Wall clock time and date at job start Tue Mar 31 2020 10:50:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 H 1.09008 * 109.46693 * 2 1 4 4 C 1.50694 * 109.47136 * 119.99377 * 2 1 3 5 5 H 1.08004 * 120.00056 * 120.00297 * 4 2 1 6 6 C 1.37883 * 120.00404 * 300.00583 * 4 2 1 7 7 N 1.31505 * 120.00303 * 179.97438 * 6 4 2 8 8 Si 1.86800 * 119.99796 * 359.97438 * 6 4 2 9 9 H 1.48501 * 109.47151 * 89.99983 * 8 6 4 10 10 H 1.48502 * 109.47206 * 210.00247 * 8 6 4 11 11 H 1.48505 * 109.47029 * 330.00272 * 8 6 4 12 12 N 1.46496 * 109.47235 * 239.99898 * 2 1 3 13 13 C 1.34778 * 119.99756 * 85.00017 * 12 2 1 14 14 O 1.21273 * 120.00712 * 359.97438 * 13 12 2 15 15 C 1.50707 * 119.99519 * 179.97438 * 13 12 2 16 16 H 1.09005 * 109.46876 * 60.00134 * 15 13 12 17 17 C 1.52996 * 109.47441 * 300.00027 * 15 13 12 18 18 O 1.42900 * 109.46967 * 179.97438 * 15 13 12 19 19 C 1.35972 * 117.00050 * 204.98850 * 18 15 13 20 20 C 1.38685 * 120.03089 * 354.51066 * 19 18 15 21 21 C 1.38158 * 119.97999 * 180.02562 * 20 19 18 22 22 C 1.38468 * 120.05354 * 359.97438 * 21 20 19 23 23 F 1.35098 * 119.96913 * 180.02562 * 22 21 20 24 24 C 1.38432 * 120.06334 * 0.02562 * 22 21 20 25 25 C 1.38259 * 120.02132 * 359.68257 * 24 22 21 26 26 Cl 1.73606 * 120.02803 * 180.32091 * 25 24 22 27 27 H 1.08998 * 109.46597 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47405 * 300.00227 * 1 2 3 29 29 H 1.08995 * 109.46876 * 60.00371 * 1 2 3 30 30 H 0.97000 * 119.99988 * 179.97438 * 7 6 4 31 31 H 0.96996 * 120.00019 * 264.99240 * 12 2 1 32 32 H 1.09004 * 109.47351 * 59.99519 * 17 15 13 33 33 H 1.08993 * 109.47181 * 179.97438 * 17 15 13 34 34 H 1.09004 * 109.46954 * 300.00430 * 17 15 13 35 35 H 1.08002 * 120.01072 * 0.02562 * 20 19 18 36 36 H 1.07997 * 119.97564 * 180.02562 * 21 20 19 37 37 H 1.08000 * 119.98939 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8933 1.0278 0.0000 4 6 2.0324 -0.7102 1.2305 5 1 2.6533 -1.5884 1.1315 6 6 1.6992 -0.2392 2.4828 7 7 2.1372 -0.8593 3.5566 8 14 0.6257 1.2799 2.6541 9 1 -0.8021 0.8745 2.6992 10 1 0.9770 1.9956 3.9070 11 1 0.8490 2.1774 1.4921 12 7 2.0184 -0.6906 -1.1961 13 6 2.1471 -0.0182 -2.3571 14 8 1.8583 1.1583 -2.4118 15 6 2.6501 -0.7286 -3.5874 16 1 1.9778 -1.5509 -3.8324 17 6 4.0527 -1.2785 -3.3213 18 8 2.6975 0.1894 -4.6815 19 6 2.6132 -0.3364 -5.9326 20 6 2.6022 -1.7120 -6.1080 21 6 2.5171 -2.2452 -7.3798 22 6 2.4421 -1.4071 -8.4794 23 9 2.3584 -1.9302 -9.7222 24 6 2.4529 -0.0336 -8.3066 25 6 2.5319 0.5030 -7.0349 26 17 2.5370 2.2253 -6.8174 27 1 -0.3632 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 1.9031 -0.5276 4.4376 31 1 2.2492 -1.6317 -1.1525 32 1 4.0162 -1.9788 -2.4868 33 1 4.4162 -1.7927 -4.2109 34 1 4.7249 -0.4562 -3.0762 35 1 2.6603 -2.3664 -5.2508 36 1 2.5082 -3.3164 -7.5163 37 1 2.3947 0.6190 -9.1652 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000171971344.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:50:12 Heat of formation + Delta-G solvation = -93.289642 kcal Electronic energy + Delta-G solvation = -23533.076392 eV Core-core repulsion = 19637.696559 eV Total energy + Delta-G solvation = -3895.379833 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -49.18976 -40.79611 -39.15558 -37.50201 -36.54903 -35.06494 -32.91936 -32.03427 -31.29891 -29.81246 -29.32090 -25.31974 -24.83974 -23.69256 -22.75916 -21.13010 -19.72905 -18.82690 -17.96275 -17.70105 -16.82314 -16.09891 -16.05850 -15.71829 -15.57668 -15.10785 -14.87879 -14.62323 -14.21259 -13.91802 -13.75002 -13.30717 -13.16682 -12.93852 -12.83884 -12.47414 -12.25715 -12.05212 -11.87801 -11.65435 -11.40123 -11.34951 -11.08213 -11.03917 -10.86736 -10.24653 -9.75678 -9.42263 -9.31090 -9.22538 -8.82461 -8.40408 -8.28939 -6.26827 -4.30134 0.57921 0.73785 1.86607 2.57004 2.98123 3.05318 3.19934 3.32568 3.36840 3.80714 3.92344 4.25202 4.26889 4.36767 4.53286 4.73268 4.79704 4.87787 5.01163 5.08281 5.14877 5.43020 5.46777 5.47753 5.63742 5.67145 5.96829 6.19944 6.24045 6.30366 6.48326 6.77744 6.91491 7.11344 7.17195 7.42518 8.03261 8.39614 8.66547 8.77257 9.33432 10.85120 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.025320 B = 0.003004 C = 0.002817 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1105.562518 B = 9317.858568 C = 9938.205241 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C 0.239 3.761 3 H 0.050 0.950 4 C -0.537 4.537 5 H 0.081 0.919 6 C 0.080 3.920 7 N -0.891 5.891 8 Si 0.884 3.116 9 H -0.276 1.276 10 H -0.293 1.293 11 H -0.261 1.261 12 N -0.695 5.695 13 C 0.508 3.492 14 O -0.528 6.528 15 C 0.062 3.938 16 H 0.098 0.902 17 C -0.177 4.177 18 O -0.266 6.266 19 C 0.139 3.861 20 C -0.176 4.176 21 C -0.105 4.105 22 C 0.067 3.933 23 F -0.136 7.136 24 C -0.107 4.107 25 C -0.045 4.045 26 Cl -0.036 7.036 27 H 0.054 0.946 28 H 0.049 0.951 29 H 0.036 0.964 30 H 0.268 0.732 31 H 0.396 0.604 32 H 0.086 0.914 33 H 0.071 0.929 34 H 0.078 0.922 35 H 0.151 0.849 36 H 0.145 0.855 37 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.632 -3.788 -22.401 22.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.221 4.221 2 C 0.136 3.864 3 H 0.068 0.932 4 C -0.575 4.575 5 H 0.099 0.901 6 C -0.124 4.124 7 N -0.527 5.527 8 Si 0.714 3.286 9 H -0.202 1.202 10 H -0.221 1.221 11 H -0.186 1.186 12 N -0.345 5.345 13 C 0.291 3.709 14 O -0.404 6.404 15 C 0.002 3.998 16 H 0.116 0.884 17 C -0.234 4.234 18 O -0.178 6.178 19 C 0.091 3.909 20 C -0.194 4.194 21 C -0.124 4.124 22 C 0.047 3.953 23 F -0.115 7.115 24 C -0.127 4.127 25 C -0.073 4.073 26 Cl -0.007 7.007 27 H 0.073 0.927 28 H 0.067 0.933 29 H 0.055 0.945 30 H 0.078 0.922 31 H 0.229 0.771 32 H 0.105 0.895 33 H 0.090 0.910 34 H 0.097 0.903 35 H 0.169 0.831 36 H 0.163 0.837 37 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 1.443 -2.581 -22.155 22.351 hybrid contribution -0.524 0.049 0.105 0.537 sum 0.919 -2.533 -22.049 22.213 Atomic orbital electron populations 1.22468 0.99178 1.00959 0.99496 1.19148 0.90202 0.94746 0.82320 0.93182 1.20997 1.33508 1.14542 0.88425 0.90105 1.24815 0.95437 0.96680 0.95497 1.69854 1.44749 1.40050 0.98092 0.86893 0.80543 0.83608 0.77586 1.20241 1.22069 1.18592 1.46092 1.65340 1.13847 1.09213 1.19834 0.79339 0.87664 0.84099 1.90720 1.49658 1.15488 1.84518 1.22464 0.99351 0.92020 0.85985 0.88445 1.22358 0.94976 1.02690 1.03413 1.86359 1.86394 1.34532 1.10491 1.18798 0.95582 0.91216 0.85254 1.21193 1.06459 0.93254 0.98531 1.21035 0.99695 1.00799 0.90850 1.17286 1.06908 0.91026 0.80068 1.91514 1.94054 1.86837 1.39067 1.20818 1.01473 0.93973 0.96412 1.19871 1.09297 0.86434 0.91707 1.98412 1.96773 1.08113 1.97435 0.92713 0.93290 0.94475 0.92192 0.77065 0.89539 0.91050 0.90310 0.83114 0.83732 0.83103 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.53 8.96 37.16 0.33 -3.20 16 2 C 0.24 5.48 2.15 -69.08 -0.15 5.33 16 3 H 0.05 1.28 6.63 -51.92 -0.34 0.94 16 4 C -0.54 -13.96 9.31 -34.44 -0.32 -14.28 16 5 H 0.08 2.19 7.98 -52.48 -0.42 1.77 16 6 C 0.08 2.18 5.45 -17.82 -0.10 2.08 16 7 N -0.89 -25.76 13.96 55.43 0.77 -24.99 16 8 Si 0.88 21.34 24.37 -169.99 -4.14 17.20 16 9 H -0.28 -6.44 6.87 56.52 0.39 -6.05 16 10 H -0.29 -7.08 7.11 56.52 0.40 -6.67 16 11 H -0.26 -6.29 6.53 56.52 0.37 -5.92 16 12 N -0.69 -12.79 4.96 -54.93 -0.27 -13.06 16 13 C 0.51 9.16 7.20 -10.98 -0.08 9.08 16 14 O -0.53 -11.94 16.16 -14.35 -0.23 -12.17 16 15 C 0.06 0.79 2.64 -27.88 -0.07 0.72 16 16 H 0.10 0.96 6.31 -51.93 -0.33 0.64 16 17 C -0.18 -1.83 9.07 37.16 0.34 -1.49 16 18 O -0.27 -3.86 8.79 -39.56 -0.35 -4.21 16 19 C 0.14 1.66 6.59 -39.21 -0.26 1.40 16 20 C -0.18 -1.57 8.24 -39.45 -0.33 -1.90 16 21 C -0.10 -0.85 10.02 -39.53 -0.40 -1.24 16 22 C 0.07 0.62 7.30 -39.43 -0.29 0.33 16 23 F -0.14 -1.31 17.27 2.25 0.04 -1.27 16 24 C -0.11 -1.03 9.80 -39.50 -0.39 -1.41 16 25 C -0.05 -0.53 6.33 -39.37 -0.25 -0.78 16 26 Cl -0.04 -0.46 28.50 -51.86 -1.48 -1.94 16 27 H 0.05 1.10 8.14 -51.93 -0.42 0.67 16 28 H 0.05 1.10 3.27 -51.93 -0.17 0.93 16 29 H 0.04 0.76 8.14 -51.93 -0.42 0.34 16 30 H 0.27 7.30 8.31 -40.82 -0.34 6.96 16 31 H 0.40 6.09 7.96 -40.82 -0.32 5.76 16 32 H 0.09 0.79 7.57 -51.93 -0.39 0.40 16 33 H 0.07 0.57 6.91 -51.93 -0.36 0.22 16 34 H 0.08 0.94 8.14 -51.93 -0.42 0.52 16 35 H 0.15 1.03 5.42 -52.49 -0.28 0.75 16 36 H 0.14 0.81 8.06 -52.49 -0.42 0.39 16 37 H 0.15 1.16 8.06 -52.49 -0.42 0.74 16 LS Contribution 328.50 15.07 4.95 4.95 Total: -1.00 -31.89 328.50 -6.58 -38.47 By element: Atomic # 1 Polarization: 6.29 SS G_CDS: -3.92 Total: 2.37 kcal Atomic # 6 Polarization: -3.40 SS G_CDS: -1.95 Total: -5.36 kcal Atomic # 7 Polarization: -38.55 SS G_CDS: 0.50 Total: -38.05 kcal Atomic # 8 Polarization: -15.80 SS G_CDS: -0.58 Total: -16.38 kcal Atomic # 9 Polarization: -1.31 SS G_CDS: 0.04 Total: -1.27 kcal Atomic # 14 Polarization: 21.34 SS G_CDS: -4.14 Total: 17.20 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -1.48 Total: -1.94 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -31.89 -6.58 -38.47 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000171971344.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.821 kcal (2) G-P(sol) polarization free energy of solvation -31.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.709 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.469 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.290 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds