Wall clock time and date at job start Tue Mar 31 2020 11:03:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34232 * 116.99513 * 2 1 4 4 O 1.20825 * 120.00326 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99244 * 180.02562 * 3 2 1 6 6 N 1.46503 * 109.46837 * 179.97438 * 5 3 2 7 7 C 1.36940 * 120.00127 * 269.20406 * 6 5 3 8 8 H 1.07997 * 120.00025 * 189.27715 * 7 6 5 9 9 C 1.38817 * 119.99784 * 9.27996 * 7 6 5 10 10 N 1.31616 * 119.99978 * 24.74892 * 9 7 6 11 11 Si 1.86802 * 119.99824 * 204.75039 * 9 7 6 12 12 H 1.48501 * 109.46914 * 89.99897 * 11 9 7 13 13 H 1.48496 * 109.46856 * 209.99856 * 11 9 7 14 14 H 1.48499 * 109.47009 * 330.00191 * 11 9 7 15 15 C 1.46501 * 120.00165 * 89.20021 * 6 5 3 16 16 C 1.52994 * 109.47456 * 270.00332 * 15 6 5 17 17 C 1.50704 * 109.47377 * 179.97438 * 16 15 6 18 18 C 1.38459 * 120.01724 * 89.99975 * 17 16 15 19 19 F 1.35092 * 120.02304 * 359.97438 * 18 17 16 20 20 C 1.38451 * 119.96016 * 179.97438 * 18 17 16 21 21 C 1.38226 * 119.99692 * 359.97438 * 20 18 17 22 22 C 1.38195 * 120.04366 * 0.02562 * 21 20 18 23 23 C 1.38294 * 120.01804 * 269.72733 * 17 16 15 24 24 Cl 1.73596 * 120.00202 * 359.97438 * 23 17 16 25 25 H 1.08995 * 109.47597 * 60.00193 * 1 2 3 26 26 H 1.09002 * 109.47372 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47368 * 299.99803 * 1 2 3 28 28 H 1.08993 * 109.47512 * 60.00117 * 5 3 2 29 29 H 1.08994 * 109.47094 * 299.99213 * 5 3 2 30 30 H 0.96998 * 119.99718 * 179.97438 * 10 9 7 31 31 H 1.09004 * 109.47025 * 30.00450 * 15 6 5 32 32 H 1.08997 * 109.47418 * 150.00128 * 15 6 5 33 33 H 1.09004 * 109.47100 * 300.00072 * 16 15 6 34 34 H 1.08997 * 109.47476 * 59.99690 * 16 15 6 35 35 H 1.07992 * 120.00040 * 179.97438 * 20 18 17 36 36 H 1.08000 * 119.97574 * 180.02562 * 21 20 18 37 37 H 1.08002 * 119.98489 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5662 1.2749 -0.0006 6 7 3.9816 2.6798 -0.0011 7 6 4.1911 3.3314 -1.1871 8 1 4.6390 4.3142 -1.1915 9 6 3.8277 2.7289 -2.3837 10 7 2.8830 1.8126 -2.3989 11 14 4.6796 3.2185 -3.9725 12 1 5.8675 2.3528 -4.1843 13 1 3.7386 3.0547 -5.1095 14 1 5.1101 4.6371 -3.8865 15 6 4.1728 3.3876 1.2673 16 6 2.8562 4.0429 1.6892 17 6 3.0528 4.7705 2.9942 18 6 3.4455 6.0982 2.9947 19 9 3.6532 6.7421 1.8254 20 6 3.6252 6.7656 4.1944 21 6 3.4120 6.1066 5.3905 22 6 3.0201 4.7814 5.3901 23 6 2.8356 4.1140 4.1919 24 17 2.3357 2.4515 4.1923 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8900 28 1 3.9556 0.7810 -0.8908 29 1 3.9562 0.7807 0.8892 30 1 2.6289 1.3918 -3.2351 31 1 4.4887 2.6802 2.0341 32 1 4.9372 4.1547 1.1437 33 1 2.5404 4.7503 0.9224 34 1 2.0918 3.2758 1.8128 35 1 3.9318 7.8011 4.1955 36 1 3.5519 6.6277 6.3261 37 1 2.8542 4.2672 6.3253 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000177622461.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:03:52 Heat of formation + Delta-G solvation = -85.613523 kcal Electronic energy + Delta-G solvation = -24737.754440 eV Core-core repulsion = 20842.707469 eV Total energy + Delta-G solvation = -3895.046972 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -48.69448 -39.22923 -38.86737 -36.31807 -36.21488 -34.57381 -33.15463 -31.06125 -30.36391 -28.61228 -27.36745 -25.94044 -24.18224 -22.73594 -21.86968 -20.58813 -19.63919 -17.59210 -16.97463 -16.55094 -16.21151 -15.90402 -15.48568 -15.32977 -15.05493 -14.66166 -14.61917 -13.80647 -13.74396 -13.41347 -13.18336 -12.96156 -12.51462 -12.37994 -12.12408 -11.80037 -11.67656 -11.31795 -11.24832 -11.22847 -11.03615 -10.90476 -10.62967 -10.49587 -10.12856 -9.96882 -9.85446 -9.50127 -9.15027 -8.69037 -8.61422 -8.46930 -7.11557 -5.93709 -3.19452 1.02613 1.14364 2.19526 3.37200 3.44371 3.46095 3.47442 3.91561 4.08715 4.34752 4.46781 4.72350 4.88028 4.92441 5.20024 5.28272 5.38065 5.62685 5.81871 5.82440 5.89100 5.94657 6.10195 6.11402 6.14825 6.17635 6.23551 6.33346 6.42930 6.67630 6.77675 6.86329 7.08009 7.17308 7.69885 7.82284 8.15336 9.01675 9.42506 9.71126 10.11699 11.17575 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.013367 B = 0.005594 C = 0.004224 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2094.133311 B = 5003.771526 C = 6627.739417 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.043 3.957 2 O -0.383 6.383 3 C 0.466 3.534 4 O -0.503 6.503 5 C 0.187 3.813 6 N -0.563 5.563 7 C -0.251 4.251 8 H 0.083 0.917 9 C 0.001 3.999 10 N -0.902 5.902 11 Si 0.909 3.091 12 H -0.286 1.286 13 H -0.293 1.293 14 H -0.280 1.280 15 C 0.158 3.842 16 C -0.111 4.111 17 C -0.091 4.091 18 C 0.109 3.891 19 F -0.127 7.127 20 C -0.150 4.150 21 C -0.098 4.098 22 C -0.121 4.121 23 C -0.015 4.015 24 Cl -0.055 7.055 25 H 0.052 0.948 26 H 0.078 0.922 27 H 0.044 0.956 28 H 0.115 0.885 29 H 0.052 0.948 30 H 0.258 0.742 31 H 0.044 0.956 32 H 0.052 0.948 33 H 0.080 0.920 34 H 0.092 0.908 35 H 0.136 0.864 36 H 0.136 0.864 37 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.186 2.394 14.916 15.108 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 O -0.301 6.301 3 C 0.306 3.694 4 O -0.388 6.388 5 C 0.057 3.943 6 N -0.281 5.281 7 C -0.379 4.379 8 H 0.101 0.899 9 C -0.197 4.197 10 N -0.547 5.547 11 Si 0.739 3.261 12 H -0.213 1.213 13 H -0.220 1.220 14 H -0.205 1.205 15 C 0.031 3.969 16 C -0.150 4.150 17 C -0.094 4.094 18 C 0.089 3.911 19 F -0.106 7.106 20 C -0.169 4.169 21 C -0.117 4.117 22 C -0.140 4.140 23 C -0.042 4.042 24 Cl -0.026 7.026 25 H 0.071 0.929 26 H 0.097 0.903 27 H 0.063 0.937 28 H 0.133 0.867 29 H 0.070 0.930 30 H 0.068 0.932 31 H 0.062 0.938 32 H 0.071 0.929 33 H 0.099 0.901 34 H 0.110 0.890 35 H 0.154 0.846 36 H 0.154 0.846 37 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.109 2.504 14.680 14.892 hybrid contribution -0.292 0.415 -1.220 1.321 sum -0.402 2.919 13.460 13.779 Atomic orbital electron populations 1.22830 0.80031 1.01169 1.01165 1.86551 1.20813 1.36933 1.85790 1.25526 0.93475 0.80193 0.70164 1.90445 1.66622 1.36290 1.45472 1.20509 0.85640 0.86586 1.01534 1.44320 1.74888 1.07121 1.01769 1.19360 1.33616 1.02197 0.82747 0.89902 1.24760 0.97365 0.99559 0.98024 1.69844 1.27492 1.30992 1.26398 0.86158 0.79080 0.78145 0.82700 1.21332 1.21983 1.20488 1.20908 0.93545 0.94823 0.87605 1.21615 1.02649 1.00454 0.90318 1.20279 0.99109 0.92828 0.97141 1.17403 1.01789 0.90243 0.81663 1.91539 1.92192 1.80906 1.45940 1.21200 1.03360 1.01151 0.91229 1.20800 0.99437 0.93788 0.97635 1.21043 1.01305 0.94905 0.96775 1.20595 1.02870 0.86975 0.93767 1.98381 1.89397 1.16098 1.98729 0.92902 0.90301 0.93748 0.86747 0.93045 0.93188 0.93767 0.92915 0.90133 0.89010 0.84569 0.84576 0.84732 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.78 10.56 101.05 1.07 1.85 16 2 O -0.38 -8.44 10.57 -39.26 -0.41 -8.86 16 3 C 0.47 11.35 5.95 36.01 0.21 11.56 16 4 O -0.50 -13.48 13.41 -18.75 -0.25 -13.74 16 5 C 0.19 4.37 5.58 -5.19 -0.03 4.34 16 6 N -0.56 -13.65 2.09 -174.61 -0.37 -14.02 16 7 C -0.25 -6.68 9.70 -15.06 -0.15 -6.83 16 8 H 0.08 2.20 7.93 -52.49 -0.42 1.78 16 9 C 0.00 0.02 4.89 -17.43 -0.09 -0.07 16 10 N -0.90 -25.33 9.02 55.49 0.50 -24.83 16 11 Si 0.91 21.57 29.62 -169.99 -5.04 16.54 16 12 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 13 H -0.29 -7.13 7.11 56.52 0.40 -6.73 16 14 H -0.28 -6.57 7.11 56.52 0.40 -6.17 16 15 C 0.16 3.28 5.69 -4.04 -0.02 3.25 16 16 C -0.11 -2.25 4.35 -27.88 -0.12 -2.37 16 17 C -0.09 -1.52 5.14 -104.52 -0.54 -2.06 16 18 C 0.11 1.69 7.24 -39.42 -0.29 1.41 16 19 F -0.13 -2.22 16.48 2.25 0.04 -2.18 16 20 C -0.15 -1.79 10.03 -39.51 -0.40 -2.18 16 21 C -0.10 -1.00 10.04 -39.60 -0.40 -1.39 16 22 C -0.12 -1.39 9.83 -39.54 -0.39 -1.78 16 23 C -0.01 -0.22 6.31 -39.51 -0.25 -0.47 16 24 Cl -0.06 -0.82 27.29 -51.86 -1.42 -2.24 16 25 H 0.05 1.03 8.13 -51.93 -0.42 0.61 16 26 H 0.08 1.13 8.14 -51.93 -0.42 0.70 16 27 H 0.04 0.77 8.13 -51.93 -0.42 0.35 16 28 H 0.11 2.88 6.29 -51.93 -0.33 2.55 16 29 H 0.05 1.04 7.90 -51.93 -0.41 0.63 16 30 H 0.26 7.14 8.31 -40.82 -0.34 6.80 16 31 H 0.04 0.83 7.90 -51.93 -0.41 0.42 16 32 H 0.05 1.08 8.03 -51.93 -0.42 0.66 16 33 H 0.08 1.87 7.64 -51.93 -0.40 1.48 16 34 H 0.09 2.00 5.05 -51.93 -0.26 1.74 16 35 H 0.14 1.29 8.06 -52.49 -0.42 0.87 16 36 H 0.14 0.92 8.06 -52.49 -0.42 0.50 16 37 H 0.13 1.21 8.06 -52.49 -0.42 0.79 16 LS Contribution 332.74 15.07 5.01 5.01 Total: -1.00 -30.76 332.74 -7.62 -38.38 By element: Atomic # 1 Polarization: 4.98 SS G_CDS: -4.31 Total: 0.67 kcal Atomic # 6 Polarization: 6.64 SS G_CDS: -1.38 Total: 5.27 kcal Atomic # 7 Polarization: -38.98 SS G_CDS: 0.13 Total: -38.85 kcal Atomic # 8 Polarization: -21.93 SS G_CDS: -0.67 Total: -22.59 kcal Atomic # 9 Polarization: -2.22 SS G_CDS: 0.04 Total: -2.18 kcal Atomic # 14 Polarization: 21.57 SS G_CDS: -5.04 Total: 16.54 kcal Atomic # 17 Polarization: -0.82 SS G_CDS: -1.42 Total: -2.24 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -30.76 -7.62 -38.38 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000177622461.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.235 kcal (2) G-P(sol) polarization free energy of solvation -30.760 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -77.995 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.619 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.379 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.614 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds