.6177 0.0000 4 1 2.4955 2.0464 -1.4001 5 1 1.4455 2.6527 0.7000 6 1 3.5456 1.4402 0.6999 7 6 2.0089 -1.2034 -0.0005 8 1 1.4688 -2.1386 -0.0014 9 7 3.3798 -1.2033 -0.0011 10 6 4.0537 -2.3705 -0.0021 11 8 3.4473 -3.4209 -0.0021 12 6 5.5607 -2.3705 -0.0021 13 7 6.0491 -3.7517 -0.0027 14 6 7.3742 -3.9979 -0.0034 15 8 8.1642 -3.0737 -0.0039 16 7 7.8235 -5.2686 -0.0034 17 6 9.1944 -5.5263 0.1148 18 6 10.0262 -4.5990 0.7286 19 6 11.3777 -4.8570 0.8492 20 6 11.9066 -6.0330 0.3499 21 6 11.0823 -6.9586 -0.2678 22 9 11.6019 -8.1065 -0.7551 23 6 9.7262 -6.7073 -0.3867 24 17 8.6918 -7.8666 -1.1614 25 1 -0.4851 0.8400 0.0004 26 1 3.8648 -0.3633 -0.0014 27 1 5.9241 -1.8573 0.8882 28 1 5.9240 -1.8559 -0.8917 29 1 5.4188 -4.4889 -0.0027 30 1 7.1965 -6.0046 -0.0814 31 1 9.6157 -3.6777 1.1149 32 1 12.0233 -4.1370 1.3299 33 1 12.9645 -6.2301 0.4419 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000352972309.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:32:35 Heat of formation + Delta-G solvation = -77.566447 kcal Electronic energy + Delta-G solvation = -22517.050025 eV Core-core repulsion = 18518.811658 eV Total energy + Delta-G solvation = -3998.238368 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 315.057 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -49.26290 -40.97810 -39.14475 -38.34491 -36.87454 -35.07469 -34.70833 -33.92087 -31.87524 -30.79027 -30.05723 -27.72099 -24.60272 -23.41709 -23.10488 -21.01415 -19.78373 -19.06784 -18.76222 -18.18180 -17.06011 -16.73817 -16.12527 -16.10693 -15.75760 -15.66790 -15.05916 -14.89055 -14.58241 -14.43433 -14.27684 -13.63144 -13.35946 -13.21124 -12.72704 -12.59677 -12.32363 -12.24452 -12.06839 -11.88224 -11.34702 -11.29285 -10.85533 -10.69513 -10.26828 -10.11776 -9.76435 -9.17641 -9.03909 -8.86544 -8.43333 -8.36930 -6.46428 -3.99555 0.62116 0.75882 1.64250 2.25276 2.81242 2.94740 2.99710 3.08585 3.28297 3.48215 3.74124 3.95630 3.98798 4.41812 4.44649 4.48545 4.87591 4.94870 5.08007 5.31218 5.51747 5.62757 5.66144 5.66966 5.70194 5.95861 6.05250 6.35319 6.49792 6.62490 7.37849 7.73887 7.93776 8.27868 8.38880 8.75361 9.22986 9.55315 10.65524 Molecular weight = 315.06amu Principal moments of inertia in cm(-1) A = 0.031114 B = 0.002516 C = 0.002351 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 899.689649 B =11125.763189 C =11905.838904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.872 5.872 2 C 0.046 3.954 3 Si 0.880 3.120 4 H -0.268 1.268 5 H -0.274 1.274 6 H -0.267 1.267 7 C -0.312 4.312 8 H 0.122 0.878 9 N -0.573 5.573 10 C 0.436 3.564 11 O -0.579 6.579 12 C 0.124 3.876 13 N -0.713 5.713 14 C 0.708 3.292 15 O -0.574 6.574 16 N -0.680 5.680 17 C 0.220 3.780 18 C -0.133 4.133 19 C -0.062 4.062 20 C -0.170 4.170 21 C 0.132 3.868 22 F -0.126 7.126 23 C -0.120 4.120 24 Cl -0.046 7.046 25 H 0.276 0.724 26 H 0.375 0.625 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.412 0.588 30 H 0.413 0.587 31 H 0.166 0.834 32 H 0.143 0.857 33 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 22.802 -9.686 1.286 24.808 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.511 5.511 2 C -0.159 4.159 3 Si 0.706 3.294 4 H -0.194 1.194 5 H -0.199 1.199 6 H -0.192 1.192 7 C -0.440 4.440 8 H 0.140 0.860 9 N -0.211 5.211 10 C 0.222 3.778 11 O -0.464 6.464 12 C -0.004 4.004 13 N -0.370 5.370 14 C 0.408 3.592 15 O -0.451 6.451 16 N -0.326 5.326 17 C 0.121 3.879 18 C -0.154 4.154 19 C -0.081 4.081 20 C -0.190 4.190 21 C 0.111 3.889 22 F -0.105 7.105 23 C -0.151 4.151 24 Cl -0.018 7.018 25 H 0.087 0.913 26 H 0.208 0.792 27 H 0.106 0.894 28 H 0.106 0.894 29 H 0.250 0.750 30 H 0.250 0.750 31 H 0.183 0.817 32 H 0.161 0.839 33 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 22.636 -9.494 1.196 24.576 hybrid contribution -0.157 0.302 -0.282 0.442 sum 22.480 -9.192 0.914 24.303 Atomic orbital electron populations 1.69614 1.05743 1.27919 1.47811 1.25078 0.95543 0.98227 0.97027 0.86663 0.79902 0.83704 0.79176 1.19350 1.19943 1.19189 1.19437 0.78880 0.96833 1.48847 0.86049 1.42099 1.07729 1.06091 1.65160 1.19568 0.87911 0.84966 0.85399 1.90547 1.69134 1.30875 1.55796 1.20910 0.93798 0.82054 1.03667 1.44777 1.04715 1.10087 1.77417 1.15714 0.83118 0.82275 0.78060 1.90885 1.54540 1.42676 1.57046 1.42668 1.05800 1.08349 1.75832 1.17012 0.83559 0.92428 0.94907 1.21620 0.93162 1.00976 0.99647 1.21045 0.94813 0.95654 0.96551 1.21099 1.00576 0.94660 1.02694 1.17044 0.89313 0.84079 0.98473 1.91541 1.86626 1.46763 1.85541 1.20605 0.90907 0.95301 1.08290 1.98386 1.66267 1.57714 1.79384 0.91301 0.79187 0.89401 0.89424 0.74999 0.74963 0.81707 0.83921 0.83865 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.87 -24.42 13.96 55.50 0.77 -23.65 16 2 C 0.05 1.20 5.50 -17.47 -0.10 1.10 16 3 Si 0.88 18.43 27.74 -169.99 -4.71 13.71 16 4 H -0.27 -5.53 7.11 56.52 0.40 -5.13 16 5 H -0.27 -5.79 7.11 56.52 0.40 -5.39 16 6 H -0.27 -5.06 6.52 56.52 0.37 -4.69 16 7 C -0.31 -8.34 10.16 -14.93 -0.15 -8.49 16 8 H 0.12 3.72 7.39 -52.49 -0.39 3.33 16 9 N -0.57 -12.76 5.09 -10.97 -0.06 -12.81 16 10 C 0.44 9.06 7.85 -10.99 -0.09 8.97 16 11 O -0.58 -13.99 15.24 5.55 0.08 -13.91 16 12 C 0.12 1.96 6.15 -5.19 -0.03 1.92 16 13 N -0.71 -10.33 5.53 -66.41 -0.37 -10.70 16 14 C 0.71 9.85 8.37 -86.91 -0.73 9.13 16 15 O -0.57 -9.12 13.51 5.29 0.07 -9.05 16 16 N -0.68 -7.81 5.19 -14.20 -0.07 -7.88 16 17 C 0.22 2.48 6.43 -83.65 -0.54 1.94 16 18 C -0.13 -1.41 8.72 -39.39 -0.34 -1.76 16 19 C -0.06 -0.49 10.04 -39.61 -0.40 -0.89 16 20 C -0.17 -1.36 10.02 -39.48 -0.40 -1.76 16 21 C 0.13 1.32 7.27 -39.42 -0.29 1.03 16 22 F -0.13 -1.33 16.84 2.25 0.04 -1.29 16 23 C -0.12 -1.29 6.34 -39.26 -0.25 -1.54 16 24 Cl -0.05 -0.48 27.45 -51.86 -1.42 -1.91 16 25 H 0.28 7.13 8.31 -40.82 -0.34 6.79 16 26 H 0.37 7.30 5.76 -40.82 -0.24 7.06 16 27 H 0.09 1.27 8.14 -51.93 -0.42 0.85 16 28 H 0.09 1.28 8.14 -51.93 -0.42 0.86 16 29 H 0.41 5.89 7.46 -40.82 -0.30 5.59 16 30 H 0.41 4.05 7.79 -40.82 -0.32 3.73 16 31 H 0.17 1.95 5.78 -52.49 -0.30 1.65 16 32 H 0.14 0.75 8.06 -52.49 -0.42 0.33 16 33 H 0.14 0.79 8.06 -52.49 -0.42 0.37 16 LS Contribution 313.02 15.07 4.72 4.72 Total: -1.00 -31.09 313.02 -6.66 -37.75 By element: Atomic # 1 Polarization: 17.75 SS G_CDS: -2.41 Total: 15.35 kcal Atomic # 6 Polarization: 12.96 SS G_CDS: -3.30 Total: 9.66 kcal Atomic # 7 Polarization: -55.31 SS G_CDS: 0.28 Total: -55.04 kcal Atomic # 8 Polarization: -23.11 SS G_CDS: 0.16 Total: -22.95 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 0.04 Total: -1.29 kcal Atomic # 14 Polarization: 18.43 SS G_CDS: -4.71 Total: 13.71 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.42 Total: -1.91 kcal Total LS contribution 4.72 Total: 4.72 kcal Total: -31.09 -6.66 -37.75 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000352972309.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -39.815 kcal (2) G-P(sol) polarization free energy of solvation -31.091 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.906 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.661 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.752 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.566 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds