Wall clock time and date at job start Tue Mar 31 2020 11:34:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13607 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39603 * 120.48254 * 336.07500 * 3 2 1 5 5 N 1.31635 * 120.66326 * 179.76615 * 4 3 2 6 6 C 1.32574 * 121.79193 * 0.52905 * 5 4 3 7 7 N 1.38687 * 119.54738 * 179.75377 * 6 5 4 8 8 C 1.39824 * 119.99839 * 353.70946 * 7 6 5 9 9 C 1.38770 * 120.10860 * 335.16105 * 8 7 6 10 10 C 1.38180 * 119.99582 * 180.02562 * 9 8 7 11 11 C 1.38359 * 120.20305 * 0.02562 * 10 9 8 12 12 C 1.38171 * 120.21419 * 359.74516 * 11 10 9 13 13 C 1.38729 * 120.00295 * 0.50821 * 12 11 10 14 14 O 1.35779 * 120.10242 * 179.76540 * 13 12 11 15 15 C 1.34800 * 117.00110 * 5.26647 * 14 13 12 16 16 H 1.08006 * 120.00066 * 354.97442 * 15 14 13 17 17 C 1.38635 * 120.00447 * 174.97019 * 15 14 13 18 18 N 1.31574 * 119.99570 * 0.27546 * 17 15 14 19 19 Si 1.86801 * 120.00198 * 180.02562 * 17 15 14 20 20 H 1.48499 * 109.47126 * 89.99687 * 19 17 15 21 21 H 1.48494 * 109.46707 * 210.00112 * 19 17 15 22 22 H 1.48501 * 109.46918 * 329.99449 * 19 17 15 23 23 C 1.39456 * 120.90799 * 359.46418 * 6 5 4 24 24 Cl 1.73601 * 120.38522 * 180.23700 * 23 6 5 25 25 C 1.37998 * 119.23342 * 0.26710 * 23 6 5 26 26 H 1.07998 * 119.67117 * 0.04270 * 4 3 2 27 27 H 0.97004 * 119.99956 * 173.71091 * 7 6 5 28 28 H 1.07998 * 120.00085 * 0.04820 * 9 8 7 29 29 H 1.07999 * 119.89871 * 179.97438 * 10 9 8 30 30 H 1.07995 * 119.88982 * 179.97438 * 11 10 9 31 31 H 1.07995 * 120.00053 * 180.25636 * 12 11 10 32 32 H 0.97001 * 120.00133 * 359.72625 * 18 17 15 33 33 H 1.08000 * 120.81333 * 179.97438 * 25 23 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2767 -1.0987 0.4879 5 7 4.5930 -1.1038 0.4854 6 6 5.2946 -0.0733 0.0344 7 7 6.6803 -0.1264 0.0582 8 6 7.3282 -1.2015 0.6740 9 6 6.6876 -1.9207 1.6730 10 6 7.3303 -2.9825 2.2804 11 6 8.6127 -3.3319 1.8961 12 6 9.2568 -2.6247 0.8990 13 6 8.6217 -1.5538 0.2870 14 8 9.2546 -0.8545 -0.6897 15 6 10.4540 -1.3174 -1.0948 16 1 10.9066 -2.1586 -0.5906 17 6 11.1068 -0.7140 -2.1586 18 7 10.5580 0.3141 -2.7694 19 14 12.7687 -1.3560 -2.7203 20 1 12.5711 -2.4009 -3.7567 21 1 13.5644 -0.2387 -3.2890 22 1 13.4916 -1.9387 -1.5613 23 6 4.6584 1.0610 -0.4690 24 17 5.5905 2.4003 -1.0617 25 6 3.2794 1.1068 -0.4901 26 1 2.7396 -1.9555 0.8671 27 1 7.1999 0.5824 -0.3524 28 1 5.6866 -1.6507 1.9756 29 1 6.8304 -3.5408 3.0581 30 1 9.1104 -4.1623 2.3745 31 1 10.2562 -2.9029 0.5989 32 1 9.6949 0.6472 -2.4779 33 1 2.7604 1.9727 -0.8740 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001212596075.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:34:51 Heat of formation + Delta-G solvation = 70.263073 kcal Electronic energy + Delta-G solvation = -22296.844953 eV Core-core repulsion = 18735.786179 eV Total energy + Delta-G solvation = -3561.058774 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 315.052 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -40.84327 -39.33094 -37.20307 -36.78790 -36.46524 -35.30284 -32.66297 -32.37644 -30.86816 -29.32996 -28.17977 -25.16210 -24.27912 -23.99524 -21.74341 -21.29645 -19.33535 -18.59656 -18.07891 -17.78320 -16.55752 -15.65199 -15.32170 -15.22472 -14.87811 -14.48012 -14.25755 -14.01755 -13.81962 -13.73072 -13.57589 -13.12160 -13.07017 -12.96012 -12.65345 -12.19616 -11.88756 -11.44713 -11.22412 -11.06543 -10.89767 -10.75467 -10.61280 -10.38389 -9.88394 -9.77289 -9.41333 -8.90493 -8.74269 -7.77169 -6.99742 -6.87913 -4.16779 0.47611 0.85649 1.88164 2.02956 2.19542 2.56521 2.83608 3.02780 3.18101 3.23321 3.36840 3.65860 3.74303 4.00425 4.22437 4.44709 4.47884 4.59582 4.86142 5.06516 5.08214 5.29710 5.53364 5.61321 5.64782 5.87750 5.95239 6.11420 6.34966 6.61555 6.66365 6.90830 7.18181 7.19982 7.26808 7.37077 7.45609 7.62598 7.94026 8.27124 8.78148 9.42658 10.55215 Molecular weight = 315.05amu Principal moments of inertia in cm(-1) A = 0.015419 B = 0.004065 C = 0.003367 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1815.484198 B = 6886.510725 C = 8313.328201 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.431 5.431 2 C 0.273 3.727 3 C -0.156 4.156 4 C 0.214 3.786 5 N -0.514 5.514 6 C 0.437 3.563 7 N -0.611 5.611 8 C 0.062 3.938 9 C -0.076 4.076 10 C -0.193 4.193 11 C -0.083 4.083 12 C -0.216 4.216 13 C 0.137 3.863 14 O -0.204 6.204 15 C -0.469 4.469 16 H 0.086 0.914 17 C 0.012 3.988 18 N -0.878 5.878 19 Si 1.098 2.902 20 H -0.281 1.281 21 H -0.275 1.275 22 H -0.282 1.282 23 C -0.163 4.163 24 Cl -0.044 7.044 25 C 0.028 3.972 26 H 0.172 0.828 27 H 0.427 0.573 28 H 0.143 0.857 29 H 0.112 0.888 30 H 0.110 0.890 31 H 0.133 0.867 32 H 0.280 0.720 33 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.138 -0.522 6.300 11.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.107 5.107 2 C -0.042 4.042 3 C -0.166 4.166 4 C 0.049 3.951 5 N -0.231 5.231 6 C 0.198 3.802 7 N -0.229 5.229 8 C -0.033 4.033 9 C -0.096 4.096 10 C -0.213 4.213 11 C -0.102 4.102 12 C -0.236 4.236 13 C 0.083 3.917 14 O -0.109 6.109 15 C -0.544 4.544 16 H 0.103 0.897 17 C -0.194 4.194 18 N -0.509 5.509 19 Si 0.922 3.078 20 H -0.207 1.207 21 H -0.200 1.200 22 H -0.208 1.208 23 C -0.198 4.198 24 Cl -0.015 7.015 25 C 0.000 4.000 26 H 0.189 0.811 27 H 0.268 0.732 28 H 0.160 0.840 29 H 0.130 0.870 30 H 0.128 0.872 31 H 0.150 0.850 32 H 0.090 0.910 33 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -8.980 -0.715 5.321 10.462 hybrid contribution -0.834 0.714 0.559 1.232 sum -9.814 -0.001 5.880 11.441 Atomic orbital electron populations 1.81267 1.11862 1.07599 1.09986 1.25219 0.91989 0.93820 0.93190 1.16510 0.85565 0.99099 1.15424 1.22825 0.88439 0.95163 0.88645 1.67878 1.07493 1.24871 1.22840 1.18291 0.85808 0.87619 0.88482 1.42117 1.01409 1.24266 1.55125 1.16929 0.91195 0.95120 1.00070 1.20976 0.99977 0.95348 0.93328 1.20555 0.96033 1.00690 1.03999 1.20839 0.94710 0.98459 0.96225 1.20996 1.02087 0.99273 1.01202 1.18899 0.90491 0.91668 0.90644 1.83562 1.33239 1.47560 1.46542 1.22214 0.93907 1.19343 1.18982 0.89660 1.26534 1.05253 0.95441 0.92147 1.70582 1.18658 1.21745 1.39961 0.83056 0.72369 0.76044 0.76348 1.20672 1.20029 1.20752 1.20947 0.92665 0.92569 1.13581 1.98402 1.72334 1.43894 1.86909 1.21152 0.90893 0.96894 0.91073 0.81067 0.73246 0.83970 0.87028 0.87187 0.84985 0.90963 0.83121 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -5.56 18.54 41.84 0.78 -4.79 16 2 C 0.27 2.95 15.37 -22.47 -0.35 2.60 16 3 C -0.16 -1.55 5.75 -106.67 -0.61 -2.17 16 4 C 0.21 2.18 10.91 -17.13 -0.19 2.00 16 5 N -0.51 -6.94 6.53 -12.07 -0.08 -7.02 16 6 C 0.44 6.46 7.27 -155.06 -1.13 5.34 16 7 N -0.61 -10.72 5.36 -9.83 -0.05 -10.78 16 8 C 0.06 1.19 6.46 -83.53 -0.54 0.65 16 9 C -0.08 -1.28 8.64 -39.41 -0.34 -1.63 16 10 C -0.19 -3.10 10.04 -39.56 -0.40 -3.50 16 11 C -0.08 -1.42 10.04 -39.56 -0.40 -1.82 16 12 C -0.22 -4.40 9.16 -39.42 -0.36 -4.76 16 13 C 0.14 3.06 6.67 -38.92 -0.26 2.80 16 14 O -0.20 -5.24 8.58 0.04 0.00 -5.24 16 15 C -0.47 -12.34 9.49 30.88 0.29 -12.05 16 16 H 0.09 2.12 5.20 -52.48 -0.27 1.85 16 17 C 0.01 0.31 5.49 -17.52 -0.10 0.22 16 18 N -0.88 -24.73 13.70 55.48 0.76 -23.97 16 19 Si 1.10 22.66 29.92 -169.99 -5.09 17.58 16 20 H -0.28 -5.58 7.11 56.52 0.40 -5.17 16 21 H -0.28 -5.65 7.11 56.52 0.40 -5.25 16 22 H -0.28 -5.42 7.11 56.52 0.40 -5.02 16 23 C -0.16 -2.06 6.35 -39.22 -0.25 -2.31 16 24 Cl -0.04 -0.57 27.60 -51.86 -1.43 -2.00 16 25 C 0.03 0.28 9.69 -38.88 -0.38 -0.10 16 26 H 0.17 1.22 8.06 -52.49 -0.42 0.80 16 27 H 0.43 7.76 7.00 -40.82 -0.29 7.48 16 28 H 0.14 2.16 5.59 -52.49 -0.29 1.87 16 29 H 0.11 1.47 8.06 -52.49 -0.42 1.05 16 30 H 0.11 1.56 8.06 -52.49 -0.42 1.14 16 31 H 0.13 2.72 5.63 -52.49 -0.30 2.43 16 32 H 0.28 7.99 7.97 -40.82 -0.33 7.67 16 33 H 0.15 1.19 8.06 -52.49 -0.42 0.76 16 LS Contribution 316.49 15.07 4.77 4.77 Total: -1.00 -29.28 316.49 -7.30 -36.58 By element: Atomic # 1 Polarization: 11.55 SS G_CDS: -1.96 Total: 9.59 kcal Atomic # 6 Polarization: -9.73 SS G_CDS: -5.00 Total: -14.72 kcal Atomic # 7 Polarization: -47.96 SS G_CDS: 1.40 Total: -46.56 kcal Atomic # 8 Polarization: -5.24 SS G_CDS: 0.00 Total: -5.24 kcal Atomic # 14 Polarization: 22.66 SS G_CDS: -5.09 Total: 17.58 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.43 Total: -2.00 kcal Total LS contribution 4.77 Total: 4.77 kcal Total: -29.28 -7.30 -36.58 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001212596075.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 106.847 kcal (2) G-P(sol) polarization free energy of solvation -29.285 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 77.562 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.299 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.584 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.263 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds