Wall clock time and date at job start Tue Mar 31 2020 10:52:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 H 1.08999 * 109.47069 * 2 1 4 4 O 1.42894 * 109.47661 * 239.99197 * 2 1 3 5 5 C 1.35977 * 116.99771 * 84.84724 * 4 2 1 6 6 C 1.38684 * 120.03256 * 354.58627 * 5 4 2 7 7 C 1.38163 * 119.97829 * 180.25316 * 6 5 4 8 8 C 1.38463 * 120.05123 * 359.46862 * 7 6 5 9 9 F 1.35104 * 119.96513 * 180.25330 * 8 7 6 10 10 C 1.38439 * 120.07205 * 0.28086 * 8 7 6 11 11 C 1.38260 * 120.01296 * 359.96929 * 10 8 7 12 12 Cl 1.73599 * 120.02639 * 180.02562 * 11 10 8 13 13 C 1.50707 * 109.47030 * 119.98998 * 2 1 3 14 14 O 1.21284 * 119.99434 * 120.00101 * 13 2 1 15 15 N 1.34770 * 120.00283 * 300.00742 * 13 2 1 16 16 C 1.46505 * 119.99923 * 359.97438 * 15 13 2 17 17 C 1.46500 * 120.00010 * 179.97438 * 15 13 2 18 18 C 1.50694 * 109.47125 * 89.99880 * 17 15 13 19 19 H 1.07998 * 120.00285 * 359.97438 * 18 17 15 20 20 C 1.37883 * 119.99851 * 180.02562 * 18 17 15 21 21 N 1.31514 * 119.99999 * 179.97438 * 20 18 17 22 22 Si 1.86802 * 119.99885 * 359.97438 * 20 18 17 23 23 H 1.48496 * 109.46707 * 90.00403 * 22 20 18 24 24 H 1.48506 * 109.46938 * 209.99945 * 22 20 18 25 25 H 1.48493 * 109.47419 * 330.00046 * 22 20 18 26 26 H 1.08993 * 109.47538 * 300.00371 * 1 2 3 27 27 H 1.09001 * 109.47208 * 60.00727 * 1 2 3 28 28 H 1.09009 * 109.46960 * 180.02562 * 1 2 3 29 29 H 1.07994 * 120.01198 * 0.02562 * 6 5 4 30 30 H 1.07997 * 119.97246 * 179.74618 * 7 6 5 31 31 H 1.07991 * 119.99365 * 180.02562 * 10 8 7 32 32 H 1.09000 * 109.47061 * 90.00108 * 16 15 13 33 33 H 1.09001 * 109.46770 * 210.00036 * 16 15 13 34 34 H 1.09000 * 109.46895 * 330.00009 * 16 15 13 35 35 H 1.09009 * 109.46813 * 209.99709 * 17 15 13 36 36 H 1.09001 * 109.46999 * 329.99134 * 17 15 13 37 37 H 0.96996 * 120.00391 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 8 2.0064 -0.6737 -1.1666 5 6 2.1096 0.0620 -2.3054 6 6 1.6549 1.3720 -2.3291 7 6 1.7556 2.1168 -3.4884 8 6 2.3201 1.5601 -4.6235 9 9 2.4224 2.2917 -5.7547 10 6 2.7795 0.2543 -4.6007 11 6 2.6755 -0.4953 -3.4437 12 17 3.2519 -2.1326 -3.4146 13 6 2.0323 -0.7102 1.2307 14 8 2.7296 -1.6963 1.1194 15 7 1.7066 -0.2497 2.4546 16 6 0.8647 0.9417 2.5889 17 6 2.1945 -0.9405 3.6509 18 6 3.5221 -0.3574 4.0613 19 1 3.9590 0.4469 3.4882 20 6 4.1795 -0.8516 5.1680 21 7 5.3384 -0.3431 5.5259 22 14 3.4242 -2.2434 6.1589 23 1 3.8835 -3.5457 5.6129 24 1 3.8450 -2.1256 7.5782 25 1 1.9437 -2.1652 6.0734 26 1 -0.3634 0.5138 0.8899 27 1 -0.3634 0.5137 -0.8900 28 1 -0.3633 -1.0278 0.0005 29 1 1.2189 1.8085 -1.4428 30 1 1.3977 3.1356 -3.5079 31 1 3.2200 -0.1786 -5.4866 32 1 -0.1834 0.6441 2.6220 33 1 1.1225 1.4670 3.5085 34 1 1.0286 1.6004 1.7360 35 1 1.4763 -0.8148 4.4613 36 1 2.3152 -2.0018 3.4338 37 1 5.8008 -0.6905 6.3046 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068934584.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:52:51 Heat of formation + Delta-G solvation = -80.422361 kcal Electronic energy + Delta-G solvation = -23784.724479 eV Core-core repulsion = 19889.902613 eV Total energy + Delta-G solvation = -3894.821866 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -49.12773 -40.77491 -39.17357 -37.40505 -36.47199 -35.14119 -32.95815 -31.95997 -31.20127 -29.54488 -28.32055 -26.43497 -24.59707 -23.65704 -22.85128 -21.73659 -19.00202 -18.80703 -17.68350 -17.19527 -17.01054 -16.21858 -16.01929 -15.63106 -15.59447 -15.09437 -14.75821 -14.66260 -14.15641 -13.82716 -13.70439 -13.50883 -13.20063 -12.86373 -12.58340 -12.45644 -12.43280 -12.02358 -11.83588 -11.58237 -11.44680 -11.24213 -11.09291 -10.97825 -10.93946 -10.57432 -10.20288 -9.60446 -9.35133 -9.11111 -8.63635 -8.32870 -7.85894 -6.13401 -4.13234 0.64776 0.80791 1.94327 2.62822 3.07625 3.13604 3.26222 3.31939 3.34492 3.78217 3.97589 4.30715 4.35294 4.40044 4.57378 4.72098 4.78476 4.85305 4.95917 5.18571 5.19931 5.33450 5.42955 5.44245 5.52327 5.65970 5.69459 5.73272 5.86988 6.06533 6.26271 6.56539 6.83579 7.01088 7.19689 7.53777 8.03849 8.39713 8.76871 8.89413 9.45885 10.99831 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.020309 B = 0.003300 C = 0.003130 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1378.337285 B = 8481.629682 C = 8943.496328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 C 0.063 3.937 3 H 0.098 0.902 4 O -0.266 6.266 5 C 0.140 3.860 6 C -0.176 4.176 7 C -0.105 4.105 8 C 0.066 3.934 9 F -0.136 7.136 10 C -0.107 4.107 11 C -0.045 4.045 12 Cl -0.036 7.036 13 C 0.512 3.488 14 O -0.511 6.511 15 N -0.592 5.592 16 C 0.077 3.923 17 C 0.218 3.782 18 C -0.533 4.533 19 H 0.075 0.925 20 C 0.074 3.926 21 N -0.895 5.895 22 Si 0.876 3.124 23 H -0.273 1.273 24 H -0.284 1.284 25 H -0.266 1.266 26 H 0.093 0.907 27 H 0.070 0.930 28 H 0.075 0.925 29 H 0.150 0.850 30 H 0.145 0.855 31 H 0.151 0.849 32 H 0.053 0.947 33 H 0.081 0.919 34 H 0.059 0.941 35 H 0.034 0.966 36 H 0.038 0.962 37 H 0.265 0.735 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.288 5.671 -17.727 22.303 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.245 4.245 2 C 0.004 3.996 3 H 0.115 0.885 4 O -0.177 6.177 5 C 0.093 3.907 6 C -0.194 4.194 7 C -0.124 4.124 8 C 0.047 3.953 9 F -0.115 7.115 10 C -0.126 4.126 11 C -0.073 4.073 12 Cl -0.007 7.007 13 C 0.296 3.704 14 O -0.385 6.385 15 N -0.326 5.326 16 C -0.067 4.067 17 C 0.098 3.902 18 C -0.572 4.572 19 H 0.093 0.907 20 C -0.129 4.129 21 N -0.533 5.533 22 Si 0.703 3.297 23 H -0.198 1.198 24 H -0.210 1.210 25 H -0.190 1.190 26 H 0.111 0.889 27 H 0.089 0.911 28 H 0.094 0.906 29 H 0.168 0.832 30 H 0.162 0.838 31 H 0.169 0.831 32 H 0.071 0.929 33 H 0.099 0.901 34 H 0.078 0.922 35 H 0.052 0.948 36 H 0.056 0.944 37 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges -11.658 4.774 -17.614 21.656 hybrid contribution -0.185 -0.332 0.457 0.594 sum -11.842 4.442 -17.157 21.315 Atomic orbital electron populations 1.22607 0.92840 1.04806 1.04267 1.22411 0.95652 0.97232 0.84343 0.88479 1.86351 1.80085 1.36117 1.15174 1.18806 0.94685 0.90418 0.86839 1.21170 1.05303 0.93091 0.99883 1.21017 0.99085 1.01087 0.91196 1.17279 1.04512 0.89993 0.83562 1.91512 1.94504 1.76625 1.48865 1.20815 1.01199 0.92637 0.97991 1.19873 1.04849 0.89423 0.93120 1.98412 1.86933 1.16719 1.98603 1.19665 0.81605 0.85474 0.83635 1.90739 1.36263 1.25853 1.85682 1.47714 1.50230 1.28522 1.06094 1.21896 0.93775 0.87826 1.03210 1.19720 0.95485 0.93748 0.81274 1.21302 1.03123 1.20542 1.12195 0.90728 1.24855 0.94603 0.96436 0.97031 1.69889 1.14699 1.42238 1.26512 0.86849 0.80000 0.83294 0.79540 1.19814 1.21002 1.19029 0.88878 0.91107 0.90594 0.83248 0.83765 0.83098 0.92901 0.90066 0.92223 0.94833 0.94360 0.92464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.19 -1.93 8.80 37.16 0.33 -1.60 16 2 C 0.06 0.90 1.84 -27.88 -0.05 0.85 16 3 H 0.10 1.16 5.58 -51.93 -0.29 0.87 16 4 O -0.27 -4.21 8.79 -39.58 -0.35 -4.56 16 5 C 0.14 1.83 6.59 -39.21 -0.26 1.57 16 6 C -0.18 -1.74 8.24 -39.44 -0.32 -2.07 16 7 C -0.10 -0.93 10.02 -39.53 -0.40 -1.33 16 8 C 0.07 0.66 7.30 -39.42 -0.29 0.38 16 9 F -0.14 -1.40 17.27 2.25 0.04 -1.36 16 10 C -0.11 -1.12 9.81 -39.50 -0.39 -1.50 16 11 C -0.04 -0.57 6.33 -39.37 -0.25 -0.82 16 12 Cl -0.04 -0.49 28.50 -51.86 -1.48 -1.97 16 13 C 0.51 10.19 7.15 -10.98 -0.08 10.11 16 14 O -0.51 -12.81 16.08 -14.36 -0.23 -13.04 16 15 N -0.59 -11.46 2.86 -182.95 -0.52 -11.98 16 16 C 0.08 1.02 8.80 59.85 0.53 1.55 16 17 C 0.22 5.14 4.23 -5.20 -0.02 5.12 16 18 C -0.53 -15.01 9.94 -34.44 -0.34 -15.35 16 19 H 0.07 2.30 8.06 -52.49 -0.42 1.88 16 20 C 0.07 2.11 5.47 -17.82 -0.10 2.02 16 21 N -0.90 -27.30 13.96 55.43 0.77 -26.53 16 22 Si 0.88 21.20 27.47 -169.99 -4.67 16.53 16 23 H -0.27 -6.68 7.11 56.52 0.40 -6.28 16 24 H -0.28 -6.75 7.11 56.52 0.40 -6.35 16 25 H -0.27 -5.98 6.54 56.52 0.37 -5.61 16 26 H 0.09 0.80 4.53 -51.93 -0.24 0.56 16 27 H 0.07 0.56 6.90 -51.93 -0.36 0.21 16 28 H 0.08 0.86 8.14 -51.92 -0.42 0.44 16 29 H 0.15 1.16 5.42 -52.49 -0.28 0.87 16 30 H 0.14 0.90 8.06 -52.49 -0.42 0.48 16 31 H 0.15 1.28 8.06 -52.49 -0.42 0.86 16 32 H 0.05 0.55 6.95 -51.93 -0.36 0.19 16 33 H 0.08 1.14 8.07 -51.93 -0.42 0.72 16 34 H 0.06 0.62 6.01 -51.93 -0.31 0.30 16 35 H 0.03 0.74 7.13 -51.92 -0.37 0.37 16 36 H 0.04 0.98 6.85 -51.93 -0.36 0.62 16 37 H 0.27 7.56 8.31 -40.82 -0.34 7.22 16 LS Contribution 328.26 15.07 4.95 4.95 Total: -1.00 -34.70 328.26 -6.97 -41.68 By element: Atomic # 1 Polarization: 1.19 SS G_CDS: -3.84 Total: -2.65 kcal Atomic # 6 Polarization: 0.57 SS G_CDS: -1.64 Total: -1.07 kcal Atomic # 7 Polarization: -38.76 SS G_CDS: 0.25 Total: -38.51 kcal Atomic # 8 Polarization: -17.02 SS G_CDS: -0.58 Total: -17.59 kcal Atomic # 9 Polarization: -1.40 SS G_CDS: 0.04 Total: -1.36 kcal Atomic # 14 Polarization: 21.20 SS G_CDS: -4.67 Total: 16.53 kcal Atomic # 17 Polarization: -0.49 SS G_CDS: -1.48 Total: -1.97 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -34.70 -6.97 -41.68 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068934584.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.745 kcal (2) G-P(sol) polarization free energy of solvation -34.703 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.448 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -80.422 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds