Wall clock time and date at job start Tue Mar 31 2020 11:03:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42894 * 114.00053 * 2 1 4 4 C 1.53001 * 109.47573 * 179.97438 * 3 2 1 5 5 N 1.46503 * 109.46907 * 65.00250 * 4 3 2 6 6 C 1.46503 * 119.99942 * 274.87405 * 5 4 3 7 7 C 1.50707 * 109.46701 * 269.99722 * 6 5 4 8 8 H 1.07997 * 119.99842 * 0.02562 * 7 6 5 9 9 C 1.37872 * 119.99751 * 179.97438 * 7 6 5 10 10 N 1.31521 * 120.00408 * 0.02562 * 9 7 6 11 11 Si 1.86800 * 119.99988 * 179.97438 * 9 7 6 12 12 H 1.48502 * 109.47015 * 60.00552 * 11 9 7 13 13 H 1.48504 * 109.47396 * 180.02562 * 11 9 7 14 14 H 1.48498 * 109.47127 * 300.00333 * 11 9 7 15 15 C 1.34774 * 120.00352 * 94.86794 * 5 4 3 16 16 O 1.21576 * 120.00327 * 185.57833 * 15 5 4 17 17 C 1.47630 * 119.99877 * 5.57764 * 15 5 4 18 18 C 1.39699 * 120.15035 * 55.01907 * 17 15 5 19 19 C 1.37804 * 119.89083 * 180.27143 * 18 17 15 20 20 C 1.38609 * 120.20185 * 0.02562 * 19 18 17 21 21 Cl 1.73601 * 119.84282 * 180.02562 * 20 19 18 22 22 C 1.38351 * 120.31400 * 0.02562 * 20 19 18 23 23 C 1.38255 * 120.10654 * 359.97438 * 22 20 19 24 24 F 1.35102 * 120.10424 * 179.97438 * 23 22 20 25 25 H 1.08996 * 109.47712 * 299.99557 * 1 2 3 26 26 H 1.09002 * 109.47225 * 60.00266 * 1 2 3 27 27 H 1.09005 * 109.47293 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47521 * 59.99852 * 3 2 1 29 29 H 1.09006 * 109.47383 * 300.00332 * 3 2 1 30 30 H 1.08995 * 109.46975 * 305.00460 * 4 3 2 31 31 H 1.09003 * 109.47579 * 184.99855 * 4 3 2 32 32 H 1.08996 * 109.47217 * 29.99328 * 6 5 4 33 33 H 1.08997 * 109.47508 * 149.99709 * 6 5 4 34 34 H 0.96998 * 120.00267 * 179.97438 * 10 9 7 35 35 H 1.08002 * 120.05607 * 0.26029 * 18 17 15 36 36 H 1.07996 * 119.89449 * 180.02562 * 19 18 17 37 37 H 1.08000 * 119.94528 * 180.02562 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3054 0.0000 4 6 3.5354 1.1847 0.0006 5 7 3.9766 0.5641 -1.2509 6 6 4.0041 -0.8954 -1.3749 7 6 5.3511 -1.4113 -0.9383 8 1 6.1105 -0.7211 -0.6017 9 6 5.6136 -2.7645 -0.9675 10 7 4.6887 -3.6051 -1.3770 11 14 7.2834 -3.4039 -0.4270 12 1 7.5254 -3.0221 0.9876 13 1 7.3114 -4.8834 -0.5525 14 1 8.3411 -2.8146 -1.2867 15 6 4.3571 1.3357 -2.2883 16 8 4.6260 0.8259 -3.3588 17 6 4.4474 2.8002 -2.1248 18 6 5.2341 3.3454 -1.1073 19 6 5.3100 4.7130 -0.9560 20 6 4.6079 5.5491 -1.8100 21 17 4.7109 7.2706 -1.6114 22 6 3.8255 5.0181 -2.8199 23 6 3.7400 3.6479 -2.9834 24 9 2.9755 3.1294 -3.9692 25 1 -0.3634 0.5137 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 1.6885 1.8464 0.8899 29 1 1.6885 1.8464 -0.8900 30 1 3.8507 0.5685 0.8426 31 1 3.9784 2.1766 0.0902 32 1 3.2275 -1.3283 -0.7445 33 1 3.8271 -1.1753 -2.4134 34 1 4.8735 -4.5571 -1.3979 35 1 5.7816 2.6962 -0.4401 36 1 5.9185 5.1346 -0.1697 37 1 3.2813 5.6751 -3.4822 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000071140987.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:29 Heat of formation + Delta-G solvation = -97.490130 kcal Electronic energy + Delta-G solvation = -24366.772388 eV Core-core repulsion = 20471.210408 eV Total energy + Delta-G solvation = -3895.561980 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.96007 -39.98635 -38.39123 -37.47773 -36.66804 -34.92405 -32.74722 -31.35370 -30.74765 -29.61083 -27.16663 -25.96455 -24.22846 -23.32235 -22.59982 -22.17409 -19.26645 -17.78614 -17.16616 -16.80491 -16.37664 -16.31171 -15.79022 -15.66872 -15.32129 -15.11778 -14.76296 -14.38747 -14.24332 -13.89295 -13.51452 -13.43553 -13.11748 -12.63993 -12.24221 -12.17432 -11.91644 -11.69827 -11.65583 -11.40446 -11.27888 -11.25694 -10.90885 -10.87686 -10.41202 -10.15502 -9.63827 -9.44768 -9.27781 -9.13247 -8.84144 -8.37032 -7.70790 -5.99141 -4.04186 0.55645 0.84464 1.69493 2.93728 3.33686 3.38438 3.39431 3.41114 3.73389 4.04185 4.06223 4.44576 4.46693 4.66496 4.70792 4.92282 5.21429 5.28922 5.34942 5.37745 5.44575 5.51883 5.55957 5.61048 5.67102 5.70415 5.82296 5.88217 5.92114 6.17372 6.40765 7.17321 7.39890 7.50236 7.59459 7.97564 8.27688 8.34093 8.82066 9.01816 9.59526 11.08880 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.013695 B = 0.004268 C = 0.003759 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2043.987565 B = 6558.330908 C = 7447.390010 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.369 6.369 3 C 0.046 3.954 4 C 0.102 3.898 5 N -0.577 5.577 6 C 0.247 3.753 7 C -0.530 4.530 8 H 0.055 0.945 9 C 0.063 3.937 10 N -0.891 5.891 11 Si 0.896 3.104 12 H -0.277 1.277 13 H -0.286 1.286 14 H -0.277 1.277 15 C 0.545 3.455 16 O -0.521 6.521 17 C -0.140 4.140 18 C -0.052 4.052 19 C -0.124 4.124 20 C 0.000 4.000 21 Cl -0.059 7.059 22 C -0.153 4.153 23 C 0.152 3.848 24 F -0.118 7.118 25 H 0.035 0.965 26 H 0.035 0.965 27 H 0.085 0.915 28 H 0.052 0.948 29 H 0.043 0.957 30 H 0.095 0.905 31 H 0.087 0.913 32 H 0.053 0.947 33 H 0.041 0.959 34 H 0.263 0.737 35 H 0.153 0.847 36 H 0.146 0.854 37 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.824 19.412 4.471 20.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.287 6.287 3 C -0.032 4.032 4 C -0.022 4.022 5 N -0.307 5.307 6 C 0.129 3.871 7 C -0.569 4.569 8 H 0.074 0.926 9 C -0.139 4.139 10 N -0.530 5.530 11 Si 0.724 3.276 12 H -0.203 1.203 13 H -0.212 1.212 14 H -0.203 1.203 15 C 0.330 3.670 16 O -0.398 6.398 17 C -0.145 4.145 18 C -0.071 4.071 19 C -0.143 4.143 20 C -0.027 4.027 21 Cl -0.030 7.030 22 C -0.172 4.172 23 C 0.131 3.869 24 F -0.096 7.096 25 H 0.053 0.947 26 H 0.054 0.946 27 H 0.103 0.897 28 H 0.070 0.930 29 H 0.061 0.939 30 H 0.113 0.887 31 H 0.104 0.896 32 H 0.071 0.929 33 H 0.060 0.940 34 H 0.073 0.927 35 H 0.171 0.829 36 H 0.163 0.837 37 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -4.641 18.841 3.851 19.783 hybrid contribution 0.523 -0.032 0.143 0.543 sum -4.117 18.809 3.995 19.664 Atomic orbital electron populations 1.22705 0.82005 1.02665 0.99106 1.88111 1.18787 1.26706 1.95130 1.23042 0.95045 0.85580 0.99544 1.21778 0.91739 0.99332 0.89401 1.48148 1.61858 1.09647 1.11066 1.19437 0.97451 0.71005 0.99205 1.21394 0.98984 0.92111 1.44404 0.92641 1.24904 0.97026 0.96698 0.95291 1.69936 1.33364 1.02909 1.46773 0.86593 0.84317 0.77701 0.78973 1.20266 1.21200 1.20265 1.17858 0.79400 0.84676 0.85087 1.90812 1.49145 1.73892 1.25916 1.20600 1.00534 0.95971 0.97390 1.21233 0.95962 0.94556 0.95365 1.21044 1.00545 0.92539 1.00171 1.20701 0.99421 0.85273 0.97316 1.98387 1.97236 1.10564 1.96847 1.20874 1.02584 0.93368 1.00380 1.17402 0.92099 0.90412 0.86984 1.91589 1.72330 1.87121 1.58562 0.94680 0.94599 0.89672 0.92957 0.93910 0.88701 0.89553 0.92882 0.94046 0.92708 0.82935 0.83673 0.83293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.42 11.01 101.05 1.11 1.54 16 2 O -0.37 -6.47 9.09 -35.23 -0.32 -6.79 16 3 C 0.05 0.67 6.28 37.16 0.23 0.91 16 4 C 0.10 1.63 5.68 -4.04 -0.02 1.60 16 5 N -0.58 -12.24 2.44 -176.25 -0.43 -12.67 16 6 C 0.25 6.55 5.02 -5.19 -0.03 6.52 16 7 C -0.53 -14.92 9.39 -34.44 -0.32 -15.24 16 8 H 0.06 1.52 7.81 -52.49 -0.41 1.11 16 9 C 0.06 1.81 5.46 -17.82 -0.10 1.71 16 10 N -0.89 -26.69 13.29 55.43 0.74 -25.96 16 11 Si 0.90 21.75 29.54 -169.99 -5.02 16.73 16 12 H -0.28 -6.48 7.11 56.52 0.40 -6.08 16 13 H -0.29 -6.87 7.11 56.52 0.40 -6.47 16 14 H -0.28 -6.74 7.11 56.52 0.40 -6.34 16 15 C 0.55 11.64 6.84 -12.43 -0.09 11.56 16 16 O -0.52 -13.63 16.46 5.30 0.09 -13.55 16 17 C -0.14 -2.24 4.91 -104.91 -0.51 -2.76 16 18 C -0.05 -0.64 7.47 -39.20 -0.29 -0.93 16 19 C -0.12 -1.21 9.81 -39.60 -0.39 -1.60 16 20 C 0.00 0.00 6.32 -39.40 -0.25 -0.25 16 21 Cl -0.06 -0.52 28.95 -51.86 -1.50 -2.02 16 22 C -0.15 -1.72 9.79 -39.53 -0.39 -2.11 16 23 C 0.15 2.24 7.27 -38.97 -0.28 1.96 16 24 F -0.12 -2.00 16.69 2.25 0.04 -1.96 16 25 H 0.03 0.38 8.14 -51.93 -0.42 -0.05 16 26 H 0.04 0.44 8.14 -51.93 -0.42 0.02 16 27 H 0.08 1.07 8.14 -51.93 -0.42 0.65 16 28 H 0.05 0.60 8.14 -51.93 -0.42 0.18 16 29 H 0.04 0.63 8.14 -51.93 -0.42 0.21 16 30 H 0.09 1.57 8.11 -51.93 -0.42 1.15 16 31 H 0.09 1.08 4.42 -51.93 -0.23 0.85 16 32 H 0.05 1.46 6.68 -51.93 -0.35 1.11 16 33 H 0.04 1.26 7.35 -51.93 -0.38 0.88 16 34 H 0.26 7.46 8.31 -40.82 -0.34 7.12 16 35 H 0.15 1.73 7.59 -52.49 -0.40 1.33 16 36 H 0.15 1.03 8.06 -52.49 -0.42 0.61 16 37 H 0.15 1.37 8.06 -52.49 -0.42 0.95 16 LS Contribution 340.12 15.07 5.13 5.13 Total: -1.00 -34.08 340.12 -6.89 -40.97 By element: Atomic # 1 Polarization: 1.51 SS G_CDS: -4.28 Total: -2.77 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: -1.32 Total: 2.89 kcal Atomic # 7 Polarization: -38.93 SS G_CDS: 0.31 Total: -38.62 kcal Atomic # 8 Polarization: -20.10 SS G_CDS: -0.23 Total: -20.34 kcal Atomic # 9 Polarization: -2.00 SS G_CDS: 0.04 Total: -1.96 kcal Atomic # 14 Polarization: 21.75 SS G_CDS: -5.02 Total: 16.73 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.50 Total: -2.02 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -34.08 -6.89 -40.97 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000071140987.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.522 kcal (2) G-P(sol) polarization free energy of solvation -34.076 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.892 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.968 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds