Wall clock time and date at job start Tue Mar 31 2020 10:40:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52993 * 109.47175 * 2 1 4 4 N 1.46501 * 109.47272 * 180.02562 * 3 2 1 5 5 C 1.37101 * 119.99714 * 264.74434 * 4 3 2 6 6 H 1.07999 * 119.99972 * 146.16486 * 5 4 3 7 7 C 1.38948 * 120.00271 * 326.16883 * 5 4 3 8 8 N 1.31409 * 119.99838 * 337.67384 * 7 5 4 9 9 Si 1.86802 * 120.00100 * 157.67992 * 7 5 4 10 10 H 1.48498 * 109.47146 * 59.99737 * 9 7 5 11 11 H 1.48496 * 109.47016 * 179.97438 * 9 7 5 12 12 H 1.48496 * 109.46893 * 299.99942 * 9 7 5 13 13 C 1.34770 * 120.00090 * 84.74633 * 4 3 2 14 14 O 1.21296 * 120.00189 * 179.97438 * 13 4 3 15 15 C 1.50698 * 120.00226 * 0.02562 * 13 4 3 16 16 O 1.42907 * 109.47214 * 180.02562 * 15 13 4 17 17 C 1.35974 * 116.99557 * 179.97438 * 16 15 13 18 18 C 1.38675 * 120.03565 * 0.25276 * 17 16 15 19 19 C 1.38167 * 119.98016 * 180.25756 * 18 17 16 20 20 C 1.38462 * 120.04864 * 359.48705 * 19 18 17 21 21 F 1.35101 * 119.96656 * 180.27982 * 20 19 18 22 22 C 1.38438 * 120.07160 * 0.25757 * 20 19 18 23 23 C 1.38258 * 120.01539 * 359.97438 * 22 20 19 24 24 Cl 1.73601 * 120.02869 * 180.02562 * 23 22 20 25 25 H 1.08999 * 109.46905 * 60.00203 * 1 2 3 26 26 H 1.09003 * 109.46852 * 180.02562 * 1 2 3 27 27 H 1.08996 * 109.47438 * 300.00029 * 1 2 3 28 28 H 1.09002 * 109.47329 * 239.99559 * 2 1 3 29 29 H 1.09005 * 109.47291 * 119.99720 * 2 1 3 30 30 H 1.09002 * 109.47352 * 59.99574 * 3 2 1 31 31 H 1.08999 * 109.47038 * 299.99716 * 3 2 1 32 32 H 0.97007 * 119.99841 * 179.97438 * 8 7 5 33 33 H 1.09001 * 109.47522 * 59.99935 * 15 13 4 34 34 H 1.08999 * 109.46835 * 299.99883 * 15 13 4 35 35 H 1.08003 * 120.01331 * 359.97438 * 18 17 16 36 36 H 1.08000 * 119.97502 * 179.76646 * 19 18 17 37 37 H 1.07997 * 119.99449 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 7 3.5050 1.4425 -0.0006 5 6 4.1909 1.5510 1.1815 6 1 5.1338 1.0397 1.3076 7 6 3.6731 2.3189 2.2173 8 7 2.8018 3.2682 1.9593 9 14 4.2155 2.0018 3.9765 10 1 5.6836 2.1969 4.0846 11 1 3.5224 2.9488 4.8864 12 1 3.8720 0.6081 4.3567 13 6 4.1784 1.3358 -1.1631 14 8 5.3913 1.3363 -1.1637 15 6 3.4244 1.2170 -2.4625 16 8 4.3526 1.1170 -3.5445 17 6 3.8323 1.0020 -4.7955 18 6 2.4576 0.9911 -4.9772 19 6 1.9301 0.8689 -6.2483 20 6 2.7732 0.7679 -7.3420 21 9 2.2556 0.6541 -8.5848 22 6 4.1459 0.7838 -7.1636 23 6 4.6768 0.9012 -5.8924 24 17 6.3981 0.9220 -5.6683 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8899 28 1 1.8934 -0.5139 -0.8899 29 1 1.8934 -0.5138 0.8900 30 1 1.6766 1.9563 0.8899 31 1 1.6767 1.9562 -0.8900 32 1 2.4400 3.8040 2.6825 33 1 2.7980 2.0982 -2.6010 34 1 2.7975 0.3257 -2.4386 35 1 1.7994 1.0736 -4.1249 36 1 0.8594 0.8566 -6.3894 37 1 4.8023 0.7046 -8.0175 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000060541914.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:40:33 Heat of formation + Delta-G solvation = -93.990587 kcal Electronic energy + Delta-G solvation = -23762.338349 eV Core-core repulsion = 19866.928121 eV Total energy + Delta-G solvation = -3895.410228 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -49.01940 -40.28431 -38.67467 -37.15096 -36.34359 -35.31098 -32.91794 -31.38965 -31.22663 -29.91063 -28.01243 -25.87269 -24.48264 -23.23911 -22.43535 -21.12633 -19.32692 -18.56352 -17.52870 -17.00903 -16.87169 -16.13177 -15.84490 -15.63729 -15.02823 -14.92652 -14.67281 -14.31852 -13.97148 -13.83535 -13.77147 -13.46110 -13.06154 -12.87402 -12.47894 -12.13538 -11.74852 -11.57911 -11.55135 -11.37312 -11.25346 -11.02463 -10.90970 -10.86315 -10.70135 -10.43171 -10.32885 -10.06028 -9.21524 -9.04821 -8.52806 -8.16946 -7.62011 -6.43874 -4.05346 0.78286 0.96141 2.07191 2.98681 3.13501 3.20905 3.24438 3.26546 3.70496 4.07687 4.11476 4.43807 4.59196 4.74760 4.84528 4.89946 5.12913 5.24797 5.31929 5.37608 5.48245 5.56019 5.63343 5.65656 5.84046 5.88317 5.91071 6.06165 6.22851 6.33532 6.40788 6.47106 6.78133 7.13806 7.24922 7.50659 8.11213 8.38845 9.06093 9.25950 9.84292 10.59886 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.018758 B = 0.003551 C = 0.003096 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1492.301980 B = 7882.639471 C = 9041.905041 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.142 4.142 3 C 0.097 3.903 4 N -0.434 5.434 5 C -0.308 4.308 6 H 0.095 0.905 7 C 0.038 3.962 8 N -0.867 5.867 9 Si 0.920 3.080 10 H -0.271 1.271 11 H -0.284 1.284 12 H -0.272 1.272 13 C 0.457 3.543 14 O -0.556 6.556 15 C 0.042 3.958 16 O -0.269 6.269 17 C 0.142 3.858 18 C -0.176 4.176 19 C -0.104 4.104 20 C 0.061 3.939 21 F -0.138 7.138 22 C -0.107 4.107 23 C -0.048 4.048 24 Cl -0.038 7.038 25 H 0.049 0.951 26 H 0.048 0.952 27 H 0.055 0.945 28 H 0.048 0.952 29 H 0.068 0.932 30 H 0.119 0.881 31 H 0.045 0.955 32 H 0.270 0.730 33 H 0.083 0.917 34 H 0.080 0.920 35 H 0.149 0.851 36 H 0.143 0.857 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.438 -4.705 -13.216 15.435 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.181 4.181 3 C -0.028 4.028 4 N -0.154 5.154 5 C -0.436 4.436 6 H 0.112 0.888 7 C -0.166 4.166 8 N -0.505 5.505 9 Si 0.747 3.253 10 H -0.196 1.196 11 H -0.209 1.209 12 H -0.198 1.198 13 C 0.243 3.757 14 O -0.437 6.437 15 C -0.036 4.036 16 O -0.179 6.179 17 C 0.093 3.907 18 C -0.195 4.195 19 C -0.123 4.123 20 C 0.041 3.959 21 F -0.117 7.117 22 C -0.127 4.127 23 C -0.076 4.076 24 Cl -0.009 7.009 25 H 0.068 0.932 26 H 0.067 0.933 27 H 0.074 0.926 28 H 0.066 0.934 29 H 0.087 0.913 30 H 0.137 0.863 31 H 0.064 0.936 32 H 0.080 0.920 33 H 0.101 0.899 34 H 0.098 0.902 35 H 0.167 0.833 36 H 0.161 0.839 37 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -5.574 -4.539 -13.035 14.885 hybrid contribution -0.214 -0.040 0.614 0.651 sum -5.788 -4.579 -12.420 14.447 Atomic orbital electron populations 1.21680 0.96101 1.00858 1.01665 1.22005 0.95092 0.99107 1.01880 1.21768 0.81851 0.94686 1.04456 1.43412 1.04641 1.63127 1.04223 1.19450 1.07179 1.28800 0.88124 0.88750 1.25343 0.97192 0.93469 1.00645 1.69903 1.30722 1.16671 1.33212 0.86090 0.79269 0.78344 0.81640 1.19609 1.20897 1.19780 1.19709 0.88218 0.84024 0.83732 1.90591 1.13495 1.53580 1.86082 1.22903 0.92098 1.02218 0.86377 1.86342 1.34534 1.85953 1.11093 1.18903 0.91210 0.94896 0.85666 1.21171 0.93348 1.06440 0.98502 1.21011 1.00631 0.99735 0.90950 1.17255 0.91091 1.07499 0.80017 1.91499 1.87090 1.93962 1.39137 1.20777 0.93954 1.01628 0.96300 1.19861 0.86327 1.09649 0.91758 1.98403 1.08346 1.96802 1.97356 0.93185 0.93296 0.92555 0.93366 0.91333 0.86336 0.93616 0.91999 0.89878 0.90180 0.83338 0.83900 0.83253 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.89 9.91 37.16 0.37 -1.52 16 2 C -0.14 -2.33 6.17 -26.74 -0.16 -2.50 16 3 C 0.10 1.92 4.71 -4.04 -0.02 1.90 16 4 N -0.43 -10.46 2.56 -114.82 -0.29 -10.75 16 5 C -0.31 -8.23 8.98 -14.93 -0.13 -8.37 16 6 H 0.09 2.66 7.70 -52.49 -0.40 2.26 16 7 C 0.04 0.96 4.92 -17.47 -0.09 0.88 16 8 N -0.87 -22.23 11.33 55.50 0.63 -21.61 16 9 Si 0.92 19.87 29.61 -169.99 -5.03 14.84 16 10 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 11 H -0.28 -5.99 7.11 56.52 0.40 -5.59 16 12 H -0.27 -5.75 7.11 56.52 0.40 -5.35 16 13 C 0.46 10.94 7.67 -10.99 -0.08 10.86 16 14 O -0.56 -15.74 16.32 -14.37 -0.23 -15.97 16 15 C 0.04 0.76 3.83 36.00 0.14 0.90 16 16 O -0.27 -5.01 9.13 -39.57 -0.36 -5.37 16 17 C 0.14 2.12 6.68 -39.21 -0.26 1.86 16 18 C -0.18 -2.09 9.04 -39.45 -0.36 -2.44 16 19 C -0.10 -1.08 10.02 -39.52 -0.40 -1.48 16 20 C 0.06 0.68 7.30 -39.43 -0.29 0.40 16 21 F -0.14 -1.55 17.27 2.25 0.04 -1.51 16 22 C -0.11 -1.24 9.80 -39.50 -0.39 -1.62 16 23 C -0.05 -0.68 6.33 -39.37 -0.25 -0.93 16 24 Cl -0.04 -0.57 28.50 -51.86 -1.48 -2.04 16 25 H 0.05 0.57 8.14 -51.93 -0.42 0.15 16 26 H 0.05 0.56 8.14 -51.93 -0.42 0.13 16 27 H 0.06 0.75 8.14 -51.93 -0.42 0.32 16 28 H 0.05 0.74 6.60 -51.93 -0.34 0.40 16 29 H 0.07 1.23 8.14 -51.93 -0.42 0.81 16 30 H 0.12 2.64 5.35 -51.93 -0.28 2.36 16 31 H 0.05 0.81 6.66 -51.93 -0.35 0.46 16 32 H 0.27 6.54 8.31 -40.82 -0.34 6.20 16 33 H 0.08 1.32 6.92 -51.93 -0.36 0.96 16 34 H 0.08 1.21 6.07 -51.93 -0.31 0.89 16 35 H 0.15 1.51 6.30 -52.48 -0.33 1.18 16 36 H 0.14 1.11 8.06 -52.49 -0.42 0.68 16 37 H 0.15 1.41 8.06 -52.49 -0.42 0.98 16 LS Contribution 333.97 15.07 5.03 5.03 Total: -1.00 -30.50 333.97 -7.67 -38.17 By element: Atomic # 1 Polarization: 5.33 SS G_CDS: -4.05 Total: 1.28 kcal Atomic # 6 Polarization: -0.14 SS G_CDS: -1.92 Total: -2.07 kcal Atomic # 7 Polarization: -32.69 SS G_CDS: 0.34 Total: -32.35 kcal Atomic # 8 Polarization: -20.75 SS G_CDS: -0.60 Total: -21.34 kcal Atomic # 9 Polarization: -1.55 SS G_CDS: 0.04 Total: -1.51 kcal Atomic # 14 Polarization: 19.87 SS G_CDS: -5.03 Total: 14.84 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.48 Total: -2.04 kcal Total LS contribution 5.03 Total: 5.03 kcal Total: -30.50 -7.67 -38.17 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000060541914.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.824 kcal (2) G-P(sol) polarization free energy of solvation -30.500 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.324 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.667 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.167 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.991 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds