Wall clock time and date at job start Tue Mar 31 2020 11:03:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42897 * 113.99554 * 2 1 4 4 C 1.52999 * 109.46956 * 179.97438 * 3 2 1 5 5 N 1.46909 * 109.46872 * 63.98380 * 4 3 2 6 6 C 1.46901 * 110.99569 * 75.81477 * 5 4 3 7 7 C 1.50707 * 109.46670 * 199.59017 * 6 5 4 8 8 H 1.08004 * 119.99912 * 354.91821 * 7 6 5 9 9 C 1.37876 * 119.99648 * 175.19490 * 7 6 5 10 10 N 1.31510 * 120.00391 * 359.72245 * 9 7 6 11 11 Si 1.86801 * 119.99767 * 179.72498 * 9 7 6 12 12 H 1.48502 * 109.47219 * 60.00157 * 11 9 7 13 13 H 1.48498 * 109.47315 * 179.97438 * 11 9 7 14 14 H 1.48493 * 109.47134 * 299.99898 * 11 9 7 15 15 C 1.39071 * 110.99917 * 199.76444 * 5 4 3 16 16 N 1.32415 * 119.69262 * 295.45984 * 15 5 4 17 17 C 1.31947 * 121.63514 * 179.71190 * 16 15 5 18 18 C 1.38171 * 120.83813 * 0.56736 * 17 16 15 19 19 Cl 1.73602 * 120.35053 * 179.74577 * 18 17 16 20 20 C 1.38919 * 119.29988 * 359.71843 * 18 17 16 21 21 C 1.38346 * 118.49823 * 0.02562 * 20 18 17 22 22 N 1.48008 * 120.44750 * 179.97438 * 21 20 18 23 23 O 1.21798 * 119.99797 * 5.17365 * 22 21 20 24 24 O 1.21800 * 120.00168 * 185.16328 * 22 21 20 25 25 H 1.09006 * 109.46774 * 179.97438 * 1 2 3 26 26 H 1.08992 * 109.47376 * 300.00120 * 1 2 3 27 27 H 1.08998 * 109.46967 * 60.00512 * 1 2 3 28 28 H 1.08999 * 109.47355 * 60.00337 * 3 2 1 29 29 H 1.08999 * 109.47364 * 299.99603 * 3 2 1 30 30 H 1.09001 * 109.47294 * 303.98857 * 4 3 2 31 31 H 1.08996 * 109.47743 * 183.98253 * 4 3 2 32 32 H 1.08995 * 109.47629 * 79.59117 * 6 5 4 33 33 H 1.08993 * 109.47007 * 319.58642 * 6 5 4 34 34 H 0.96996 * 120.00104 * 180.02562 * 10 9 7 35 35 H 1.08001 * 119.58049 * 180.26561 * 17 16 15 36 36 H 1.08005 * 120.75296 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 0.0006 5 7 3.9761 0.5402 -1.2438 6 6 3.9088 1.4764 -2.3738 7 6 3.8917 0.7025 -3.6669 8 1 4.0099 -0.3710 -3.6553 9 6 3.7309 1.3655 -4.8650 10 7 3.5870 2.6726 -4.8791 11 14 3.7175 0.4071 -6.4684 12 1 2.6031 -0.5743 -6.4491 13 1 3.5306 1.3451 -7.6043 14 1 5.0073 -0.3115 -6.6263 15 6 5.2567 0.0155 -1.1069 16 7 6.2802 0.8294 -0.8985 17 6 7.5100 0.3727 -0.7575 18 6 7.7761 -0.9809 -0.8346 19 17 9.4000 -1.5674 -0.6538 20 6 6.7303 -1.8677 -1.0578 21 6 5.4514 -1.3587 -1.1962 22 7 4.3055 -2.2643 -1.4358 23 8 4.4692 -3.4711 -1.4186 24 8 3.1989 -1.8028 -1.6500 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8899 27 1 -0.3633 0.5137 -0.8900 28 1 1.6886 1.8464 0.8900 29 1 1.6886 1.8464 -0.8900 30 1 3.8520 0.5835 0.8530 31 1 3.9786 2.1780 0.0720 32 1 4.7789 2.1325 -2.3546 33 1 3.0010 2.0746 -2.2965 34 1 3.4735 3.1390 -5.7220 35 1 8.3197 1.0662 -0.5844 36 1 6.9116 -2.9305 -1.1219 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000129747012.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:16 Heat of formation + Delta-G solvation = 12.239826 kcal Electronic energy + Delta-G solvation = -25095.348917 eV Core-core repulsion = 21224.465147 eV Total energy + Delta-G solvation = -3870.883770 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -41.67844 -40.32048 -37.86556 -36.99316 -36.17230 -35.60077 -33.00772 -32.72795 -31.05956 -29.14516 -27.01080 -26.24365 -25.64436 -23.74254 -22.71674 -22.47378 -20.58840 -18.90519 -18.20345 -17.30097 -16.91103 -16.80226 -16.17295 -15.96728 -15.69118 -15.22898 -14.82483 -14.45722 -14.31087 -13.86460 -13.49888 -13.40101 -12.79454 -12.19976 -12.14074 -11.77715 -11.53323 -11.47353 -11.32313 -10.93049 -10.80892 -10.78867 -10.59359 -10.49163 -10.40575 -10.26579 -10.10223 -9.85275 -9.46553 -9.14377 -8.99245 -8.53246 -7.86009 -6.12395 -4.13059 0.09396 0.68129 1.56606 1.78458 2.04653 3.29321 3.32601 3.33741 3.39117 3.74062 4.23194 4.27530 4.33706 4.39806 4.66296 4.78173 5.09708 5.25212 5.40307 5.46793 5.49881 5.67573 5.71109 5.80617 5.83636 5.94451 6.08781 6.22685 6.81634 6.97248 7.05953 7.48209 7.55010 7.70985 7.79096 7.92500 8.24553 8.39287 8.90485 9.50392 10.97880 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.009642 B = 0.006382 C = 0.004989 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2903.359328 B = 4386.493813 C = 5610.582661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.071 3.929 4 C 0.068 3.932 5 N -0.473 5.473 6 C 0.196 3.804 7 C -0.506 4.506 8 H 0.058 0.942 9 C 0.062 3.938 10 N -0.895 5.895 11 Si 0.894 3.106 12 H -0.271 1.271 13 H -0.286 1.286 14 H -0.280 1.280 15 C 0.412 3.588 16 N -0.485 5.485 17 C 0.173 3.827 18 C -0.115 4.115 19 Cl -0.042 7.042 20 C -0.005 4.005 21 C -0.066 4.066 22 N 0.026 4.974 23 O -0.232 6.232 24 O -0.028 6.028 25 H 0.081 0.919 26 H 0.027 0.973 27 H 0.040 0.960 28 H 0.044 0.956 29 H 0.062 0.938 30 H 0.063 0.937 31 H 0.062 0.938 32 H 0.014 0.986 33 H 0.049 0.951 34 H 0.264 0.736 35 H 0.177 0.823 36 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.023 -3.579 11.564 13.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.281 6.281 3 C -0.006 4.006 4 C -0.059 4.059 5 N -0.198 5.198 6 C 0.074 3.926 7 C -0.544 4.544 8 H 0.076 0.924 9 C -0.140 4.140 10 N -0.534 5.534 11 Si 0.722 3.278 12 H -0.197 1.197 13 H -0.211 1.211 14 H -0.205 1.205 15 C 0.183 3.817 16 N -0.198 5.198 17 C 0.012 3.988 18 C -0.145 4.145 19 Cl -0.013 7.013 20 C -0.032 4.032 21 C -0.153 4.153 22 N 0.552 4.448 23 O -0.424 6.424 24 O -0.274 6.274 25 H 0.099 0.901 26 H 0.046 0.954 27 H 0.059 0.941 28 H 0.063 0.937 29 H 0.080 0.920 30 H 0.082 0.918 31 H 0.080 0.920 32 H 0.031 0.969 33 H 0.067 0.933 34 H 0.073 0.927 35 H 0.194 0.806 36 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 5.443 -2.869 11.536 13.075 hybrid contribution 0.436 -0.692 -1.022 1.308 sum 5.879 -3.561 10.515 12.562 Atomic orbital electron populations 1.22643 0.82286 1.02209 0.99078 1.88053 1.18333 1.26592 1.95118 1.22479 0.92509 0.85650 0.99957 1.22053 0.94733 0.98063 0.91057 1.60764 1.12787 1.40460 1.05777 1.20055 0.98029 0.89309 0.85199 1.20990 1.49673 0.93886 0.89881 0.92350 1.24881 0.95142 0.94864 0.99120 1.69916 1.49558 1.07052 1.26905 0.86607 0.78829 0.79811 0.82593 1.19665 1.21124 1.20527 1.20032 0.91030 0.87421 0.83263 1.68582 0.99256 1.37732 1.14250 1.23072 0.94725 0.91781 0.89223 1.21739 0.87680 0.94562 1.10555 1.98386 1.18237 1.88582 1.96098 1.21248 0.88809 1.02354 0.90813 1.21943 0.87891 0.91001 1.14505 1.43020 1.02149 1.00541 0.99121 1.94471 1.91190 0.97119 1.59584 1.94765 1.07935 1.80116 1.44575 0.90073 0.95406 0.94102 0.93748 0.91980 0.91800 0.92041 0.96859 0.93290 0.92688 0.80629 0.81460 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.48 11.01 101.05 1.11 1.60 16 2 O -0.36 -6.40 10.53 -35.23 -0.37 -6.78 16 3 C 0.07 1.16 6.11 37.16 0.23 1.39 16 4 C 0.07 1.17 5.17 -3.82 -0.02 1.15 16 5 N -0.47 -9.87 2.19 -174.55 -0.38 -10.25 16 6 C 0.20 4.81 4.53 -4.97 -0.02 4.79 16 7 C -0.51 -13.91 8.96 -34.44 -0.31 -14.22 16 8 H 0.06 1.66 7.28 -52.48 -0.38 1.27 16 9 C 0.06 1.72 5.46 -17.82 -0.10 1.63 16 10 N -0.90 -25.66 13.29 55.43 0.74 -24.93 16 11 Si 0.89 21.86 29.54 -169.99 -5.02 16.84 16 12 H -0.27 -6.63 7.11 56.52 0.40 -6.23 16 13 H -0.29 -6.83 7.11 56.52 0.40 -6.43 16 14 H -0.28 -6.82 7.11 56.52 0.40 -6.42 16 15 C 0.41 8.03 4.80 -154.96 -0.74 7.29 16 16 N -0.48 -8.52 9.45 -12.40 -0.12 -8.64 16 17 C 0.17 2.37 10.97 -17.53 -0.19 2.18 16 18 C -0.12 -1.52 6.34 -39.35 -0.25 -1.76 16 19 Cl -0.04 -0.44 28.99 -51.86 -1.50 -1.95 16 20 C 0.00 -0.07 9.47 -39.29 -0.37 -0.45 16 21 C -0.07 -1.23 6.88 -79.60 -0.55 -1.78 16 22 N 0.03 0.54 4.45 34.13 0.15 0.70 16 23 O -0.23 -4.66 18.53 -29.46 -0.55 -5.20 16 24 O -0.03 -0.62 16.52 -29.46 -0.49 -1.11 16 25 H 0.08 1.03 8.14 -51.93 -0.42 0.60 16 26 H 0.03 0.32 8.14 -51.93 -0.42 -0.10 16 27 H 0.04 0.57 8.14 -51.93 -0.42 0.15 16 28 H 0.04 0.59 8.14 -51.93 -0.42 0.16 16 29 H 0.06 1.10 6.68 -51.93 -0.35 0.76 16 30 H 0.06 1.03 7.91 -51.93 -0.41 0.62 16 31 H 0.06 1.01 8.00 -51.93 -0.42 0.59 16 32 H 0.01 0.35 7.42 -51.93 -0.39 -0.03 16 33 H 0.05 1.26 6.46 -51.93 -0.34 0.92 16 34 H 0.26 7.21 8.31 -40.82 -0.34 6.87 16 35 H 0.18 1.77 8.06 -52.49 -0.42 1.34 16 36 H 0.17 2.18 7.70 -52.48 -0.40 1.78 16 LS Contribution 334.89 15.07 5.05 5.05 Total: -1.00 -30.97 334.89 -7.64 -38.61 By element: Atomic # 1 Polarization: -0.21 SS G_CDS: -3.93 Total: -4.14 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: -1.21 Total: 1.81 kcal Atomic # 7 Polarization: -43.51 SS G_CDS: 0.39 Total: -43.12 kcal Atomic # 8 Polarization: -11.69 SS G_CDS: -1.40 Total: -13.09 kcal Atomic # 14 Polarization: 21.86 SS G_CDS: -5.02 Total: 16.84 kcal Atomic # 17 Polarization: -0.44 SS G_CDS: -1.50 Total: -1.95 kcal Total LS contribution 5.05 Total: 5.05 kcal Total: -30.97 -7.64 -38.61 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000129747012.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 50.846 kcal (2) G-P(sol) polarization free energy of solvation -30.971 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.875 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.606 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.240 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds