Wall clock time and date at job start Tue Mar 31 2020 10:52:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 H 1.08991 * 109.46853 * 2 1 4 4 O 1.42899 * 109.46686 * 119.99308 * 2 1 3 5 5 C 1.35972 * 117.00605 * 276.85868 * 4 2 1 6 6 C 1.38684 * 120.02660 * 356.50105 * 5 4 2 7 7 C 1.38166 * 119.97873 * 180.22817 * 6 5 4 8 8 C 1.38470 * 120.04983 * 359.49600 * 7 6 5 9 9 F 1.35097 * 119.96617 * 180.22748 * 8 7 6 10 10 C 1.38440 * 120.06597 * 0.50565 * 8 7 6 11 11 C 1.38257 * 120.01765 * 359.74439 * 10 8 7 12 12 Cl 1.73603 * 120.02613 * 179.97438 * 11 10 8 13 13 C 1.50697 * 109.47217 * 239.99522 * 2 1 3 14 14 O 1.21286 * 119.99624 * 254.74151 * 13 2 1 15 15 N 1.34771 * 120.00132 * 74.74307 * 13 2 1 16 16 C 1.46502 * 119.99888 * 4.90600 * 15 13 2 17 17 C 1.46496 * 120.00356 * 184.90090 * 15 13 2 18 18 C 1.50707 * 109.46930 * 90.00039 * 17 15 13 19 19 H 1.08002 * 120.00073 * 0.02562 * 18 17 15 20 20 C 1.37873 * 119.99826 * 180.02562 * 18 17 15 21 21 N 1.31512 * 120.00326 * 359.97438 * 20 18 17 22 22 Si 1.86803 * 119.99732 * 180.02562 * 20 18 17 23 23 H 1.48498 * 109.47398 * 89.99806 * 22 20 18 24 24 H 1.48506 * 109.47008 * 210.00208 * 22 20 18 25 25 H 1.48502 * 109.47207 * 329.99487 * 22 20 18 26 26 H 1.08994 * 109.47462 * 295.40587 * 1 2 3 27 27 H 1.08999 * 109.47237 * 55.41124 * 1 2 3 28 28 H 1.09009 * 109.46957 * 175.41071 * 1 2 3 29 29 H 1.07998 * 120.01448 * 359.95427 * 6 5 4 30 30 H 1.08001 * 119.97317 * 179.74328 * 7 6 5 31 31 H 1.08004 * 119.98853 * 179.77335 * 10 8 7 32 32 H 1.09001 * 109.47549 * 94.37904 * 16 15 13 33 33 H 1.09000 * 109.47156 * 214.37794 * 16 15 13 34 34 H 1.09007 * 109.47109 * 334.37764 * 16 15 13 35 35 H 1.08995 * 109.47887 * 210.00304 * 17 15 13 36 36 H 1.09005 * 109.47245 * 330.00819 * 17 15 13 37 37 H 0.97002 * 120.00401 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 8 2.0063 -0.6735 1.1669 5 6 2.0756 0.0531 2.3141 6 6 1.7625 1.4040 2.2999 7 6 1.8379 2.1425 3.4652 8 6 2.2158 1.5324 4.6495 9 9 2.2844 2.2551 5.7888 10 6 2.5288 0.1840 4.6659 11 6 2.4593 -0.5565 3.5004 12 17 2.8525 -2.2473 3.5206 13 6 2.0324 -0.7105 -1.2304 14 8 2.4952 -1.8279 -1.1389 15 7 1.9675 -0.1043 -2.4323 16 6 1.5091 1.2838 -2.5288 17 6 2.3553 -0.8333 -3.6423 18 6 1.1505 -1.5360 -4.2133 19 1 0.1917 -1.4479 -3.7240 20 6 1.2723 -2.2913 -5.3603 21 7 2.4396 -2.3982 -5.9565 22 14 -0.2213 -3.1616 -6.0684 23 1 -0.9081 -2.2629 -7.0305 24 1 0.2117 -4.3978 -6.7681 25 1 -1.1548 -3.5163 -4.9693 26 1 -0.3634 0.4409 0.9282 27 1 -0.3634 0.5834 -0.8460 28 1 -0.3633 -1.0245 -0.0822 29 1 1.4641 1.8798 1.3774 30 1 1.5980 3.1955 3.4532 31 1 2.8269 -0.2898 5.5896 32 1 2.3700 1.9524 -2.5180 33 1 0.9551 1.4198 -3.4576 34 1 0.8612 1.5122 -1.6825 35 1 2.7498 -0.1326 -4.3781 36 1 3.1208 -1.5686 -3.3939 37 1 2.5254 -2.9298 -6.7633 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068934587.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:52:53 Heat of formation + Delta-G solvation = -87.609447 kcal Electronic energy + Delta-G solvation = -23727.807985 eV Core-core repulsion = 19832.674463 eV Total energy + Delta-G solvation = -3895.133521 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -49.14848 -40.75177 -39.07487 -37.38086 -36.48781 -34.96489 -32.92545 -31.93124 -31.20209 -29.50830 -27.84180 -26.15280 -24.68263 -23.70502 -22.96270 -21.86917 -18.94341 -18.81293 -17.66194 -17.14693 -16.59120 -16.20392 -16.05358 -15.69072 -15.35436 -15.10006 -14.76864 -14.52266 -14.34467 -13.89186 -13.61299 -13.48675 -13.03156 -12.81357 -12.49574 -12.36230 -12.13489 -11.95046 -11.80132 -11.57136 -11.30280 -11.27342 -11.03444 -10.98120 -10.87798 -10.62827 -10.21234 -9.70434 -9.36494 -9.01116 -8.49120 -8.33235 -7.78165 -6.09968 -4.15557 0.62823 0.79479 1.92766 2.66436 3.07260 3.17111 3.26598 3.34134 3.38374 3.87983 3.97327 4.29383 4.38039 4.42450 4.56911 4.79784 4.81513 4.89457 4.98428 5.19353 5.24832 5.32427 5.50072 5.51738 5.58628 5.69025 5.72838 5.77614 6.01999 6.14211 6.25144 6.86052 7.08208 7.35410 7.42302 7.85615 8.14990 8.23000 8.79186 8.93913 9.49832 10.98175 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.023530 B = 0.003137 C = 0.002939 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1189.709821 B = 8923.944534 C = 9526.210286 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C 0.062 3.938 3 H 0.092 0.908 4 O -0.266 6.266 5 C 0.141 3.859 6 C -0.177 4.177 7 C -0.104 4.104 8 C 0.065 3.935 9 F -0.137 7.137 10 C -0.106 4.106 11 C -0.047 4.047 12 Cl -0.036 7.036 13 C 0.512 3.488 14 O -0.514 6.514 15 N -0.596 5.596 16 C 0.072 3.928 17 C 0.246 3.754 18 C -0.531 4.531 19 H 0.058 0.942 20 C 0.062 3.938 21 N -0.893 5.893 22 Si 0.899 3.101 23 H -0.280 1.280 24 H -0.285 1.285 25 H -0.274 1.274 26 H 0.069 0.931 27 H 0.086 0.914 28 H 0.078 0.922 29 H 0.150 0.850 30 H 0.144 0.856 31 H 0.151 0.849 32 H 0.049 0.951 33 H 0.078 0.922 34 H 0.059 0.941 35 H 0.036 0.964 36 H 0.047 0.953 37 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.495 11.850 18.796 22.360 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.002 3.998 3 H 0.110 0.890 4 O -0.177 6.177 5 C 0.093 3.907 6 C -0.196 4.196 7 C -0.123 4.123 8 C 0.045 3.955 9 F -0.115 7.115 10 C -0.126 4.126 11 C -0.074 4.074 12 Cl -0.007 7.007 13 C 0.295 3.705 14 O -0.388 6.388 15 N -0.330 5.330 16 C -0.071 4.071 17 C 0.128 3.872 18 C -0.570 4.570 19 H 0.076 0.924 20 C -0.140 4.140 21 N -0.532 5.532 22 Si 0.726 3.274 23 H -0.206 1.206 24 H -0.210 1.210 25 H -0.198 1.198 26 H 0.088 0.912 27 H 0.104 0.896 28 H 0.097 0.903 29 H 0.168 0.832 30 H 0.162 0.838 31 H 0.169 0.831 32 H 0.067 0.933 33 H 0.097 0.903 34 H 0.078 0.922 35 H 0.054 0.946 36 H 0.065 0.935 37 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -2.051 10.809 18.650 21.653 hybrid contribution -0.862 -0.190 -0.366 0.956 sum -2.914 10.619 18.284 21.344 Atomic orbital electron populations 1.22344 0.92502 1.05085 1.03347 1.22517 0.96032 0.96905 0.84362 0.89035 1.86386 1.79471 1.37189 1.14675 1.18825 0.95123 0.90186 0.86575 1.21151 1.06222 0.92370 0.99850 1.21017 0.99444 1.01138 0.90708 1.17277 1.06067 0.89373 0.82773 1.91509 1.94423 1.77277 1.48323 1.20814 1.01295 0.92376 0.98101 1.19867 1.07706 0.87905 0.91954 1.98413 1.92193 1.11394 1.98686 1.19618 0.80459 0.86799 0.83588 1.90730 1.44135 1.18758 1.85218 1.48060 1.64576 1.12854 1.07534 1.21851 0.99108 0.83153 1.03031 1.19355 0.96682 0.91997 0.79195 1.21414 0.95340 1.30676 1.09525 0.92354 1.24936 0.96212 0.96182 0.96699 1.69926 1.23139 1.40443 1.19653 0.86487 0.82637 0.79191 0.79056 1.20604 1.21026 1.19842 0.91195 0.89556 0.90254 0.83247 0.83790 0.83122 0.93295 0.90331 0.92200 0.94634 0.93543 0.92603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.14 8.96 37.16 0.33 -1.81 16 2 C 0.06 0.90 1.81 -27.88 -0.05 0.85 16 3 H 0.09 1.02 5.07 -51.93 -0.26 0.76 16 4 O -0.27 -4.23 8.84 -39.12 -0.35 -4.58 16 5 C 0.14 1.80 6.50 -39.21 -0.25 1.54 16 6 C -0.18 -1.70 8.35 -39.44 -0.33 -2.03 16 7 C -0.10 -0.88 10.02 -39.52 -0.40 -1.28 16 8 C 0.06 0.62 7.30 -39.42 -0.29 0.34 16 9 F -0.14 -1.35 17.27 2.25 0.04 -1.32 16 10 C -0.11 -1.07 9.80 -39.50 -0.39 -1.46 16 11 C -0.05 -0.57 6.33 -39.37 -0.25 -0.82 16 12 Cl -0.04 -0.48 28.50 -51.86 -1.48 -1.96 16 13 C 0.51 10.45 6.97 -10.99 -0.08 10.37 16 14 O -0.51 -13.17 16.12 -13.91 -0.22 -13.40 16 15 N -0.60 -12.01 2.86 -182.95 -0.52 -12.53 16 16 C 0.07 1.02 9.99 59.85 0.60 1.62 16 17 C 0.25 6.26 5.22 -5.19 -0.03 6.23 16 18 C -0.53 -14.62 9.39 -34.44 -0.32 -14.94 16 19 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 20 C 0.06 1.74 5.46 -17.82 -0.10 1.65 16 21 N -0.89 -26.14 13.29 55.43 0.74 -25.40 16 22 Si 0.90 21.44 29.54 -169.99 -5.02 16.41 16 23 H -0.28 -6.46 7.11 56.52 0.40 -6.05 16 24 H -0.28 -6.78 7.11 56.52 0.40 -6.37 16 25 H -0.27 -6.50 7.11 56.52 0.40 -6.10 16 26 H 0.07 0.67 7.36 -51.93 -0.38 0.29 16 27 H 0.09 0.94 6.21 -51.93 -0.32 0.61 16 28 H 0.08 1.14 8.14 -51.92 -0.42 0.72 16 29 H 0.15 1.12 5.73 -52.49 -0.30 0.82 16 30 H 0.14 0.85 8.06 -52.49 -0.42 0.43 16 31 H 0.15 1.23 8.06 -52.48 -0.42 0.80 16 32 H 0.05 0.59 8.14 -51.93 -0.42 0.17 16 33 H 0.08 1.14 8.10 -51.93 -0.42 0.72 16 34 H 0.06 0.63 4.45 -51.92 -0.23 0.40 16 35 H 0.04 0.91 8.07 -51.93 -0.42 0.49 16 36 H 0.05 1.35 7.36 -51.93 -0.38 0.97 16 37 H 0.26 7.30 8.31 -40.82 -0.34 6.97 16 LS Contribution 334.71 15.07 5.04 5.04 Total: -1.00 -33.41 334.71 -7.28 -40.69 By element: Atomic # 1 Polarization: 0.75 SS G_CDS: -3.96 Total: -3.21 kcal Atomic # 6 Polarization: 1.80 SS G_CDS: -1.55 Total: 0.25 kcal Atomic # 7 Polarization: -38.15 SS G_CDS: 0.21 Total: -37.94 kcal Atomic # 8 Polarization: -17.41 SS G_CDS: -0.57 Total: -17.98 kcal Atomic # 9 Polarization: -1.35 SS G_CDS: 0.04 Total: -1.32 kcal Atomic # 14 Polarization: 21.44 SS G_CDS: -5.02 Total: 16.41 kcal Atomic # 17 Polarization: -0.48 SS G_CDS: -1.48 Total: -1.96 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -33.41 -7.28 -40.69 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068934587.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -46.916 kcal (2) G-P(sol) polarization free energy of solvation -33.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.330 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.694 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.609 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds