Wall clock time and date at job start Tue Mar 31 2020 11:03:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42900 * 113.99743 * 2 1 4 4 C 1.53003 * 109.46834 * 180.02562 * 3 2 1 5 5 N 1.46495 * 109.47432 * 65.00047 * 4 3 2 6 6 C 1.46496 * 120.00585 * 89.99551 * 5 4 3 7 7 C 1.50700 * 109.46699 * 83.63904 * 6 5 4 8 8 H 1.08001 * 120.00478 * 0.02562 * 7 6 5 9 9 C 1.37885 * 120.00127 * 180.02562 * 7 6 5 10 10 N 1.31513 * 119.99346 * 0.02562 * 9 7 6 11 11 Si 1.86800 * 120.00228 * 180.02562 * 9 7 6 12 12 H 1.48502 * 109.46909 * 0.02562 * 11 9 7 13 13 H 1.48500 * 109.46953 * 120.00293 * 11 9 7 14 14 H 1.48491 * 109.47181 * 240.00239 * 11 9 7 15 15 C 1.34780 * 119.99792 * 270.00045 * 5 4 3 16 16 O 1.21571 * 120.00204 * 5.20024 * 15 5 4 17 17 C 1.47698 * 119.99918 * 185.20373 * 15 5 4 18 18 C 1.39673 * 120.16078 * 52.72209 * 17 15 5 19 19 C 1.37847 * 119.89958 * 179.76753 * 18 17 15 20 20 C 1.38448 * 120.23482 * 0.50741 * 19 18 17 21 21 C 1.38306 * 120.32341 * 359.74510 * 20 19 18 22 22 Cl 1.73597 * 119.95166 * 179.97438 * 21 20 19 23 23 C 1.38435 * 120.09268 * 359.97438 * 21 20 19 24 24 F 1.35102 * 120.11356 * 180.02562 * 23 21 20 25 25 H 1.09001 * 109.47080 * 300.00108 * 1 2 3 26 26 H 1.08994 * 109.47491 * 60.00277 * 1 2 3 27 27 H 1.09010 * 109.47000 * 180.02562 * 1 2 3 28 28 H 1.08994 * 109.47335 * 59.99642 * 3 2 1 29 29 H 1.08999 * 109.46960 * 299.99699 * 3 2 1 30 30 H 1.08996 * 109.46848 * 304.99773 * 4 3 2 31 31 H 1.08999 * 109.47000 * 184.99925 * 4 3 2 32 32 H 1.08995 * 109.47577 * 203.64294 * 6 5 4 33 33 H 1.08999 * 109.46876 * 323.64794 * 6 5 4 34 34 H 0.97009 * 119.99503 * 180.02562 * 10 9 7 35 35 H 1.08004 * 120.04608 * 359.97438 * 18 17 15 36 36 H 1.08004 * 119.88217 * 180.25278 * 19 18 17 37 37 H 1.08005 * 119.84061 * 179.76563 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 3.5354 1.1847 -0.0006 5 7 3.9757 0.5645 -1.2527 6 6 4.2863 1.4006 -2.4148 7 6 5.7005 1.9093 -2.3039 8 1 6.3074 1.6367 -1.4531 9 6 6.2198 2.7228 -3.2886 10 7 5.4807 3.0551 -4.3244 11 14 7.9730 3.3528 -3.1515 12 1 8.5876 2.8380 -1.9015 13 1 8.7605 2.8832 -4.3197 14 1 7.9648 4.8375 -3.1246 15 6 4.0949 -0.7755 -1.3355 16 8 3.7475 -1.4754 -0.4041 17 6 4.6475 -1.3936 -2.5578 18 6 5.8778 -0.9687 -3.0644 19 6 6.3908 -1.5526 -4.2028 20 6 5.6860 -2.5518 -4.8520 21 6 4.4644 -2.9763 -4.3616 22 17 3.5885 -4.2295 -5.1837 23 6 3.9393 -2.4032 -3.2161 24 9 2.7463 -2.8179 -2.7364 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5137 -0.8899 27 1 -0.3633 -1.0278 0.0005 28 1 1.6885 1.8464 0.8899 29 1 1.6886 1.8463 -0.8900 30 1 3.8514 0.5683 0.8409 31 1 3.9785 2.1765 0.0889 32 1 4.1829 0.8103 -3.3252 33 1 3.5981 2.2451 -2.4491 34 1 5.8462 3.6272 -5.0174 35 1 6.4279 -0.1860 -2.5630 36 1 7.3441 -1.2266 -4.5920 37 1 6.0921 -3.0024 -5.7457 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000130649167.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:33 Heat of formation + Delta-G solvation = -101.850919 kcal Electronic energy + Delta-G solvation = -24857.795143 eV Core-core repulsion = 20962.044065 eV Total energy + Delta-G solvation = -3895.751078 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.55204 -39.62174 -38.13121 -37.18805 -36.26531 -35.02029 -32.76323 -31.26830 -30.09664 -29.37030 -27.17346 -26.01742 -23.94608 -23.14181 -22.45213 -21.83549 -19.04984 -17.32123 -16.95142 -16.49971 -16.41498 -15.99067 -15.80316 -15.43987 -15.02850 -14.99170 -14.48806 -14.41183 -14.10855 -13.56023 -13.01500 -12.93924 -12.72546 -12.46084 -12.22556 -11.91394 -11.77776 -11.67482 -11.39419 -11.20268 -11.15026 -10.99859 -10.87188 -10.81311 -10.68235 -10.23954 -9.83668 -9.32474 -9.14502 -8.73895 -8.53462 -8.37964 -7.76427 -6.29968 -4.38398 1.16076 1.34169 2.15900 3.11786 3.22375 3.24145 3.32160 3.71238 3.97223 4.19522 4.24330 4.37194 4.95457 5.00838 5.22035 5.29045 5.41363 5.49745 5.50377 5.64493 5.68223 5.69905 5.82945 5.88547 6.05005 6.12984 6.16401 6.35209 6.59771 6.64991 6.69525 7.00274 7.12790 7.42986 7.58781 7.63382 7.92504 8.26715 8.66565 8.95899 9.28639 10.75802 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.009175 B = 0.007065 C = 0.004389 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3050.932583 B = 3962.137068 C = 6378.182700 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.367 6.367 3 C 0.043 3.957 4 C 0.125 3.875 5 N -0.587 5.587 6 C 0.234 3.766 7 C -0.543 4.543 8 H 0.066 0.934 9 C 0.070 3.930 10 N -0.881 5.881 11 Si 0.891 3.109 12 H -0.270 1.270 13 H -0.281 1.281 14 H -0.282 1.282 15 C 0.563 3.437 16 O -0.535 6.535 17 C -0.140 4.140 18 C -0.026 4.026 19 C -0.127 4.127 20 C -0.072 4.072 21 C -0.092 4.092 22 Cl -0.063 7.063 23 C 0.147 3.853 24 F -0.118 7.118 25 H 0.033 0.967 26 H 0.035 0.965 27 H 0.080 0.920 28 H 0.050 0.950 29 H 0.050 0.950 30 H 0.080 0.920 31 H 0.097 0.903 32 H 0.040 0.960 33 H 0.034 0.966 34 H 0.266 0.734 35 H 0.170 0.830 36 H 0.140 0.860 37 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.162 -5.789 0.576 6.206 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.285 6.285 3 C -0.034 4.034 4 C 0.002 3.998 5 N -0.317 5.317 6 C 0.114 3.886 7 C -0.582 4.582 8 H 0.084 0.916 9 C -0.135 4.135 10 N -0.518 5.518 11 Si 0.718 3.282 12 H -0.194 1.194 13 H -0.206 1.206 14 H -0.208 1.208 15 C 0.349 3.651 16 O -0.413 6.413 17 C -0.144 4.144 18 C -0.044 4.044 19 C -0.145 4.145 20 C -0.091 4.091 21 C -0.120 4.120 22 Cl -0.035 7.035 23 C 0.126 3.874 24 F -0.097 7.097 25 H 0.052 0.948 26 H 0.053 0.947 27 H 0.098 0.902 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.098 0.902 31 H 0.115 0.885 32 H 0.058 0.942 33 H 0.052 0.948 34 H 0.076 0.924 35 H 0.187 0.813 36 H 0.157 0.843 37 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -2.377 -6.313 0.840 6.798 hybrid contribution 0.329 0.728 -0.305 0.855 sum -2.047 -5.585 0.536 5.973 Atomic orbital electron populations 1.22667 0.82543 1.02165 0.99094 1.88158 1.18200 1.26987 1.95139 1.23045 0.95358 0.85260 0.99784 1.21338 0.91239 0.99486 0.87775 1.47989 1.64281 1.05379 1.14092 1.19507 0.96285 0.90180 0.82635 1.21500 0.98031 1.31112 1.07533 0.91633 1.24946 0.97970 0.95571 0.94989 1.69940 1.36549 1.35392 1.09961 0.86549 0.84293 0.79009 0.78373 1.19450 1.20643 1.20775 1.17809 0.78371 0.82698 0.86225 1.90752 1.49419 1.62021 1.39126 1.20031 0.97587 0.98186 0.98593 1.22062 0.93117 0.95177 0.94015 1.21126 1.01016 0.96301 0.96093 1.21029 0.91809 0.96620 0.99599 1.20706 0.96810 0.97939 0.96504 1.98348 1.76031 1.51154 1.77928 1.17333 0.82626 0.94924 0.92525 1.91551 1.42181 1.88649 1.87284 0.94815 0.94676 0.90167 0.93224 0.93220 0.90156 0.88476 0.94159 0.94769 0.92397 0.81255 0.84254 0.84350 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.46 11.01 101.05 1.11 1.57 16 2 O -0.37 -6.86 9.27 -48.36 -0.45 -7.31 16 3 C 0.04 0.72 6.28 37.16 0.23 0.95 16 4 C 0.13 2.27 5.86 -4.04 -0.02 2.24 16 5 N -0.59 -12.29 2.44 -176.24 -0.43 -12.72 16 6 C 0.23 5.29 4.67 -5.20 -0.02 5.27 16 7 C -0.54 -12.67 6.70 -34.44 -0.23 -12.90 16 8 H 0.07 1.53 7.66 -52.49 -0.40 1.13 16 9 C 0.07 1.68 5.46 -17.82 -0.10 1.58 16 10 N -0.88 -22.60 13.29 55.43 0.74 -21.87 16 11 Si 0.89 18.69 29.54 -169.99 -5.02 13.66 16 12 H -0.27 -5.60 7.11 56.52 0.40 -5.20 16 13 H -0.28 -5.85 7.11 56.52 0.40 -5.45 16 14 H -0.28 -6.03 7.11 56.52 0.40 -5.62 16 15 C 0.56 12.37 6.58 -12.39 -0.08 12.28 16 16 O -0.54 -12.87 15.39 -7.82 -0.12 -12.99 16 17 C -0.14 -2.82 4.53 -104.91 -0.48 -3.30 16 18 C -0.03 -0.47 7.85 -39.19 -0.31 -0.78 16 19 C -0.13 -1.96 10.03 -39.65 -0.40 -2.36 16 20 C -0.07 -1.04 9.82 -39.48 -0.39 -1.43 16 21 C -0.09 -1.52 6.32 -39.48 -0.25 -1.77 16 22 Cl -0.06 -0.93 28.61 -51.86 -1.48 -2.42 16 23 C 0.15 2.84 7.24 -38.93 -0.28 2.56 16 24 F -0.12 -2.44 16.19 2.25 0.04 -2.40 16 25 H 0.03 0.40 8.14 -51.93 -0.42 -0.02 16 26 H 0.03 0.47 8.14 -51.93 -0.42 0.05 16 27 H 0.08 1.07 8.14 -51.92 -0.42 0.65 16 28 H 0.05 0.68 8.14 -51.93 -0.42 0.25 16 29 H 0.05 0.83 8.14 -51.93 -0.42 0.41 16 30 H 0.08 1.48 7.50 -51.93 -0.39 1.09 16 31 H 0.10 1.61 8.07 -51.93 -0.42 1.20 16 32 H 0.04 0.98 6.24 -51.93 -0.32 0.66 16 33 H 0.03 0.82 8.12 -51.93 -0.42 0.40 16 34 H 0.27 6.52 8.31 -40.82 -0.34 6.18 16 35 H 0.17 3.30 5.41 -52.48 -0.28 3.02 16 36 H 0.14 1.79 8.06 -52.48 -0.42 1.37 16 37 H 0.14 1.57 8.06 -52.48 -0.42 1.14 16 LS Contribution 336.55 15.07 5.07 5.07 Total: -1.00 -28.60 336.55 -7.21 -35.80 By element: Atomic # 1 Polarization: 5.59 SS G_CDS: -4.33 Total: 1.25 kcal Atomic # 6 Polarization: 5.13 SS G_CDS: -1.21 Total: 3.92 kcal Atomic # 7 Polarization: -34.90 SS G_CDS: 0.31 Total: -34.59 kcal Atomic # 8 Polarization: -19.73 SS G_CDS: -0.57 Total: -20.30 kcal Atomic # 9 Polarization: -2.44 SS G_CDS: 0.04 Total: -2.40 kcal Atomic # 14 Polarization: 18.69 SS G_CDS: -5.02 Total: 13.66 kcal Atomic # 17 Polarization: -0.93 SS G_CDS: -1.48 Total: -2.42 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -28.60 -7.21 -35.80 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000130649167.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.046 kcal (2) G-P(sol) polarization free energy of solvation -28.599 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.206 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.805 kcal (6) G-S(sol) free energy of system = (1) + (5) -101.851 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds