Wall clock time and date at job start Tue Mar 31 2020 10:54:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 N 1.46505 * 109.47092 * 2 1 4 4 C 1.37097 * 119.99891 * 264.76731 * 3 2 1 5 5 H 1.07990 * 120.00102 * 138.84971 * 4 3 2 6 6 C 1.38955 * 120.00031 * 318.85455 * 4 3 2 7 7 N 1.31417 * 119.99739 * 341.83082 * 6 4 3 8 8 Si 1.86796 * 120.00139 * 161.83530 * 6 4 3 9 9 H 1.48493 * 109.47284 * 59.99402 * 8 6 4 10 10 H 1.48504 * 109.46918 * 179.97438 * 8 6 4 11 11 H 1.48500 * 109.46772 * 299.99202 * 8 6 4 12 12 C 1.34771 * 119.99875 * 84.76820 * 3 2 1 13 13 O 1.21297 * 119.99414 * 179.97438 * 12 3 2 14 14 C 1.50701 * 120.00305 * 359.97438 * 12 3 2 15 15 C 1.53004 * 109.46949 * 180.02562 * 14 12 3 16 16 O 1.42900 * 109.46534 * 180.02562 * 15 14 12 17 17 C 1.35977 * 116.99333 * 180.02562 * 16 15 14 18 18 C 1.38685 * 120.03793 * 0.24513 * 17 16 15 19 19 C 1.38155 * 119.97903 * 180.25412 * 18 17 16 20 20 C 1.38461 * 120.05620 * 359.49952 * 19 18 17 21 21 F 1.35098 * 119.96919 * 180.27564 * 20 19 18 22 22 C 1.38432 * 120.06674 * 0.25489 * 20 19 18 23 23 C 1.38259 * 120.01925 * 359.97438 * 22 20 19 24 24 Cl 1.73604 * 120.02954 * 180.02562 * 23 22 20 25 25 H 1.09000 * 109.46958 * 180.02562 * 1 2 3 26 26 H 1.09002 * 109.47273 * 300.00235 * 1 2 3 27 27 H 1.09005 * 109.46833 * 60.00114 * 1 2 3 28 28 H 1.09002 * 109.47273 * 239.99765 * 2 1 3 29 29 H 1.08999 * 109.47124 * 119.99569 * 2 1 3 30 30 H 0.97002 * 119.99778 * 180.02562 * 7 6 4 31 31 H 1.08997 * 109.47061 * 60.00176 * 14 12 3 32 32 H 1.08997 * 109.47107 * 300.00125 * 14 12 3 33 33 H 1.08997 * 109.47175 * 60.00147 * 15 14 12 34 34 H 1.09004 * 109.46877 * 299.99780 * 15 14 12 35 35 H 1.08003 * 120.00556 * 0.02562 * 18 17 16 36 36 H 1.08002 * 119.96914 * 179.77044 * 19 18 17 37 37 H 1.08005 * 119.99366 * 179.97438 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3813 0.0000 4 6 2.3489 1.9914 -1.1824 5 1 2.0743 3.0217 -1.3535 6 6 3.0372 1.2841 -2.1605 7 7 3.6791 0.1817 -1.8450 8 14 3.0502 1.9004 -3.9239 9 1 3.6538 3.2564 -3.9699 10 1 3.8493 0.9744 -4.7660 11 1 1.6581 1.9605 -4.4374 12 6 2.1426 2.0520 1.1623 13 8 2.5474 3.1955 1.1623 14 6 1.7787 1.3815 2.4619 15 6 2.0097 2.3545 3.6199 16 8 1.6652 1.7184 4.8523 17 6 1.8131 2.4517 5.9878 18 6 2.2752 3.7573 5.9158 19 6 2.4300 4.4995 7.0707 20 6 2.1144 3.9445 8.2993 21 9 2.2612 4.6737 9.4270 22 6 1.6482 2.6431 8.3732 23 6 1.4966 1.8961 7.2197 24 17 0.9113 0.2643 7.3120 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3634 0.5139 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 1.8934 -0.5139 -0.8900 29 1 1.8933 -0.5138 0.8900 30 1 4.1599 -0.3119 -2.5278 31 1 2.4001 0.4969 2.6008 32 1 0.7292 1.0883 2.4381 33 1 1.3880 3.2389 3.4809 34 1 3.0592 2.6481 3.6439 35 1 2.5174 4.1925 4.9574 36 1 2.7934 5.5151 7.0148 37 1 1.4028 2.2112 9.3322 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068232263.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:54:53 Heat of formation + Delta-G solvation = -99.331384 kcal Electronic energy + Delta-G solvation = -23253.169886 eV Core-core repulsion = 19357.528063 eV Total energy + Delta-G solvation = -3895.641823 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -49.08160 -40.32412 -38.72248 -37.48170 -36.51776 -35.08942 -32.36100 -31.50309 -31.16272 -29.50372 -29.22865 -25.69730 -24.14485 -22.98365 -22.40085 -21.85404 -18.99738 -18.46466 -17.67625 -17.00596 -16.79993 -16.29891 -15.80441 -15.74070 -15.16168 -14.98855 -14.55537 -14.32439 -14.17512 -13.98872 -13.57615 -13.23589 -12.94964 -12.81113 -12.67712 -12.18307 -11.90697 -11.68158 -11.57101 -11.30468 -11.19614 -11.08057 -11.05215 -10.86057 -10.65465 -10.41244 -10.35051 -10.12631 -9.30100 -8.97313 -8.54736 -8.27756 -7.50531 -6.38193 -4.07493 0.70874 0.88068 1.90255 2.94993 3.16058 3.17189 3.22189 3.25801 3.81087 4.03243 4.12243 4.39267 4.55556 4.76938 4.82812 4.95981 5.07275 5.18668 5.25366 5.31579 5.56143 5.60268 5.73606 5.81997 5.85016 5.89662 6.02434 6.14004 6.19534 6.33020 6.36488 6.49575 6.82715 7.16277 7.18563 7.52630 8.22092 8.42629 9.10799 9.31539 9.91509 10.66903 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.023749 B = 0.002802 C = 0.002575 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1178.691620 B = 9990.489668 C =10870.277412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.101 3.899 3 N -0.435 5.435 4 C -0.313 4.313 5 H 0.089 0.911 6 C 0.040 3.960 7 N -0.870 5.870 8 Si 0.920 3.080 9 H -0.272 1.272 10 H -0.284 1.284 11 H -0.273 1.273 12 C 0.465 3.535 13 O -0.585 6.585 14 C -0.134 4.134 15 C 0.075 3.925 16 O -0.302 6.302 17 C 0.144 3.856 18 C -0.169 4.169 19 C -0.104 4.104 20 C 0.064 3.936 21 F -0.137 7.137 22 C -0.109 4.109 23 C -0.050 4.050 24 Cl -0.045 7.045 25 H 0.051 0.949 26 H 0.043 0.957 27 H 0.057 0.943 28 H 0.104 0.896 29 H 0.050 0.950 30 H 0.269 0.731 31 H 0.093 0.907 32 H 0.090 0.910 33 H 0.072 0.928 34 H 0.074 0.926 35 H 0.154 0.846 36 H 0.144 0.856 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.965 0.724 16.300 17.054 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.224 4.224 2 C -0.023 4.023 3 N -0.154 5.154 4 C -0.440 4.440 5 H 0.106 0.894 6 C -0.165 4.165 7 N -0.507 5.507 8 Si 0.746 3.254 9 H -0.197 1.197 10 H -0.209 1.209 11 H -0.198 1.198 12 C 0.253 3.747 13 O -0.470 6.470 14 C -0.174 4.174 15 C 0.001 3.999 16 O -0.215 6.215 17 C 0.096 3.904 18 C -0.188 4.188 19 C -0.123 4.123 20 C 0.044 3.956 21 F -0.116 7.116 22 C -0.129 4.129 23 C -0.078 4.078 24 Cl -0.016 7.016 25 H 0.070 0.930 26 H 0.062 0.938 27 H 0.076 0.924 28 H 0.122 0.878 29 H 0.069 0.931 30 H 0.079 0.921 31 H 0.111 0.889 32 H 0.108 0.892 33 H 0.091 0.909 34 H 0.092 0.908 35 H 0.171 0.829 36 H 0.162 0.838 37 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -4.758 0.794 16.171 16.875 hybrid contribution 0.115 0.212 -0.724 0.763 sum -4.643 1.005 15.447 16.161 Atomic orbital electron populations 1.22222 0.98064 1.00529 1.01568 1.21507 0.91735 0.85444 1.03652 1.43407 1.55542 1.11787 1.04659 1.19340 1.35238 0.98640 0.90823 0.89376 1.25441 0.93917 0.96492 1.00630 1.69917 1.29143 1.17447 1.34214 0.86114 0.78423 0.78881 0.81979 1.19685 1.20934 1.19824 1.20000 0.82341 0.87892 0.84506 1.90528 1.50747 1.18764 1.86926 1.21531 1.03931 0.99503 0.92473 1.22673 1.01411 0.96119 0.79731 1.86129 1.81242 1.40861 1.13249 1.18724 0.94987 0.90310 0.86371 1.21285 1.04115 0.93118 1.00323 1.21069 0.99638 1.01246 0.90377 1.17278 1.05542 0.90155 0.82608 1.91504 1.93892 1.76776 1.49432 1.20764 1.01020 0.92708 0.98370 1.19836 1.07465 0.88888 0.91562 1.98383 1.86731 1.17982 1.98502 0.92961 0.93789 0.92380 0.87793 0.93120 0.92103 0.88913 0.89208 0.90927 0.90793 0.82854 0.83799 0.83271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.85 10.15 37.16 0.38 -2.47 16 2 C 0.10 2.09 5.41 -4.04 -0.02 2.07 16 3 N -0.44 -10.60 2.50 -114.81 -0.29 -10.89 16 4 C -0.31 -8.41 8.84 -14.93 -0.13 -8.54 16 5 H 0.09 2.47 7.82 -52.49 -0.41 2.06 16 6 C 0.04 1.04 4.95 -17.46 -0.09 0.95 16 7 N -0.87 -22.98 11.61 55.50 0.64 -22.34 16 8 Si 0.92 20.15 29.59 -169.99 -5.03 15.12 16 9 H -0.27 -6.02 7.11 56.52 0.40 -5.62 16 10 H -0.28 -6.11 7.11 56.52 0.40 -5.71 16 11 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 12 C 0.46 10.75 7.59 -10.99 -0.08 10.67 16 13 O -0.59 -15.35 15.89 5.54 0.09 -15.26 16 14 C -0.13 -2.35 4.68 -27.88 -0.13 -2.48 16 15 C 0.08 1.18 4.03 37.16 0.15 1.33 16 16 O -0.30 -4.41 9.60 -19.67 -0.19 -4.59 16 17 C 0.14 1.88 6.68 -39.21 -0.26 1.61 16 18 C -0.17 -1.96 9.04 -39.45 -0.36 -2.31 16 19 C -0.10 -1.06 10.02 -39.53 -0.40 -1.46 16 20 C 0.06 0.68 7.30 -39.43 -0.29 0.39 16 21 F -0.14 -1.48 17.27 2.25 0.04 -1.44 16 22 C -0.11 -1.13 9.80 -39.50 -0.39 -1.52 16 23 C -0.05 -0.60 6.33 -39.37 -0.25 -0.85 16 24 Cl -0.04 -0.53 28.50 -51.86 -1.48 -2.01 16 25 H 0.05 0.76 8.14 -51.93 -0.42 0.33 16 26 H 0.04 0.70 6.60 -51.93 -0.34 0.36 16 27 H 0.06 1.06 8.14 -51.93 -0.42 0.63 16 28 H 0.10 2.40 5.76 -51.93 -0.30 2.10 16 29 H 0.05 0.96 6.66 -51.93 -0.35 0.61 16 30 H 0.27 6.72 8.31 -40.82 -0.34 6.38 16 31 H 0.09 1.56 7.41 -51.93 -0.38 1.18 16 32 H 0.09 1.43 6.54 -51.93 -0.34 1.09 16 33 H 0.07 1.11 7.61 -51.93 -0.40 0.72 16 34 H 0.07 1.17 7.63 -51.93 -0.40 0.78 16 35 H 0.15 1.71 6.30 -52.48 -0.33 1.38 16 36 H 0.14 1.15 8.06 -52.49 -0.42 0.73 16 37 H 0.15 1.23 8.06 -52.48 -0.42 0.81 16 LS Contribution 334.12 15.07 5.04 5.04 Total: -1.00 -29.48 334.12 -7.11 -36.59 By element: Atomic # 1 Polarization: 6.47 SS G_CDS: -4.07 Total: 2.40 kcal Atomic # 6 Polarization: -0.74 SS G_CDS: -1.87 Total: -2.61 kcal Atomic # 7 Polarization: -33.58 SS G_CDS: 0.36 Total: -33.23 kcal Atomic # 8 Polarization: -19.76 SS G_CDS: -0.10 Total: -19.86 kcal Atomic # 9 Polarization: -1.48 SS G_CDS: 0.04 Total: -1.44 kcal Atomic # 14 Polarization: 20.15 SS G_CDS: -5.03 Total: 15.12 kcal Atomic # 17 Polarization: -0.53 SS G_CDS: -1.48 Total: -2.01 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -29.48 -7.11 -36.59 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068232263.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.742 kcal (2) G-P(sol) polarization free energy of solvation -29.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.218 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.590 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.331 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds