Wall clock time and date at job start Tue Mar 31 2020 11:03:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42906 * 113.99393 * 2 1 4 4 C 1.52998 * 109.46433 * 179.97438 * 3 2 1 5 5 N 1.46502 * 109.47308 * 64.99940 * 4 3 2 6 6 C 1.46500 * 119.99629 * 84.41648 * 5 4 3 7 7 C 1.50693 * 109.47407 * 90.00342 * 6 5 4 8 8 H 1.08007 * 120.00152 * 359.97438 * 7 6 5 9 9 C 1.37880 * 120.00041 * 180.02562 * 7 6 5 10 10 N 1.31511 * 120.00217 * 359.97438 * 9 7 6 11 11 Si 1.86804 * 119.99897 * 179.97438 * 9 7 6 12 12 H 1.48505 * 109.47228 * 89.99563 * 11 9 7 13 13 H 1.48505 * 109.46958 * 209.99521 * 11 9 7 14 14 H 1.48500 * 109.47244 * 329.99407 * 11 9 7 15 15 C 1.34770 * 119.99960 * 264.41165 * 5 4 3 16 16 O 1.21569 * 120.00402 * 5.18610 * 15 5 4 17 17 C 1.47692 * 120.00112 * 185.18373 * 15 5 4 18 18 C 1.39654 * 120.15879 * 56.16491 * 17 15 5 19 19 C 1.37975 * 119.86431 * 179.72028 * 18 17 15 20 20 Cl 1.73604 * 119.90564 * 180.27533 * 19 18 17 21 21 C 1.38558 * 120.18906 * 0.55908 * 19 18 17 22 22 C 1.38194 * 120.32624 * 359.71692 * 21 19 18 23 23 C 1.38314 * 120.13369 * 0.02562 * 22 21 19 24 24 F 1.35101 * 120.09950 * 179.97438 * 23 22 21 25 25 H 1.09001 * 109.47547 * 299.99701 * 1 2 3 26 26 H 1.08997 * 109.47612 * 60.00358 * 1 2 3 27 27 H 1.09006 * 109.46781 * 180.02562 * 1 2 3 28 28 H 1.08999 * 109.47078 * 60.00396 * 3 2 1 29 29 H 1.08992 * 109.47054 * 299.99714 * 3 2 1 30 30 H 1.09003 * 109.47662 * 304.99485 * 4 3 2 31 31 H 1.09003 * 109.46860 * 184.99725 * 4 3 2 32 32 H 1.09010 * 109.46681 * 209.99944 * 6 5 4 33 33 H 1.08997 * 109.47316 * 329.99755 * 6 5 4 34 34 H 0.96997 * 120.00128 * 179.97438 * 10 9 7 35 35 H 1.07999 * 120.06873 * 0.02562 * 18 17 15 36 36 H 1.08001 * 119.83720 * 179.69462 * 21 19 18 37 37 H 1.08003 * 119.93398 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3056 0.0000 4 6 3.5353 1.1847 0.0006 5 7 3.9766 0.5640 -1.2509 6 6 4.1704 1.3863 -2.4477 7 6 5.5913 1.8865 -2.4889 8 1 6.2811 1.6190 -1.7020 9 6 6.0107 2.6865 -3.5307 10 7 5.1708 3.0127 -4.4886 11 14 7.7719 3.3071 -3.5813 12 1 8.6190 2.3332 -4.3157 13 1 7.8142 4.6205 -4.2732 14 1 8.2825 3.4611 -2.1954 15 6 4.2043 -0.7634 -1.3010 16 8 3.9539 -1.4600 -0.3367 17 6 4.7580 -1.3718 -2.5276 18 6 5.9650 -0.9098 -3.0567 19 6 6.4797 -1.4865 -4.1997 20 17 7.9836 -0.9178 -4.8543 21 6 5.7967 -2.5142 -4.8297 22 6 4.5988 -2.9737 -4.3162 23 6 4.0732 -2.4089 -3.1682 24 9 2.9019 -2.8583 -2.6670 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 1.6885 1.8464 0.8900 29 1 1.6885 1.8464 -0.8899 30 1 3.8508 0.5687 0.8427 31 1 3.9783 2.1767 0.0902 32 1 3.9702 0.7874 -3.3363 33 1 3.4871 2.2350 -2.4201 34 1 5.4657 3.5758 -5.2213 35 1 6.4970 -0.1060 -2.5695 36 1 6.2023 -2.9582 -5.7268 37 1 4.0715 -3.7749 -4.8127 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000103214096.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:31 Heat of formation + Delta-G solvation = -102.343976 kcal Electronic energy + Delta-G solvation = -24970.306475 eV Core-core repulsion = 21074.534017 eV Total energy + Delta-G solvation = -3895.772459 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.54314 -39.61114 -38.11916 -37.21269 -35.95480 -35.01543 -32.74606 -31.40340 -29.90591 -29.39036 -27.15867 -26.03813 -23.93643 -23.17873 -22.50089 -21.73053 -19.02138 -17.28995 -16.97858 -16.43670 -16.37992 -16.02808 -15.86538 -15.38348 -15.05547 -14.98265 -14.50531 -14.43190 -13.75951 -13.60048 -13.04485 -12.93000 -12.83267 -12.43354 -12.25004 -12.08343 -11.72429 -11.62430 -11.36234 -11.18742 -10.98743 -10.98341 -10.78702 -10.68799 -10.51794 -10.17834 -9.81279 -9.35517 -9.16736 -8.72240 -8.61021 -8.20245 -7.76599 -6.25651 -4.32989 1.15675 1.43857 2.46688 3.20070 3.27485 3.27804 3.32550 3.68863 3.96654 4.18730 4.28255 4.49740 4.95765 5.03257 5.10684 5.32677 5.39346 5.48137 5.54507 5.63102 5.66312 5.71995 5.84469 5.86099 6.01536 6.10142 6.22391 6.34400 6.45651 6.60447 6.69872 6.99521 7.13998 7.42935 7.56902 7.66488 7.95996 8.25366 8.68746 8.95247 9.33346 10.80253 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.011412 B = 0.006887 C = 0.004748 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2452.967754 B = 4064.393320 C = 5895.433724 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.371 6.371 3 C 0.044 3.956 4 C 0.122 3.878 5 N -0.586 5.586 6 C 0.237 3.763 7 C -0.544 4.544 8 H 0.064 0.936 9 C 0.076 3.924 10 N -0.880 5.880 11 Si 0.881 3.119 12 H -0.269 1.269 13 H -0.285 1.285 14 H -0.272 1.272 15 C 0.566 3.434 16 O -0.541 6.541 17 C -0.138 4.138 18 C -0.017 4.017 19 C -0.054 4.054 20 Cl -0.067 7.067 21 C -0.072 4.072 22 C -0.163 4.163 23 C 0.140 3.860 24 F -0.127 7.127 25 H 0.034 0.966 26 H 0.036 0.964 27 H 0.080 0.920 28 H 0.050 0.950 29 H 0.051 0.949 30 H 0.083 0.917 31 H 0.095 0.905 32 H 0.036 0.964 33 H 0.037 0.963 34 H 0.266 0.734 35 H 0.173 0.827 36 H 0.138 0.862 37 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.177 -5.934 0.856 6.378 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 O -0.289 6.289 3 C -0.033 4.033 4 C -0.001 4.001 5 N -0.316 5.316 6 C 0.117 3.883 7 C -0.582 4.582 8 H 0.082 0.918 9 C -0.129 4.129 10 N -0.517 5.517 11 Si 0.708 3.292 12 H -0.194 1.194 13 H -0.211 1.211 14 H -0.196 1.196 15 C 0.352 3.648 16 O -0.420 6.420 17 C -0.142 4.142 18 C -0.036 4.036 19 C -0.081 4.081 20 Cl -0.038 7.038 21 C -0.091 4.091 22 C -0.182 4.182 23 C 0.119 3.881 24 F -0.106 7.106 25 H 0.052 0.948 26 H 0.054 0.946 27 H 0.098 0.902 28 H 0.068 0.932 29 H 0.069 0.931 30 H 0.102 0.898 31 H 0.113 0.887 32 H 0.054 0.946 33 H 0.055 0.945 34 H 0.076 0.924 35 H 0.190 0.810 36 H 0.156 0.844 37 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -2.140 -6.282 1.147 6.735 hybrid contribution 0.545 0.893 -0.384 1.114 sum -1.595 -5.389 0.762 5.672 Atomic orbital electron populations 1.22669 0.82403 1.02173 0.99197 1.88116 1.18356 1.27236 1.95176 1.23037 0.95282 0.85132 0.99889 1.21366 0.91299 0.99450 0.88012 1.48012 1.64252 1.06697 1.12685 1.19451 0.97072 0.90377 0.81391 1.21425 0.96110 1.32011 1.08653 0.91785 1.24858 0.97535 0.95351 0.95116 1.69907 1.34951 1.35745 1.11068 0.86728 0.85016 0.78774 0.78688 1.19404 1.21059 1.19643 1.17797 0.77941 0.82549 0.86477 1.90735 1.52540 1.61600 1.37076 1.19911 0.97415 0.98300 0.98623 1.21776 0.93605 0.95408 0.92825 1.20740 0.90875 0.98932 0.97526 1.98362 1.31179 1.88699 1.85534 1.20898 0.93723 0.95114 0.99347 1.20828 0.97612 1.03184 0.96566 1.17696 0.82724 0.94218 0.93439 1.91528 1.44499 1.87724 1.86813 0.94758 0.94579 0.90164 0.93174 0.93061 0.89826 0.88710 0.94560 0.94534 0.92369 0.80985 0.84370 0.84013 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.45 11.01 101.05 1.11 1.56 16 2 O -0.37 -6.83 9.95 -35.40 -0.35 -7.19 16 3 C 0.04 0.73 6.28 37.16 0.23 0.96 16 4 C 0.12 2.22 5.83 -4.04 -0.02 2.20 16 5 N -0.59 -12.41 2.41 -176.23 -0.43 -12.84 16 6 C 0.24 5.45 4.75 -5.20 -0.02 5.43 16 7 C -0.54 -13.04 6.49 -34.44 -0.22 -13.26 16 8 H 0.06 1.54 7.21 -52.48 -0.38 1.16 16 9 C 0.08 1.89 5.46 -17.82 -0.10 1.80 16 10 N -0.88 -23.10 13.29 55.43 0.74 -22.36 16 11 Si 0.88 19.50 29.54 -169.99 -5.02 14.48 16 12 H -0.27 -5.86 7.11 56.52 0.40 -5.46 16 13 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 14 H -0.27 -5.97 7.11 56.52 0.40 -5.57 16 15 C 0.57 12.54 6.60 -12.40 -0.08 12.46 16 16 O -0.54 -13.03 16.02 5.14 0.08 -12.95 16 17 C -0.14 -2.83 4.42 -104.92 -0.46 -3.29 16 18 C -0.02 -0.34 7.66 -39.15 -0.30 -0.64 16 19 C -0.05 -0.94 6.31 -39.56 -0.25 -1.19 16 20 Cl -0.07 -1.13 28.95 -51.86 -1.50 -2.63 16 21 C -0.07 -1.06 9.82 -39.48 -0.39 -1.45 16 22 C -0.16 -2.45 10.01 -39.57 -0.40 -2.84 16 23 C 0.14 2.60 7.28 -38.96 -0.28 2.32 16 24 F -0.13 -2.49 16.72 2.25 0.04 -2.45 16 25 H 0.03 0.40 8.14 -51.93 -0.42 -0.02 16 26 H 0.04 0.47 8.14 -51.93 -0.42 0.05 16 27 H 0.08 1.03 8.14 -51.93 -0.42 0.61 16 28 H 0.05 0.68 8.14 -51.93 -0.42 0.25 16 29 H 0.05 0.85 8.12 -51.93 -0.42 0.43 16 30 H 0.08 1.55 7.33 -51.93 -0.38 1.17 16 31 H 0.09 1.58 8.11 -51.93 -0.42 1.16 16 32 H 0.04 0.91 6.77 -51.92 -0.35 0.56 16 33 H 0.04 0.88 8.05 -51.93 -0.42 0.46 16 34 H 0.27 6.73 8.31 -40.82 -0.34 6.40 16 35 H 0.17 3.64 5.22 -52.49 -0.27 3.37 16 36 H 0.14 1.60 8.06 -52.49 -0.42 1.17 16 37 H 0.14 1.66 8.06 -52.48 -0.42 1.24 16 LS Contribution 337.91 15.07 5.09 5.09 Total: -1.00 -28.95 337.91 -6.85 -35.80 By element: Atomic # 1 Polarization: 5.32 SS G_CDS: -4.32 Total: 1.00 kcal Atomic # 6 Polarization: 5.23 SS G_CDS: -1.19 Total: 4.04 kcal Atomic # 7 Polarization: -35.51 SS G_CDS: 0.31 Total: -35.20 kcal Atomic # 8 Polarization: -19.86 SS G_CDS: -0.27 Total: -20.13 kcal Atomic # 9 Polarization: -2.49 SS G_CDS: 0.04 Total: -2.45 kcal Atomic # 14 Polarization: 19.50 SS G_CDS: -5.02 Total: 14.48 kcal Atomic # 17 Polarization: -1.13 SS G_CDS: -1.50 Total: -2.63 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -28.95 -6.85 -35.80 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000103214096.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.540 kcal (2) G-P(sol) polarization free energy of solvation -28.950 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.490 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.804 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.344 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds