Wall clock time and date at job start Tue Mar 31 2020 10:44:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31406 * 1 3 3 Si 1.86795 * 120.00014 * 2 1 4 4 H 1.48501 * 109.47336 * 269.99950 * 3 2 1 5 5 H 1.48501 * 109.47371 * 30.00065 * 3 2 1 6 6 H 1.48501 * 109.47251 * 149.99827 * 3 2 1 7 7 C 1.38950 * 120.00238 * 179.97438 * 2 1 3 8 8 H 1.07994 * 120.00233 * 179.97438 * 7 2 1 9 9 N 1.37099 * 119.99702 * 0.02562 * 7 2 1 10 10 C 1.34777 * 119.99877 * 179.97438 * 9 7 2 11 11 O 1.21297 * 120.00029 * 359.97438 * 10 9 7 12 12 C 1.50707 * 120.00197 * 179.97438 * 10 9 7 13 13 O 1.45192 * 109.47278 * 179.97438 * 12 10 9 14 14 C 1.34230 * 117.00018 * 180.02562 * 13 12 10 15 15 O 1.20826 * 120.00015 * 359.97438 * 14 13 12 16 16 C 1.50701 * 120.00046 * 180.02562 * 14 13 12 17 17 C 1.50703 * 109.47064 * 179.97438 * 16 14 13 18 18 C 1.38254 * 119.97961 * 264.72459 * 17 16 14 19 19 C 1.38179 * 120.03385 * 179.72747 * 18 17 16 20 20 C 1.38492 * 120.00390 * 0.54438 * 19 18 17 21 21 F 1.35097 * 120.01689 * 179.74961 * 20 19 18 22 22 C 1.38413 * 119.95971 * 359.72936 * 20 19 18 23 23 C 1.38335 * 119.96270 * 0.02562 * 22 20 19 24 24 Cl 1.73601 * 119.99864 * 179.97438 * 23 22 20 25 25 H 0.97003 * 120.00092 * 0.02562 * 1 2 3 26 26 H 0.96999 * 120.00385 * 359.97438 * 9 7 2 27 27 H 1.09001 * 109.46950 * 59.99192 * 12 10 9 28 28 H 1.08998 * 109.46940 * 300.00031 * 12 10 9 29 29 H 1.09002 * 109.47060 * 299.99765 * 16 14 13 30 30 H 1.09001 * 109.47380 * 59.99853 * 16 14 13 31 31 H 1.07993 * 119.97887 * 0.02562 * 18 17 16 32 32 H 1.08003 * 119.99413 * 180.27758 * 19 18 17 33 33 H 1.07997 * 120.01621 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3141 0.0000 0.0000 3 14 2.2480 1.6177 0.0000 4 1 2.4956 2.0464 -1.4001 5 1 1.4455 2.6527 0.7000 6 1 3.5456 1.4402 0.7001 7 6 2.0089 -1.2033 0.0005 8 1 3.0888 -1.2033 0.0001 9 7 1.3234 -2.3906 0.0005 10 6 1.9972 -3.5578 0.0005 11 8 3.2102 -3.5578 0.0001 12 6 1.2438 -4.8630 0.0011 13 8 2.1873 -5.9666 0.0004 14 6 1.6743 -7.2069 0.0003 15 8 0.4764 -7.3653 0.0012 16 6 2.5923 -8.4021 0.0001 17 6 1.7715 -9.6660 0.0006 18 6 1.4880 -10.3051 1.1933 19 6 0.7308 -11.4610 1.1956 20 6 0.2649 -11.9860 0.0018 21 9 -0.4712 -13.1189 0.0032 22 6 0.5535 -11.3492 -1.1928 23 6 1.3074 -10.1894 -1.1929 24 17 1.6705 -9.3902 -2.6907 25 1 -0.4850 0.8401 -0.0004 26 1 0.3534 -2.3907 0.0005 27 1 0.6167 -4.9209 -0.8885 28 1 0.6175 -4.9205 0.8914 29 1 3.2211 -8.3771 -0.8899 30 1 3.2212 -8.3773 0.8900 31 1 1.8546 -9.8982 2.1240 32 1 0.5060 -11.9573 2.1281 33 1 0.1902 -11.7576 -2.1243 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000768071070.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:44:17 Heat of formation + Delta-G solvation = -150.280992 kcal Electronic energy + Delta-G solvation = -22415.568089 eV Core-core repulsion = 18381.883831 eV Total energy + Delta-G solvation = -4033.684258 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 315.051 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -49.32008 -40.61640 -39.44713 -38.10856 -36.81280 -36.12662 -34.01071 -33.16738 -31.40028 -31.38075 -28.96396 -27.43305 -24.62200 -23.60012 -22.68420 -20.74932 -19.58974 -18.24460 -18.08567 -17.64418 -17.26885 -16.57887 -16.30036 -16.03345 -15.72219 -15.47815 -14.98673 -14.54085 -14.43432 -14.23462 -13.95972 -13.83685 -13.45699 -12.84248 -12.67401 -12.49570 -12.08566 -11.98189 -11.71503 -11.65115 -11.62895 -11.25879 -11.14147 -10.48741 -10.45125 -10.42485 -10.30005 -9.61469 -9.40340 -9.02117 -8.53125 -8.09352 -6.50885 -3.92981 0.51724 0.64831 1.67680 2.27632 2.59950 3.11972 3.12731 3.23023 3.29350 3.72777 3.78851 4.10800 4.13053 4.23881 4.45587 4.65716 4.66944 4.96714 5.05967 5.09960 5.14374 5.24943 5.43636 5.46949 5.56705 5.64376 5.68595 5.83238 6.04423 6.27148 6.60874 7.46911 7.81353 7.94913 8.47516 9.06151 9.38384 9.88215 10.66354 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.031843 B = 0.002397 C = 0.002360 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 879.093407 B =11676.346394 C =11860.613172 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.897 5.897 2 C 0.025 3.975 3 Si 0.934 3.066 4 H -0.277 1.277 5 H -0.283 1.283 6 H -0.268 1.268 7 C -0.302 4.302 8 H 0.106 0.894 9 N -0.553 5.553 10 C 0.438 3.562 11 O -0.576 6.576 12 C 0.061 3.939 13 O -0.324 6.324 14 C 0.461 3.539 15 O -0.504 6.504 16 C -0.079 4.079 17 C -0.074 4.074 18 C -0.062 4.062 19 C -0.147 4.147 20 C 0.114 3.886 21 F -0.133 7.133 22 C -0.146 4.146 23 C 0.008 3.992 24 Cl -0.047 7.047 25 H 0.274 0.726 26 H 0.395 0.605 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.122 0.878 30 H 0.124 0.876 31 H 0.146 0.854 32 H 0.144 0.856 33 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.516 -23.098 0.277 23.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.538 5.538 2 C -0.178 4.178 3 Si 0.760 3.240 4 H -0.203 1.203 5 H -0.208 1.208 6 H -0.193 1.193 7 C -0.431 4.431 8 H 0.124 0.876 9 N -0.190 5.190 10 C 0.223 3.777 11 O -0.460 6.460 12 C -0.016 4.016 13 O -0.238 6.238 14 C 0.303 3.697 15 O -0.393 6.393 16 C -0.116 4.116 17 C -0.075 4.075 18 C -0.080 4.080 19 C -0.166 4.166 20 C 0.094 3.906 21 F -0.112 7.112 22 C -0.166 4.166 23 C -0.019 4.019 24 Cl -0.018 7.018 25 H 0.084 0.916 26 H 0.228 0.772 27 H 0.105 0.895 28 H 0.105 0.895 29 H 0.140 0.860 30 H 0.142 0.858 31 H 0.164 0.836 32 H 0.162 0.838 33 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 0.836 -22.902 0.141 22.918 hybrid contribution -0.651 0.728 -0.200 0.997 sum 0.185 -22.174 -0.059 22.175 Atomic orbital electron populations 1.69612 1.06012 1.28499 1.49647 1.25314 0.95686 0.99882 0.96887 0.85798 0.79231 0.80412 0.78511 1.20252 1.20809 1.19264 1.19724 0.93478 0.81748 1.48199 0.87603 1.41710 1.09378 1.04101 1.63810 1.19322 0.88337 0.84071 0.85979 1.90562 1.13396 1.86793 1.55263 1.22754 0.90830 0.84519 1.03520 1.86533 1.40328 1.14053 1.82931 1.23324 0.88519 0.84792 0.73073 1.90682 1.16597 1.86773 1.45206 1.20300 0.96840 0.86592 1.07913 1.19239 0.99946 0.96344 0.91983 1.20885 0.95935 0.93719 0.97443 1.21217 1.00091 0.97793 0.97522 1.17462 0.94584 0.84507 0.94013 1.91532 1.74463 1.47840 1.97323 1.20924 1.01192 0.95864 0.98579 1.20489 0.99313 0.94313 0.87787 1.98413 1.93012 1.79090 1.31293 0.91614 0.77157 0.89537 0.89526 0.85995 0.85788 0.83632 0.83799 0.83470 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -24.01 13.05 55.50 0.72 -23.29 16 2 C 0.02 0.65 5.50 -17.47 -0.10 0.56 16 3 Si 0.93 20.61 29.55 -169.99 -5.02 15.58 16 4 H -0.28 -6.04 7.11 56.52 0.40 -5.63 16 5 H -0.28 -6.10 7.11 56.52 0.40 -5.70 16 6 H -0.27 -5.89 7.11 56.52 0.40 -5.49 16 7 C -0.30 -8.30 9.68 -14.93 -0.14 -8.45 16 8 H 0.11 3.03 7.16 -52.49 -0.38 2.65 16 9 N -0.55 -13.91 5.29 -10.96 -0.06 -13.97 16 10 C 0.44 10.48 7.86 -10.98 -0.09 10.39 16 11 O -0.58 -15.86 16.08 -14.12 -0.23 -16.09 16 12 C 0.06 1.15 5.94 36.01 0.21 1.37 16 13 O -0.32 -5.83 9.75 -45.90 -0.45 -6.28 16 14 C 0.46 6.85 7.95 36.01 0.29 7.13 16 15 O -0.50 -8.45 15.78 -18.75 -0.30 -8.75 16 16 C -0.08 -0.82 5.45 -29.03 -0.16 -0.98 16 17 C -0.07 -0.74 4.38 -104.58 -0.46 -1.20 16 18 C -0.06 -0.50 9.68 -39.60 -0.38 -0.89 16 19 C -0.15 -1.17 10.03 -39.51 -0.40 -1.56 16 20 C 0.11 1.05 7.30 -39.42 -0.29 0.76 16 21 F -0.13 -1.27 17.27 2.25 0.04 -1.23 16 22 C -0.15 -1.38 9.81 -39.48 -0.39 -1.76 16 23 C 0.01 0.08 6.31 -39.51 -0.25 -0.17 16 24 Cl -0.05 -0.52 27.40 -51.86 -1.42 -1.94 16 25 H 0.27 6.91 8.31 -40.82 -0.34 6.57 16 26 H 0.39 9.43 7.90 -40.82 -0.32 9.11 16 27 H 0.09 1.50 8.13 -51.93 -0.42 1.08 16 28 H 0.09 1.48 8.13 -51.93 -0.42 1.06 16 29 H 0.12 1.16 7.12 -51.93 -0.37 0.79 16 30 H 0.12 0.93 8.05 -51.93 -0.42 0.52 16 31 H 0.15 0.84 8.06 -52.49 -0.42 0.42 16 32 H 0.14 0.81 8.06 -52.48 -0.42 0.38 16 33 H 0.15 1.16 8.06 -52.49 -0.42 0.73 16 LS Contribution 324.36 15.07 4.89 4.89 Total: -1.00 -32.66 324.36 -6.70 -39.36 By element: Atomic # 1 Polarization: 9.23 SS G_CDS: -2.73 Total: 6.50 kcal Atomic # 6 Polarization: 7.35 SS G_CDS: -2.15 Total: 5.21 kcal Atomic # 7 Polarization: -37.92 SS G_CDS: 0.67 Total: -37.26 kcal Atomic # 8 Polarization: -30.14 SS G_CDS: -0.97 Total: -31.11 kcal Atomic # 9 Polarization: -1.27 SS G_CDS: 0.04 Total: -1.23 kcal Atomic # 14 Polarization: 20.61 SS G_CDS: -5.02 Total: 15.58 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.42 Total: -1.94 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -32.66 -6.70 -39.36 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000768071070.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.918 kcal (2) G-P(sol) polarization free energy of solvation -32.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.702 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.363 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.281 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds