Wall clock time and date at job start Tue Mar 31 2020 10:58:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.46498 * 120.00279 * 2 1 4 4 C 1.50699 * 109.47382 * 270.00204 * 3 2 1 5 5 H 1.08005 * 119.99919 * 359.97438 * 4 3 2 6 6 C 1.37877 * 120.00335 * 179.97438 * 4 3 2 7 7 N 1.31514 * 119.99892 * 0.02562 * 6 4 3 8 8 Si 1.86802 * 119.99950 * 180.02562 * 6 4 3 9 9 H 1.48498 * 109.47438 * 0.02562 * 8 6 4 10 10 H 1.48502 * 109.47062 * 120.00457 * 8 6 4 11 11 H 1.48503 * 109.46734 * 240.00160 * 8 6 4 12 12 C 1.34782 * 119.99678 * 180.02562 * 2 1 3 13 13 O 1.21281 * 119.99622 * 179.97438 * 12 2 1 14 14 C 1.50695 * 120.00118 * 359.97438 * 12 2 1 15 15 C 1.53001 * 109.46890 * 180.02562 * 14 12 2 16 16 O 1.42901 * 109.46872 * 180.02562 * 15 14 12 17 17 C 1.35971 * 116.99902 * 179.97438 * 16 15 14 18 18 C 1.38689 * 120.03590 * 0.25602 * 17 16 15 19 19 C 1.38154 * 119.98291 * 180.25501 * 18 17 16 20 20 C 1.38476 * 120.05078 * 359.48616 * 19 18 17 21 21 F 1.35102 * 119.96302 * 180.27955 * 20 19 18 22 22 C 1.38432 * 120.06454 * 0.25792 * 20 19 18 23 23 C 1.38255 * 120.02356 * 0.02562 * 22 20 19 24 24 Cl 1.73595 * 120.02946 * 180.02562 * 23 22 20 25 25 H 1.09003 * 109.46764 * 270.00038 * 1 2 3 26 26 H 1.08997 * 109.47154 * 29.99494 * 1 2 3 27 27 H 1.08999 * 109.47176 * 150.00150 * 1 2 3 28 28 H 1.08998 * 109.46785 * 29.99946 * 3 2 1 29 29 H 1.08994 * 109.47460 * 150.00219 * 3 2 1 30 30 H 0.96998 * 119.99885 * 179.97438 * 7 6 4 31 31 H 1.09004 * 109.47329 * 60.00374 * 14 12 2 32 32 H 1.08995 * 109.47062 * 299.99785 * 14 12 2 33 33 H 1.08996 * 109.47538 * 60.00006 * 15 14 12 34 34 H 1.09009 * 109.47049 * 299.99804 * 15 14 12 35 35 H 1.07997 * 120.00714 * 359.97438 * 18 17 16 36 36 H 1.08002 * 119.97709 * 179.77131 * 19 18 17 37 37 H 1.08004 * 119.98567 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.4487 1.7038 -1.4208 5 1 2.0981 1.0958 -2.2417 6 6 3.1260 2.8780 -1.6727 7 7 3.5534 3.6180 -0.6731 8 14 3.4367 3.4175 -3.4339 9 1 2.8587 2.4176 -4.3673 10 1 2.7988 4.7382 -3.6669 11 1 4.8992 3.5262 -3.6676 12 6 2.1388 -1.1673 -0.0005 13 8 3.3516 -1.1673 -0.0010 14 6 1.3853 -2.4723 -0.0005 15 6 2.3795 -3.6352 -0.0005 16 8 1.6650 -4.8728 -0.0011 17 6 2.4055 -6.0131 -0.0017 18 6 3.7905 -5.9414 0.0036 19 6 4.5419 -7.1008 -0.0024 20 6 3.9132 -8.3346 -0.0029 21 9 4.6497 -9.4672 -0.0031 22 6 2.5308 -8.4086 -0.0029 23 6 1.7761 -7.2502 -0.0029 24 17 0.0426 -7.3428 -0.0021 25 1 -0.3633 0.0000 1.0277 26 1 -0.3633 0.8900 -0.5137 27 1 -0.3633 -0.8900 -0.5138 28 1 1.6084 2.0283 0.5138 29 1 3.1499 1.1384 0.5138 30 1 4.0303 4.4439 -0.8504 31 1 0.7583 -2.5299 -0.8903 32 1 0.7590 -2.5302 0.8897 33 1 3.0062 -3.5776 0.8894 34 1 3.0062 -3.5775 -0.8906 35 1 4.2816 -4.9796 0.0078 36 1 5.6205 -7.0448 -0.0020 37 1 2.0418 -9.3715 -0.0037 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037869168.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:58:04 Heat of formation + Delta-G solvation = -100.881439 kcal Electronic energy + Delta-G solvation = -22851.162316 eV Core-core repulsion = 18955.453278 eV Total energy + Delta-G solvation = -3895.709038 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -49.17081 -40.49509 -39.12200 -37.65236 -36.64056 -34.95579 -32.79936 -31.97213 -31.36310 -29.48973 -27.86327 -26.01564 -24.87106 -23.34815 -22.71261 -21.78001 -18.98010 -18.29495 -17.78240 -17.16121 -16.71774 -16.40716 -16.12862 -15.85257 -15.41694 -15.14594 -14.77063 -14.72026 -14.38415 -14.10330 -13.71336 -13.56041 -12.96157 -12.74336 -12.65569 -12.26080 -12.00897 -11.97704 -11.85350 -11.51857 -11.35008 -11.21746 -11.11743 -10.93222 -10.78365 -10.63455 -10.21718 -9.67609 -9.41208 -9.09692 -8.49293 -8.41453 -7.75280 -6.10004 -4.15070 0.59766 0.76023 1.78011 2.71250 3.05521 3.25570 3.26312 3.34261 3.38519 3.92026 3.96020 4.28847 4.40458 4.43643 4.67380 4.82485 4.88827 4.94388 5.11619 5.19122 5.25025 5.40060 5.49711 5.59198 5.68814 5.71344 5.73433 5.79557 5.89435 6.16504 6.23684 6.95279 6.98313 7.35892 7.43928 7.85891 8.16408 8.28754 8.80715 8.96045 9.50321 10.98193 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.019951 B = 0.002586 C = 0.002413 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1403.116411 B =10823.919347 C =11602.583479 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.598 5.598 3 C 0.244 3.756 4 C -0.527 4.527 5 H 0.058 0.942 6 C 0.061 3.939 7 N -0.894 5.894 8 Si 0.899 3.101 9 H -0.273 1.273 10 H -0.283 1.283 11 H -0.282 1.282 12 C 0.509 3.491 13 O -0.545 6.545 14 C -0.139 4.139 15 C 0.072 3.928 16 O -0.302 6.302 17 C 0.141 3.859 18 C -0.168 4.168 19 C -0.104 4.104 20 C 0.067 3.933 21 F -0.136 7.136 22 C -0.109 4.109 23 C -0.048 4.048 24 Cl -0.045 7.045 25 H 0.046 0.954 26 H 0.075 0.925 27 H 0.059 0.941 28 H 0.034 0.966 29 H 0.045 0.955 30 H 0.263 0.737 31 H 0.100 0.900 32 H 0.098 0.902 33 H 0.076 0.924 34 H 0.077 0.923 35 H 0.154 0.846 36 H 0.145 0.855 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.340 -22.173 2.865 22.986 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.330 5.330 3 C 0.125 3.875 4 C -0.566 4.566 5 H 0.076 0.924 6 C -0.141 4.141 7 N -0.533 5.533 8 Si 0.726 3.274 9 H -0.198 1.198 10 H -0.209 1.209 11 H -0.208 1.208 12 C 0.295 3.705 13 O -0.424 6.424 14 C -0.179 4.179 15 C -0.003 4.003 16 O -0.215 6.215 17 C 0.094 3.906 18 C -0.187 4.187 19 C -0.123 4.123 20 C 0.047 3.953 21 F -0.115 7.115 22 C -0.129 4.129 23 C -0.076 4.076 24 Cl -0.016 7.016 25 H 0.065 0.935 26 H 0.094 0.906 27 H 0.078 0.922 28 H 0.052 0.948 29 H 0.063 0.937 30 H 0.073 0.927 31 H 0.118 0.882 32 H 0.117 0.883 33 H 0.094 0.906 34 H 0.095 0.905 35 H 0.172 0.828 36 H 0.163 0.837 37 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -4.961 -21.965 2.912 22.706 hybrid contribution 0.266 0.323 -0.988 1.073 sum -4.694 -21.642 1.924 22.229 Atomic orbital electron populations 1.21695 0.81153 1.02844 1.00657 1.48137 1.06384 1.07706 1.70780 1.19335 0.92594 0.77917 0.97654 1.21455 1.36615 1.06325 0.92233 0.92381 1.24944 0.95311 0.96363 0.97512 1.69939 1.38324 1.14346 1.30715 0.86433 0.78112 0.78355 0.84469 1.19783 1.20921 1.20831 1.19925 0.87886 0.84820 0.77838 1.90684 1.13767 1.87301 1.50619 1.21528 0.99191 0.91778 1.05384 1.22642 0.94510 0.79712 1.03412 1.86096 1.35358 1.12507 1.87541 1.18673 0.89903 0.86071 0.95968 1.21277 0.91797 1.00327 1.05323 1.21094 1.01509 0.90289 0.99420 1.17301 0.88531 0.82439 1.06993 1.91515 1.76666 1.48994 1.94300 1.20781 0.91923 0.98400 1.01770 1.19823 0.86166 0.91360 1.10236 1.98385 1.07734 1.98518 1.96920 0.93500 0.90595 0.92212 0.94826 0.93732 0.92702 0.88155 0.88327 0.90611 0.90506 0.82846 0.83681 0.83180 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.20 10.24 59.84 0.61 1.81 16 2 N -0.60 -12.09 2.86 -182.96 -0.52 -12.61 16 3 C 0.24 6.21 5.16 -5.20 -0.03 6.18 16 4 C -0.53 -14.64 9.39 -34.44 -0.32 -14.96 16 5 H 0.06 1.61 7.81 -52.48 -0.41 1.20 16 6 C 0.06 1.71 5.46 -17.82 -0.10 1.61 16 7 N -0.89 -26.17 13.29 55.43 0.74 -25.44 16 8 Si 0.90 21.50 29.54 -169.99 -5.02 16.48 16 9 H -0.27 -6.44 7.11 56.52 0.40 -6.04 16 10 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 11 H -0.28 -6.76 7.11 56.52 0.40 -6.36 16 12 C 0.51 9.81 7.67 -10.99 -0.08 9.73 16 13 O -0.55 -12.71 15.56 5.56 0.09 -12.62 16 14 C -0.14 -1.87 4.62 -27.89 -0.13 -2.00 16 15 C 0.07 0.92 4.03 37.16 0.15 1.07 16 16 O -0.30 -3.69 9.60 -19.65 -0.19 -3.88 16 17 C 0.14 1.60 6.68 -39.21 -0.26 1.34 16 18 C -0.17 -1.70 9.04 -39.45 -0.36 -2.06 16 19 C -0.10 -0.95 10.02 -39.52 -0.40 -1.34 16 20 C 0.07 0.64 7.30 -39.42 -0.29 0.35 16 21 F -0.14 -1.36 17.27 2.25 0.04 -1.32 16 22 C -0.11 -1.01 9.80 -39.50 -0.39 -1.39 16 23 C -0.05 -0.51 6.33 -39.37 -0.25 -0.76 16 24 Cl -0.04 -0.46 28.50 -51.86 -1.48 -1.94 16 25 H 0.05 0.59 8.14 -51.93 -0.42 0.17 16 26 H 0.08 1.17 8.07 -51.93 -0.42 0.76 16 27 H 0.06 0.71 6.44 -51.93 -0.33 0.38 16 28 H 0.03 0.86 8.07 -51.93 -0.42 0.45 16 29 H 0.04 1.28 7.42 -51.93 -0.39 0.89 16 30 H 0.26 7.25 8.31 -40.82 -0.34 6.91 16 31 H 0.10 1.22 7.40 -51.93 -0.38 0.84 16 32 H 0.10 1.13 8.11 -51.93 -0.42 0.71 16 33 H 0.08 0.95 7.61 -51.93 -0.40 0.56 16 34 H 0.08 1.01 7.63 -51.92 -0.40 0.62 16 35 H 0.15 1.47 6.30 -52.49 -0.33 1.13 16 36 H 0.15 1.03 8.06 -52.49 -0.42 0.60 16 37 H 0.15 1.08 8.06 -52.48 -0.42 0.66 16 LS Contribution 341.09 15.07 5.14 5.14 Total: -1.00 -32.00 341.09 -7.34 -39.34 By element: Atomic # 1 Polarization: 1.57 SS G_CDS: -4.30 Total: -2.73 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -1.84 Total: -0.42 kcal Atomic # 7 Polarization: -38.26 SS G_CDS: 0.21 Total: -38.05 kcal Atomic # 8 Polarization: -16.40 SS G_CDS: -0.10 Total: -16.50 kcal Atomic # 9 Polarization: -1.36 SS G_CDS: 0.04 Total: -1.32 kcal Atomic # 14 Polarization: 21.50 SS G_CDS: -5.02 Total: 16.48 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -1.48 Total: -1.94 kcal Total LS contribution 5.14 Total: 5.14 kcal Total: -32.00 -7.34 -39.34 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037869168.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.541 kcal (2) G-P(sol) polarization free energy of solvation -31.997 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -93.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.343 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.340 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.881 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds