Wall clock time and date at job start Tue Mar 31 2020 11:10:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.31001 * 1 3 3 C 1.50697 * 120.00235 * 2 1 4 4 H 1.09005 * 109.47279 * 4.99841 * 3 2 1 5 5 C 1.52997 * 109.47447 * 124.99831 * 3 2 1 6 6 N 1.46503 * 109.47503 * 245.00323 * 3 2 1 7 7 S 1.65591 * 120.00354 * 143.47385 * 6 3 2 8 8 O 1.42103 * 106.40241 * 47.99582 * 7 6 3 9 9 O 1.42099 * 106.40261 * 180.91795 * 7 6 3 10 10 C 1.76199 * 107.21950 * 294.45525 * 7 6 3 11 11 C 1.38640 * 119.75388 * 115.31444 * 10 7 6 12 12 C 1.37605 * 120.25923 * 179.76132 * 11 10 7 13 13 C 1.40743 * 119.77183 * 0.51583 * 12 11 10 14 14 C 1.41396 * 120.23547 * 179.76059 * 13 12 11 15 15 H 1.07996 * 120.00248 * 27.65453 * 14 13 12 16 16 C 1.39946 * 119.99819 * 207.64801 * 14 13 12 17 17 N 1.30819 * 120.00102 * 12.47250 * 16 14 13 18 18 Si 1.86800 * 120.00034 * 192.47339 * 16 14 13 19 19 H 1.48504 * 109.47181 * 359.97438 * 18 16 14 20 20 H 1.48497 * 109.47344 * 119.99653 * 18 16 14 21 21 H 1.48492 * 109.47080 * 240.00188 * 18 16 14 22 22 C 1.40677 * 119.52474 * 359.73836 * 13 12 11 23 23 C 1.37756 * 119.73196 * 0.02562 * 22 13 12 24 24 Cl 1.73599 * 119.89183 * 179.97438 * 23 22 13 25 25 H 1.07993 * 120.00017 * 359.97438 * 1 2 3 26 26 H 1.07996 * 119.99883 * 180.02562 * 1 2 3 27 27 H 1.08001 * 120.00064 * 180.02562 * 2 1 3 28 28 H 1.09004 * 109.47345 * 300.00561 * 5 3 2 29 29 H 1.09001 * 109.47628 * 179.97438 * 5 3 2 30 30 H 1.09006 * 109.47290 * 60.00413 * 5 3 2 31 31 H 0.97002 * 119.99579 * 323.47794 * 6 3 2 32 32 H 1.07995 * 119.86993 * 0.02562 * 11 10 7 33 33 H 1.07999 * 120.11227 * 180.23221 * 12 11 10 34 34 H 0.96998 * 120.00071 * 180.02562 * 17 16 14 35 35 H 1.07998 * 120.13499 * 180.02562 * 22 13 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.3100 0.0000 0.0000 3 6 2.0636 1.3050 0.0000 4 1 1.3586 2.1317 0.0895 5 6 3.0351 1.3331 1.1816 6 7 2.8132 1.4362 -1.2518 7 16 2.9697 2.9191 -1.9718 8 8 3.3679 3.8218 -0.9491 9 8 3.7203 2.7110 -3.1603 10 6 1.3604 3.4238 -2.4819 11 6 0.7752 4.5412 -1.9066 12 6 -0.4792 4.9474 -2.3006 13 6 -1.1733 4.2178 -3.2838 14 6 -2.4647 4.6235 -3.6923 15 1 -2.7501 5.6631 -3.6270 16 6 -3.3731 3.6780 -4.1815 17 7 -3.1291 2.4009 -4.0374 18 14 -4.9340 4.2395 -5.0403 19 1 -4.9741 5.7236 -5.0739 20 1 -4.9526 3.7119 -6.4282 21 1 -6.1166 3.7296 -4.3010 22 6 -0.5728 3.0824 -3.8575 23 6 0.6858 2.6964 -3.4517 24 17 1.4304 1.2955 -4.1564 25 1 -0.5400 0.9352 0.0004 26 1 -0.5400 -0.9353 0.0004 27 1 1.8500 -0.9353 -0.0004 28 1 2.4773 1.2355 2.1130 29 1 3.5804 2.2768 1.1814 30 1 3.7401 0.5065 1.0921 31 1 3.2179 0.6542 -1.6589 32 1 1.3075 5.0975 -1.1493 33 1 -0.9313 5.8204 -1.8535 34 1 -3.7585 1.7455 -4.3767 35 1 -1.0964 2.5155 -4.6131 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000451301486.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:10:45 Heat of formation + Delta-G solvation = -57.069733 kcal Electronic energy + Delta-G solvation = -22271.150526 eV Core-core repulsion = 18807.721387 eV Total energy + Delta-G solvation = -3463.429139 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 315.048 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -37.87535 -37.01099 -36.36592 -35.59144 -35.09864 -34.08825 -32.01601 -30.32181 -29.48082 -29.03152 -26.02289 -22.91409 -21.77380 -21.33393 -20.03531 -18.78789 -17.83530 -17.07139 -16.55737 -16.25337 -15.61307 -14.72092 -14.51064 -14.05548 -13.83646 -13.65686 -13.41948 -12.80887 -12.74053 -12.53303 -12.42819 -12.12093 -11.73338 -11.63310 -11.48338 -11.35340 -11.33815 -11.27664 -11.18586 -10.59811 -10.54757 -10.47443 -10.37548 -10.08042 -9.71267 -9.63258 -9.33617 -9.05915 -8.08574 -7.72820 -7.22544 -4.96126 1.22944 2.02425 2.43638 2.63857 2.81548 2.84759 2.89846 3.01171 3.58982 3.78261 4.10782 4.48787 4.86946 5.10348 5.21999 5.27953 5.46488 5.57624 5.62396 5.92576 5.94391 6.06143 6.30458 6.33365 6.42856 6.56375 6.67300 6.77017 6.80163 6.93571 6.99006 7.16002 7.31560 7.41112 7.57534 7.75702 8.08348 8.34356 8.39725 9.67101 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.017466 B = 0.005049 C = 0.004815 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1602.689318 B = 5544.864540 C = 5814.278111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.167 4.167 3 C 0.185 3.815 4 H 0.088 0.912 5 C -0.166 4.166 6 N -1.113 6.113 7 S 2.696 3.304 8 O -0.985 6.985 9 O -0.971 6.971 10 C -0.790 4.790 11 C 0.007 3.993 12 C -0.234 4.234 13 C 0.143 3.857 14 C -0.426 4.426 15 H 0.092 0.908 16 C 0.069 3.931 17 N -0.765 5.765 18 Si 0.921 3.079 19 H -0.256 1.256 20 H -0.267 1.267 21 H -0.269 1.269 22 C -0.165 4.165 23 C 0.078 3.922 24 Cl -0.101 7.101 25 H 0.102 0.898 26 H 0.098 0.902 27 H 0.109 0.891 28 H 0.063 0.937 29 H 0.070 0.930 30 H 0.057 0.943 31 H 0.411 0.589 32 H 0.117 0.883 33 H 0.107 0.893 34 H 0.291 0.709 35 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.372 -4.432 5.188 7.224 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.187 4.187 3 C 0.078 3.922 4 H 0.106 0.894 5 C -0.225 4.225 6 N -0.868 5.868 7 S 2.792 3.208 8 O -0.975 6.975 9 O -0.961 6.961 10 C -0.885 4.885 11 C -0.013 4.013 12 C -0.255 4.255 13 C 0.139 3.861 14 C -0.453 4.453 15 H 0.110 0.890 16 C -0.154 4.154 17 N -0.387 5.387 18 Si 0.744 3.256 19 H -0.179 1.179 20 H -0.192 1.192 21 H -0.194 1.194 22 C -0.185 4.185 23 C 0.049 3.951 24 Cl -0.073 7.073 25 H 0.120 0.880 26 H 0.116 0.884 27 H 0.127 0.873 28 H 0.082 0.918 29 H 0.089 0.911 30 H 0.076 0.924 31 H 0.244 0.756 32 H 0.135 0.865 33 H 0.125 0.875 34 H 0.102 0.898 35 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 3.080 -4.183 5.075 7.262 hybrid contribution -1.399 -0.557 -0.741 1.678 sum 1.681 -4.740 4.334 6.639 Atomic orbital electron populations 1.23967 0.95892 1.02354 0.97909 1.22961 0.95975 0.97734 1.01990 1.19730 0.92454 0.96618 0.83419 0.89368 1.22278 0.99712 1.03035 0.97449 1.55747 1.68740 1.27615 1.34748 1.01293 0.74607 0.72089 0.72853 1.93475 1.82004 1.63034 1.58982 1.93548 1.70387 1.85133 1.47080 1.29140 1.26541 1.13301 1.19497 1.20221 0.94052 0.92113 0.94963 1.21148 0.96815 1.04532 1.03000 1.17747 0.91920 0.89355 0.87070 1.19994 0.96149 0.96226 1.32950 0.88968 1.26170 1.01147 0.94398 0.93659 1.69775 1.35579 1.01938 1.31400 0.86027 0.79477 0.80664 0.79449 1.17919 1.19166 1.19409 1.21311 0.92304 1.01199 1.03722 1.20035 0.93514 0.87401 0.94116 1.98315 1.82450 1.42441 1.84074 0.87975 0.88414 0.87278 0.91781 0.91083 0.92386 0.75634 0.86469 0.87520 0.89788 0.84730 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 19. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.19 14.32 29.01 0.42 -1.77 16 2 C -0.17 -2.16 9.03 -36.03 -0.33 -2.48 16 3 C 0.18 2.65 3.14 -69.08 -0.22 2.43 16 4 H 0.09 1.37 7.54 -51.93 -0.39 0.98 16 5 C -0.17 -2.05 9.50 37.16 0.35 -1.70 16 6 N -1.11 -17.57 5.17 -5.88 -0.03 -17.60 16 7 S 2.70 52.96 4.95 -107.50 -0.53 52.43 16 8 O -0.98 -20.46 16.36 -57.17 -0.94 -21.39 16 9 O -0.97 -21.18 16.51 -57.17 -0.94 -22.12 16 10 C -0.79 -17.21 5.82 -39.25 -0.23 -17.44 16 11 C 0.01 0.14 9.52 -39.66 -0.38 -0.23 16 12 C -0.23 -5.24 9.79 -38.87 -0.38 -5.62 16 13 C 0.14 3.45 5.56 -106.83 -0.59 2.86 16 14 C -0.43 -9.90 9.06 -37.74 -0.34 -10.24 16 15 H 0.09 2.02 7.88 -52.49 -0.41 1.60 16 16 C 0.07 1.50 5.23 -17.34 -0.09 1.41 16 17 N -0.76 -17.36 10.86 55.55 0.60 -16.76 16 18 Si 0.92 16.33 29.58 -169.99 -5.03 11.30 16 19 H -0.26 -4.50 7.11 56.52 0.40 -4.09 16 20 H -0.27 -4.71 7.11 56.52 0.40 -4.31 16 21 H -0.27 -4.71 7.11 56.52 0.40 -4.30 16 22 C -0.16 -3.98 8.44 -38.84 -0.33 -4.31 16 23 C 0.08 1.77 6.29 -39.58 -0.25 1.52 16 24 Cl -0.10 -2.08 26.40 -51.86 -1.37 -3.45 16 25 H 0.10 1.51 7.84 -52.49 -0.41 1.10 16 26 H 0.10 1.15 8.06 -52.49 -0.42 0.72 16 27 H 0.11 1.20 8.06 -52.49 -0.42 0.78 16 28 H 0.06 0.68 8.14 -51.93 -0.42 0.26 16 29 H 0.07 0.97 7.80 -51.93 -0.41 0.57 16 30 H 0.06 0.63 8.14 -51.93 -0.42 0.20 16 31 H 0.41 5.70 8.84 -34.46 -0.30 5.40 16 32 H 0.12 2.29 7.31 -52.49 -0.38 1.91 16 33 H 0.11 2.16 8.06 -52.49 -0.42 1.74 16 34 H 0.29 5.93 8.30 -40.82 -0.34 5.59 16 35 H 0.14 3.34 6.20 -52.49 -0.33 3.02 16 LS Contribution 329.02 15.07 4.96 4.96 Total: -1.00 -27.51 329.02 -9.52 -37.03 By element: Atomic # 1 Polarization: 15.05 SS G_CDS: -3.88 Total: 11.16 kcal Atomic # 6 Polarization: -33.20 SS G_CDS: -2.36 Total: -35.57 kcal Atomic # 7 Polarization: -34.93 SS G_CDS: 0.57 Total: -34.36 kcal Atomic # 8 Polarization: -41.64 SS G_CDS: -1.88 Total: -43.51 kcal Atomic # 14 Polarization: 16.33 SS G_CDS: -5.03 Total: 11.30 kcal Atomic # 16 Polarization: 52.96 SS G_CDS: -0.53 Total: 52.43 kcal Atomic # 17 Polarization: -2.08 SS G_CDS: -1.37 Total: -3.45 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -27.51 -9.52 -37.03 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000451301486.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.040 kcal (2) G-P(sol) polarization free energy of solvation -27.505 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.525 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.030 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.070 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds