Wall clock time and date at job start Tue Mar 31 2020 10:38:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.52997 * 109.47236 * 2 1 4 4 H 1.09002 * 109.47153 * 304.99767 * 3 2 1 5 5 C 1.50699 * 109.47078 * 184.99974 * 3 2 1 6 6 H 1.08000 * 119.99792 * 239.99917 * 5 3 2 7 7 C 1.37878 * 119.99902 * 59.99463 * 5 3 2 8 8 N 1.31515 * 120.00126 * 0.02562 * 7 5 3 9 9 Si 1.86803 * 119.99745 * 180.02562 * 7 5 3 10 10 H 1.48500 * 109.47256 * 90.00491 * 9 7 5 11 11 H 1.48506 * 109.46930 * 210.00332 * 9 7 5 12 12 H 1.48499 * 109.47104 * 330.00193 * 9 7 5 13 13 N 1.46505 * 109.47212 * 64.99775 * 3 2 1 14 14 C 1.34769 * 119.99798 * 274.99913 * 13 3 2 15 15 O 1.21280 * 120.00742 * 0.02562 * 14 13 3 16 16 C 1.50705 * 119.99510 * 179.97438 * 14 13 3 17 17 O 1.42904 * 109.47077 * 180.02562 * 16 14 13 18 18 C 1.35971 * 117.00037 * 180.02562 * 17 16 14 19 19 C 1.38681 * 120.03616 * 359.72411 * 18 17 16 20 20 C 1.38158 * 119.98232 * 179.74654 * 19 18 17 21 21 C 1.38465 * 120.04864 * 0.55479 * 20 19 18 22 22 F 1.35100 * 119.96473 * 179.72225 * 21 20 19 23 23 C 1.38431 * 120.07239 * 359.69726 * 21 20 19 24 24 C 1.38268 * 120.01387 * 0.02562 * 23 21 20 25 25 Cl 1.73602 * 120.02195 * 179.97438 * 24 23 21 26 26 H 1.09000 * 109.47403 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.46917 * 300.00567 * 1 2 3 28 28 H 1.09004 * 109.46741 * 59.99889 * 1 2 3 29 29 H 1.09001 * 109.46917 * 239.99433 * 2 1 3 30 30 H 1.09004 * 109.46741 * 120.00111 * 2 1 3 31 31 H 0.96999 * 120.00073 * 179.97438 * 8 7 5 32 32 H 0.97005 * 119.99239 * 94.99888 * 13 3 2 33 33 H 1.08995 * 109.47765 * 299.99977 * 16 14 13 34 34 H 1.09000 * 109.47068 * 60.00791 * 16 14 13 35 35 H 1.08004 * 120.00249 * 0.02838 * 19 18 17 36 36 H 1.07992 * 119.97011 * 180.27703 * 20 19 18 37 37 H 1.07997 * 119.99593 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 1 1.6055 1.9815 -0.8418 5 6 3.5419 1.4442 -0.1238 6 1 4.1472 1.8888 0.6523 7 6 4.1433 0.8782 -1.2279 8 7 3.4062 0.3372 -2.1732 9 14 6.0050 0.8798 -1.3810 10 1 6.5539 -0.3523 -0.7597 11 1 6.3836 0.9211 -2.8164 12 1 6.5576 2.0717 -0.6888 13 7 1.6525 2.0975 1.2518 14 6 0.4352 2.6644 1.3669 15 8 -0.3395 2.6320 0.4344 16 6 0.0364 3.3377 2.6548 17 8 -1.2892 3.8570 2.5302 18 6 -1.8044 4.5002 3.6117 19 6 -1.0515 4.6234 4.7698 20 6 -1.5740 5.2817 5.8663 21 6 -2.8534 5.8087 5.8137 22 9 -3.3648 6.4473 6.8889 23 6 -3.6088 5.6824 4.6606 24 6 -3.0864 5.0291 3.5597 25 17 -4.0338 4.8700 2.1137 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5139 -0.8900 29 1 1.8933 -0.5139 -0.8899 30 1 1.8933 -0.5139 0.8900 31 1 3.8292 -0.0607 -2.9502 32 1 2.2720 2.1231 1.9978 33 1 0.0673 2.6131 3.4684 34 1 0.7277 4.1530 2.8678 35 1 -0.0551 4.2087 4.8129 36 1 -0.9859 5.3815 6.7665 37 1 -4.6064 6.0943 4.6208 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000183871684.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:38:36 Heat of formation + Delta-G solvation = -102.443268 kcal Electronic energy + Delta-G solvation = -23301.285799 eV Core-core repulsion = 19405.509035 eV Total energy + Delta-G solvation = -3895.776764 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.17027 -40.54575 -39.03228 -37.41787 -36.51637 -35.07062 -32.51809 -31.47511 -31.16478 -30.05332 -28.26564 -26.63126 -23.65638 -23.06964 -22.58874 -20.51744 -19.47153 -18.75743 -17.76155 -17.65058 -16.75544 -16.46832 -15.84381 -15.65014 -15.40488 -15.13462 -14.75933 -14.42199 -14.37989 -13.92221 -13.67252 -13.26821 -13.06808 -12.72996 -12.46343 -12.12644 -11.69055 -11.51898 -11.48049 -11.30357 -11.06697 -11.04933 -11.02900 -10.86028 -10.36973 -10.24589 -9.68517 -9.39001 -9.15570 -9.07960 -8.56420 -8.39134 -7.94687 -6.17963 -4.28122 0.60362 0.76655 1.89816 2.64092 3.05212 3.18036 3.20655 3.28013 3.29548 3.90718 4.03328 4.27582 4.35153 4.41600 4.63911 4.90914 4.95539 5.06757 5.13741 5.15807 5.32371 5.48231 5.65925 5.67825 6.21727 6.35355 6.41239 6.61129 6.92919 6.98822 7.15303 7.28326 7.34439 7.55319 7.65238 7.82747 8.11399 8.51877 8.69615 8.98350 9.39131 10.87323 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.023658 B = 0.002796 C = 0.002601 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1183.272234 B =10013.491214 C =10763.683472 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.128 4.128 3 C 0.273 3.727 4 H 0.051 0.949 5 C -0.536 4.536 6 H 0.062 0.938 7 C 0.067 3.933 8 N -0.881 5.881 9 Si 0.902 3.098 10 H -0.279 1.279 11 H -0.285 1.285 12 H -0.274 1.274 13 N -0.703 5.703 14 C 0.502 3.498 15 O -0.520 6.520 16 C 0.034 3.966 17 O -0.269 6.269 18 C 0.138 3.862 19 C -0.174 4.174 20 C -0.105 4.105 21 C 0.066 3.934 22 F -0.136 7.136 23 C -0.107 4.107 24 C -0.045 4.045 25 Cl -0.035 7.035 26 H 0.024 0.976 27 H 0.037 0.963 28 H 0.050 0.950 29 H 0.100 0.900 30 H 0.032 0.968 31 H 0.265 0.735 32 H 0.389 0.611 33 H 0.090 0.910 34 H 0.091 0.909 35 H 0.150 0.850 36 H 0.144 0.856 37 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.433 8.540 16.141 20.553 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.167 4.167 3 C 0.172 3.828 4 H 0.069 0.931 5 C -0.575 4.575 6 H 0.080 0.920 7 C -0.136 4.136 8 N -0.518 5.518 9 Si 0.729 3.271 10 H -0.205 1.205 11 H -0.210 1.210 12 H -0.199 1.199 13 N -0.353 5.353 14 C 0.285 3.715 15 O -0.396 6.396 16 C -0.045 4.045 17 O -0.180 6.180 18 C 0.090 3.910 19 C -0.193 4.193 20 C -0.124 4.124 21 C 0.046 3.954 22 F -0.115 7.115 23 C -0.127 4.127 24 C -0.073 4.073 25 Cl -0.006 7.006 26 H 0.043 0.957 27 H 0.056 0.944 28 H 0.069 0.931 29 H 0.118 0.882 30 H 0.050 0.950 31 H 0.075 0.925 32 H 0.221 0.779 33 H 0.108 0.892 34 H 0.109 0.891 35 H 0.167 0.833 36 H 0.162 0.838 37 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges -10.160 8.373 14.941 19.914 hybrid contribution 1.322 0.052 0.573 1.442 sum -8.838 8.425 15.514 19.743 Atomic orbital electron populations 1.21849 0.98247 0.98191 1.01270 1.21953 0.92653 0.99686 1.02403 1.18842 0.94301 0.89171 0.80520 0.93114 1.21200 0.90522 1.39329 1.06428 0.92016 1.24887 0.98672 0.94748 0.95336 1.69890 1.35204 1.37377 1.09314 0.86444 0.84741 0.78441 0.77452 1.20528 1.21042 1.19851 1.46394 1.13885 1.56101 1.18969 1.19680 0.83537 0.80268 0.88052 1.90746 1.50901 1.58331 1.39660 1.22812 0.82792 0.99295 0.99620 1.86328 1.30423 1.67905 1.33337 1.18816 0.91699 0.93061 0.87426 1.21145 1.01613 1.04314 0.92236 1.21027 0.94026 0.97582 0.99793 1.17285 0.93419 1.00118 0.84536 1.91513 1.87145 1.79707 1.53142 1.20818 1.01305 1.00036 0.90512 1.19874 0.91523 1.04919 0.90996 1.98415 1.70754 1.96520 1.34932 0.95733 0.94370 0.93063 0.88171 0.94952 0.92461 0.77864 0.89231 0.89134 0.83284 0.83775 0.83100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.02 8.52 37.16 0.32 -2.71 16 2 C -0.13 -3.00 5.45 -26.73 -0.15 -3.15 16 3 C 0.27 6.54 2.24 -69.08 -0.15 6.39 16 4 H 0.05 1.43 7.58 -51.93 -0.39 1.04 16 5 C -0.54 -13.54 8.73 -34.44 -0.30 -13.84 16 6 H 0.06 1.47 7.74 -52.49 -0.41 1.07 16 7 C 0.07 1.74 5.29 -17.82 -0.09 1.65 16 8 N -0.88 -24.07 11.29 55.43 0.63 -23.44 16 9 Si 0.90 19.98 29.54 -169.99 -5.02 14.96 16 10 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 11 H -0.28 -6.36 7.11 56.52 0.40 -5.96 16 12 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 13 N -0.70 -13.33 5.02 -54.93 -0.28 -13.60 16 14 C 0.50 9.25 6.48 -10.99 -0.07 9.18 16 15 O -0.52 -11.93 13.64 -14.35 -0.20 -12.13 16 16 C 0.03 0.43 5.22 36.01 0.19 0.62 16 17 O -0.27 -3.99 9.13 -39.56 -0.36 -4.35 16 18 C 0.14 1.67 6.68 -39.21 -0.26 1.41 16 19 C -0.17 -1.58 9.04 -39.45 -0.36 -1.94 16 20 C -0.11 -0.87 10.02 -39.53 -0.40 -1.27 16 21 C 0.07 0.62 7.30 -39.43 -0.29 0.34 16 22 F -0.14 -1.33 17.27 2.25 0.04 -1.29 16 23 C -0.11 -1.05 9.80 -39.50 -0.39 -1.43 16 24 C -0.05 -0.54 6.33 -39.37 -0.25 -0.79 16 25 Cl -0.04 -0.46 28.50 -51.86 -1.48 -1.94 16 26 H 0.02 0.48 8.14 -51.93 -0.42 0.05 16 27 H 0.04 0.81 5.64 -51.93 -0.29 0.51 16 28 H 0.05 1.21 7.85 -51.93 -0.41 0.80 16 29 H 0.10 2.62 5.95 -51.93 -0.31 2.31 16 30 H 0.03 0.72 8.14 -51.93 -0.42 0.29 16 31 H 0.27 6.90 8.31 -40.82 -0.34 6.57 16 32 H 0.39 6.07 8.54 -40.82 -0.35 5.72 16 33 H 0.09 0.88 7.65 -51.93 -0.40 0.48 16 34 H 0.09 0.91 7.67 -51.93 -0.40 0.51 16 35 H 0.15 1.00 6.30 -52.48 -0.33 0.67 16 36 H 0.14 0.83 8.06 -52.49 -0.42 0.41 16 37 H 0.15 1.19 8.06 -52.49 -0.42 0.76 16 LS Contribution 332.42 15.07 5.01 5.01 Total: -1.00 -30.39 332.42 -7.97 -38.36 By element: Atomic # 1 Polarization: 8.07 SS G_CDS: -4.11 Total: 3.96 kcal Atomic # 6 Polarization: -3.34 SS G_CDS: -2.20 Total: -5.54 kcal Atomic # 7 Polarization: -37.39 SS G_CDS: 0.35 Total: -37.04 kcal Atomic # 8 Polarization: -15.92 SS G_CDS: -0.56 Total: -16.48 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 0.04 Total: -1.29 kcal Atomic # 14 Polarization: 19.98 SS G_CDS: -5.02 Total: 14.96 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -1.48 Total: -1.94 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -30.39 -7.97 -38.36 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000183871684.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.082 kcal (2) G-P(sol) polarization free energy of solvation -30.394 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -94.475 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.361 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.443 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds