Wall clock time and date at job start Tue Mar 31 2020 11:03:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.42900 * 113.99927 * 2 1 4 4 C 1.52998 * 109.47152 * 180.02562 * 3 2 1 5 5 N 1.46490 * 109.47282 * 64.99608 * 4 3 2 6 6 C 1.46501 * 119.99815 * 84.66678 * 5 4 3 7 7 C 1.50696 * 109.47423 * 82.55325 * 6 5 4 8 8 H 1.08005 * 120.00095 * 359.97438 * 7 6 5 9 9 C 1.37877 * 120.00082 * 180.02562 * 7 6 5 10 10 N 1.31516 * 120.00384 * 359.97438 * 9 7 6 11 11 Si 1.86809 * 119.99986 * 179.97438 * 9 7 6 12 12 H 1.48502 * 109.47172 * 59.99679 * 11 9 7 13 13 H 1.48496 * 109.46962 * 179.97438 * 11 9 7 14 14 H 1.48499 * 109.47076 * 299.99790 * 11 9 7 15 15 C 1.34774 * 120.00480 * 264.66466 * 5 4 3 16 16 O 1.21559 * 119.99684 * 4.49224 * 15 5 4 17 17 C 1.47796 * 120.00389 * 184.49437 * 15 5 4 18 18 C 1.39624 * 120.11451 * 49.15826 * 17 15 5 19 19 C 1.37900 * 119.91061 * 179.97438 * 18 17 15 20 20 C 1.38483 * 120.16114 * 0.02562 * 19 18 17 21 21 Cl 1.73600 * 119.87624 * 179.97438 * 20 19 18 22 22 C 1.38691 * 120.24100 * 0.02562 * 20 19 18 23 23 F 1.35101 * 119.95871 * 179.97438 * 22 20 19 24 24 C 1.38135 * 120.08368 * 359.69979 * 22 20 19 25 25 H 1.09000 * 109.46744 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.47070 * 299.99728 * 1 2 3 27 27 H 1.08996 * 109.46555 * 60.00458 * 1 2 3 28 28 H 1.09004 * 109.47056 * 60.00056 * 3 2 1 29 29 H 1.08999 * 109.46992 * 300.00216 * 3 2 1 30 30 H 1.09004 * 109.46723 * 304.99551 * 4 3 2 31 31 H 1.08999 * 109.47100 * 185.00454 * 4 3 2 32 32 H 1.09004 * 109.47237 * 202.55095 * 6 5 4 33 33 H 1.09000 * 109.47083 * 322.55072 * 6 5 4 34 34 H 0.96991 * 120.00418 * 179.97438 * 10 9 7 35 35 H 1.07993 * 120.04909 * 359.97438 * 18 17 15 36 36 H 1.08002 * 119.91657 * 180.02562 * 19 18 17 37 37 H 1.08001 * 120.08196 * 180.27307 * 24 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 3.5355 1.1847 -0.0006 5 7 3.9757 0.5644 -1.2526 6 6 4.1738 1.3879 -2.4480 7 6 5.5357 2.0309 -2.3950 8 1 6.1883 1.8452 -1.5547 9 6 5.9482 2.8572 -3.4188 10 7 5.1534 3.0839 -4.4418 11 14 7.6361 3.6549 -3.3527 12 1 8.6803 2.6003 -3.3000 13 1 7.8369 4.4895 -4.5645 14 1 7.7331 4.5086 -2.1415 15 6 4.1985 -0.7638 -1.3048 16 8 3.9564 -1.4591 -0.3376 17 6 4.7373 -1.3748 -2.5380 18 6 5.8588 -0.8236 -3.1608 19 6 6.3583 -1.3975 -4.3109 20 6 5.7500 -2.5187 -4.8498 21 17 6.3847 -3.2348 -6.2983 22 6 4.6351 -3.0710 -4.2372 23 9 4.0458 -4.1646 -4.7682 24 6 4.1297 -2.5077 -3.0816 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3632 0.5138 -0.8900 28 1 1.6886 1.8464 0.8900 29 1 1.6886 1.8464 -0.8900 30 1 3.8514 0.5683 0.8410 31 1 3.9785 2.1765 0.0890 32 1 4.1024 0.7611 -3.3369 33 1 3.4076 2.1622 -2.4868 34 1 5.4434 3.6655 -5.1618 35 1 6.3345 0.0510 -2.7424 36 1 7.2261 -0.9714 -4.7924 37 1 3.2641 -2.9404 -2.6021 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000152384568.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:35 Heat of formation + Delta-G solvation = -103.610015 kcal Electronic energy + Delta-G solvation = -24452.864011 eV Core-core repulsion = 20557.036653 eV Total energy + Delta-G solvation = -3895.827358 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -48.71851 -39.80050 -38.09720 -37.25340 -36.26302 -35.11673 -32.79060 -31.08417 -30.52111 -29.22419 -27.24600 -26.09051 -23.94134 -23.19877 -22.53204 -21.86303 -19.12997 -17.35395 -16.87896 -16.48882 -16.35490 -16.08619 -15.81810 -15.54009 -15.35868 -15.13059 -14.64237 -14.49427 -13.77306 -13.71011 -13.29091 -12.88408 -12.75335 -12.46414 -12.31585 -12.04390 -11.76636 -11.61599 -11.44878 -11.43900 -11.15969 -11.05060 -10.82025 -10.73321 -10.68870 -10.25913 -9.89910 -9.40706 -9.21075 -8.75196 -8.69813 -8.30473 -7.81925 -6.31870 -4.40840 1.02436 1.42239 2.15710 3.13855 3.20119 3.21545 3.25007 3.64219 3.95918 4.13611 4.21123 4.34645 4.92331 4.99151 5.13436 5.34962 5.39863 5.44084 5.50052 5.59407 5.62855 5.68023 5.79255 5.82464 5.95458 6.09491 6.23244 6.32050 6.51090 6.65312 6.67755 7.02720 7.10103 7.36983 7.51409 7.60313 7.89671 8.22380 8.63386 8.89310 9.26245 10.73683 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.008705 B = 0.006593 C = 0.004093 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 3215.679885 B = 4245.948661 C = 6838.693622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.032 3.968 2 O -0.373 6.373 3 C 0.045 3.955 4 C 0.123 3.877 5 N -0.585 5.585 6 C 0.233 3.767 7 C -0.548 4.548 8 H 0.065 0.935 9 C 0.071 3.929 10 N -0.880 5.880 11 Si 0.892 3.108 12 H -0.273 1.273 13 H -0.285 1.285 14 H -0.275 1.275 15 C 0.561 3.439 16 O -0.546 6.546 17 C -0.084 4.084 18 C -0.059 4.059 19 C -0.091 4.091 20 C -0.059 4.059 21 Cl -0.063 7.063 22 C 0.088 3.912 23 F -0.133 7.133 24 C -0.100 4.100 25 H 0.080 0.920 26 H 0.034 0.966 27 H 0.036 0.964 28 H 0.050 0.950 29 H 0.052 0.948 30 H 0.083 0.917 31 H 0.096 0.904 32 H 0.043 0.957 33 H 0.034 0.966 34 H 0.268 0.732 35 H 0.178 0.822 36 H 0.144 0.856 37 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.487 -5.092 1.819 5.951 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.291 6.291 3 C -0.033 4.033 4 C -0.001 4.001 5 N -0.315 5.315 6 C 0.113 3.887 7 C -0.586 4.586 8 H 0.083 0.917 9 C -0.134 4.134 10 N -0.516 5.516 11 Si 0.719 3.281 12 H -0.198 1.198 13 H -0.211 1.211 14 H -0.200 1.200 15 C 0.348 3.652 16 O -0.425 6.425 17 C -0.087 4.087 18 C -0.078 4.078 19 C -0.110 4.110 20 C -0.087 4.087 21 Cl -0.034 7.034 22 C 0.068 3.932 23 F -0.111 7.111 24 C -0.120 4.120 25 H 0.098 0.902 26 H 0.053 0.947 27 H 0.055 0.945 28 H 0.069 0.931 29 H 0.070 0.930 30 H 0.102 0.898 31 H 0.114 0.886 32 H 0.061 0.939 33 H 0.052 0.948 34 H 0.078 0.922 35 H 0.195 0.805 36 H 0.162 0.838 37 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges -2.499 -5.588 1.982 6.434 hybrid contribution 0.517 0.705 -0.550 1.033 sum -1.982 -4.884 1.432 5.462 Atomic orbital electron populations 1.22676 0.82363 1.02163 0.99302 1.88089 1.18387 1.27416 1.95208 1.23039 0.95291 0.85027 0.99970 1.21356 0.91236 0.99599 0.87894 1.48000 1.64093 1.06605 1.12778 1.19548 0.97030 0.90442 0.81704 1.21408 1.01020 1.29461 1.06718 0.91663 1.24943 0.97563 0.95812 0.95056 1.69906 1.36348 1.36318 1.09075 0.86651 0.83988 0.79762 0.77746 1.19774 1.21051 1.20005 1.18008 0.77922 0.82498 0.86776 1.90731 1.52773 1.61781 1.37231 1.19899 0.97098 0.95233 0.96494 1.22324 0.94246 0.98259 0.92923 1.20965 1.00549 0.93162 0.96280 1.21168 0.97092 0.98558 0.91873 1.98356 1.86041 1.83066 1.35923 1.17081 0.93925 0.87275 0.94941 1.91501 1.82994 1.50924 1.85711 1.21014 1.01206 0.95775 0.94029 0.90172 0.94698 0.94534 0.93143 0.92998 0.89842 0.88567 0.93867 0.94773 0.92201 0.80525 0.83843 0.83747 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.41 11.01 101.05 1.11 1.53 16 2 O -0.37 -6.46 9.95 -35.37 -0.35 -6.81 16 3 C 0.04 0.70 6.28 37.16 0.23 0.93 16 4 C 0.12 2.12 5.84 -4.05 -0.02 2.10 16 5 N -0.58 -11.66 2.42 -176.20 -0.43 -12.09 16 6 C 0.23 5.09 4.68 -5.19 -0.02 5.07 16 7 C -0.55 -12.57 6.59 -34.44 -0.23 -12.80 16 8 H 0.07 1.49 7.76 -52.48 -0.41 1.08 16 9 C 0.07 1.70 5.46 -17.82 -0.10 1.60 16 10 N -0.88 -22.36 13.29 55.43 0.74 -21.62 16 11 Si 0.89 18.68 29.54 -169.99 -5.02 13.66 16 12 H -0.27 -5.59 7.11 56.52 0.40 -5.19 16 13 H -0.29 -6.06 7.11 56.52 0.40 -5.66 16 14 H -0.27 -5.78 7.11 56.52 0.40 -5.37 16 15 C 0.56 11.56 6.97 -12.35 -0.09 11.48 16 16 O -0.55 -12.27 16.09 5.18 0.08 -12.19 16 17 C -0.08 -1.60 4.68 -104.97 -0.49 -2.09 16 18 C -0.06 -1.10 7.75 -39.19 -0.30 -1.40 16 19 C -0.09 -1.51 9.81 -39.61 -0.39 -1.90 16 20 C -0.06 -0.97 6.33 -39.32 -0.25 -1.22 16 21 Cl -0.06 -0.92 28.60 -51.86 -1.48 -2.40 16 22 C 0.09 1.48 7.26 -39.45 -0.29 1.19 16 23 F -0.13 -2.17 16.83 2.25 0.04 -2.13 16 24 C -0.10 -1.76 9.70 -39.12 -0.38 -2.14 16 25 H 0.08 0.95 8.14 -51.93 -0.42 0.52 16 26 H 0.03 0.38 8.14 -51.93 -0.42 -0.04 16 27 H 0.04 0.44 8.14 -51.93 -0.42 0.02 16 28 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 29 H 0.05 0.83 8.02 -51.93 -0.42 0.41 16 30 H 0.08 1.47 7.33 -51.93 -0.38 1.09 16 31 H 0.10 1.55 8.11 -51.93 -0.42 1.13 16 32 H 0.04 1.01 6.00 -51.93 -0.31 0.70 16 33 H 0.03 0.79 8.00 -51.93 -0.42 0.38 16 34 H 0.27 6.57 8.31 -40.82 -0.34 6.23 16 35 H 0.18 3.50 5.07 -52.49 -0.27 3.23 16 36 H 0.14 2.14 8.06 -52.49 -0.42 1.72 16 37 H 0.14 2.40 8.06 -52.49 -0.42 1.97 16 LS Contribution 337.69 15.07 5.09 5.09 Total: -1.00 -26.86 337.69 -6.84 -33.70 By element: Atomic # 1 Polarization: 6.74 SS G_CDS: -4.29 Total: 2.45 kcal Atomic # 6 Polarization: 3.56 SS G_CDS: -1.21 Total: 2.34 kcal Atomic # 7 Polarization: -34.02 SS G_CDS: 0.31 Total: -33.71 kcal Atomic # 8 Polarization: -18.73 SS G_CDS: -0.27 Total: -19.00 kcal Atomic # 9 Polarization: -2.17 SS G_CDS: 0.04 Total: -2.13 kcal Atomic # 14 Polarization: 18.68 SS G_CDS: -5.02 Total: 13.66 kcal Atomic # 17 Polarization: -0.92 SS G_CDS: -1.48 Total: -2.40 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -26.86 -6.84 -33.70 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000152384568.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.914 kcal (2) G-P(sol) polarization free energy of solvation -26.859 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.772 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.838 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.696 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.610 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds