Wall clock time and date at job start Tue Mar 31 2020 10:38:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53004 * 109.46665 * 2 1 4 4 H 1.09000 * 109.46815 * 54.28334 * 3 2 1 5 5 C 1.50698 * 109.46997 * 174.27857 * 3 2 1 6 6 H 1.07998 * 120.00113 * 114.30626 * 5 3 2 7 7 C 1.37885 * 120.00206 * 294.30516 * 5 3 2 8 8 N 1.31513 * 119.99776 * 153.95278 * 7 5 3 9 9 Si 1.86797 * 120.00069 * 333.95752 * 7 5 3 10 10 H 1.48494 * 109.47271 * 179.97438 * 9 7 5 11 11 H 1.48505 * 109.46948 * 300.00130 * 9 7 5 12 12 H 1.48501 * 109.47041 * 59.99513 * 9 7 5 13 13 N 1.46491 * 109.47275 * 294.27990 * 3 2 1 14 14 C 1.34781 * 119.99991 * 84.99959 * 13 3 2 15 15 O 1.21283 * 120.00070 * 0.02562 * 14 13 3 16 16 C 1.50705 * 119.99955 * 179.97438 * 14 13 3 17 17 O 1.42902 * 109.47131 * 179.97438 * 16 14 13 18 18 C 1.35940 * 116.99923 * 180.02562 * 17 16 14 19 19 C 1.38733 * 120.02360 * 180.02562 * 18 17 16 20 20 C 1.38140 * 119.99323 * 180.02562 * 19 18 17 21 21 C 1.38440 * 120.04559 * 359.97438 * 20 19 18 22 22 F 1.35095 * 119.97798 * 179.97438 * 21 20 19 23 23 C 1.38548 * 120.04506 * 359.97438 * 21 20 19 24 24 Cl 1.73604 * 119.99239 * 180.02562 * 23 21 20 25 25 C 1.38269 * 120.00992 * 359.73292 * 23 21 20 26 26 H 1.08998 * 109.47068 * 299.99087 * 1 2 3 27 27 H 1.08994 * 109.47343 * 60.00014 * 1 2 3 28 28 H 1.09005 * 109.46581 * 180.02562 * 1 2 3 29 29 H 1.08993 * 109.47072 * 240.00417 * 2 1 3 30 30 H 1.08994 * 109.47343 * 119.99986 * 2 1 3 31 31 H 0.96993 * 119.99970 * 354.96768 * 8 7 5 32 32 H 0.97000 * 120.00810 * 264.99777 * 13 3 2 33 33 H 1.08999 * 109.47161 * 300.00319 * 16 14 13 34 34 H 1.08996 * 109.46861 * 60.00556 * 16 14 13 35 35 H 1.08004 * 119.99960 * 0.02562 * 19 18 17 36 36 H 1.08004 * 119.98201 * 180.02562 * 20 19 18 37 37 H 1.07996 * 120.02143 * 180.27413 * 25 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 1 1.5953 1.9850 0.8344 5 6 3.5402 1.4450 0.1416 6 1 4.1585 1.8023 -0.6685 7 6 4.1236 0.9911 1.3056 8 7 5.3469 0.5087 1.2833 9 14 3.1764 1.0612 2.9141 10 1 4.0190 0.5167 4.0089 11 1 2.8198 2.4705 3.2175 12 1 1.9372 0.2518 2.7945 13 7 1.6672 2.0923 -1.2590 14 6 0.4513 2.6586 -1.3909 15 8 -0.3341 2.6307 -0.4672 16 6 0.0681 3.3275 -2.6859 17 8 -1.2589 3.8468 -2.5793 18 6 -1.7612 4.4852 -3.6693 19 6 -3.0433 5.0141 -3.6345 20 6 -3.5533 5.6623 -4.7427 21 6 -2.7856 5.7849 -5.8882 22 9 -3.2859 6.4185 -6.9714 23 6 -1.5047 5.2582 -5.9246 24 17 -0.5431 5.4134 -7.3616 25 6 -0.9899 4.6144 -4.8145 26 1 -0.3633 0.5137 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 -0.3633 -1.0277 0.0005 29 1 1.8933 -0.5137 -0.8900 30 1 1.8934 -0.5138 0.8899 31 1 5.8116 0.4042 0.4384 32 1 2.2954 2.1150 -1.9977 33 1 0.7620 4.1421 -2.8933 34 1 0.1091 2.6000 -3.4965 35 1 -3.6425 4.9192 -2.7409 36 1 -4.5512 6.0744 -4.7152 37 1 0.0102 4.2077 -4.8411 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000183933467.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:38:38 Heat of formation + Delta-G solvation = -103.805544 kcal Electronic energy + Delta-G solvation = -23242.603891 eV Core-core repulsion = 19346.768055 eV Total energy + Delta-G solvation = -3895.835837 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -49.20471 -40.63889 -39.22361 -37.69211 -36.71864 -35.27657 -32.61402 -31.75223 -31.45568 -30.16876 -28.43104 -26.83488 -23.67879 -22.81911 -22.39712 -20.80882 -19.68714 -18.86421 -18.08720 -17.75263 -17.21404 -16.56838 -16.15747 -15.97368 -15.68681 -15.34869 -14.66674 -14.35546 -14.27508 -13.70441 -13.50129 -13.38767 -13.27145 -12.80917 -12.61889 -12.59143 -12.44119 -12.04654 -11.69703 -11.57169 -11.38240 -11.00002 -10.87313 -10.77383 -10.49525 -9.92841 -9.86036 -9.48068 -9.36509 -9.24376 -8.51502 -8.32571 -8.24517 -6.68522 -4.28280 0.53145 0.69370 1.57319 2.55277 2.96601 3.02640 3.36561 3.42187 3.57349 3.72647 3.93653 4.23100 4.38546 4.40894 4.60257 4.80268 4.95287 5.00345 5.01609 5.12416 5.15722 5.42302 5.63132 5.69393 6.00610 6.03464 6.10154 6.20793 6.60820 6.72838 6.86133 6.90165 6.96446 7.27010 7.29813 7.56011 8.17033 8.29941 8.59175 8.80623 9.36633 10.69644 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.025315 B = 0.002706 C = 0.002548 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1105.807581 B =10344.372005 C =10986.416018 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.132 4.132 3 C 0.253 3.747 4 H 0.042 0.958 5 C -0.632 4.632 6 H 0.063 0.937 7 C 0.050 3.950 8 N -0.884 5.884 9 Si 1.029 2.971 10 H -0.282 1.282 11 H -0.280 1.280 12 H -0.273 1.273 13 N -0.696 5.696 14 C 0.503 3.497 15 O -0.526 6.526 16 C 0.034 3.966 17 O -0.276 6.276 18 C 0.142 3.858 19 C -0.116 4.116 20 C -0.100 4.100 21 C 0.065 3.935 22 F -0.130 7.130 23 C -0.032 4.032 24 Cl -0.046 7.046 25 C -0.181 4.181 26 H 0.052 0.948 27 H 0.047 0.953 28 H 0.031 0.969 29 H 0.051 0.949 30 H 0.065 0.935 31 H 0.272 0.728 32 H 0.394 0.606 33 H 0.092 0.908 34 H 0.091 0.909 35 H 0.151 0.849 36 H 0.153 0.847 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.484 8.470 -14.778 22.359 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.171 4.171 3 C 0.150 3.850 4 H 0.060 0.940 5 C -0.669 4.669 6 H 0.081 0.919 7 C -0.159 4.159 8 N -0.515 5.515 9 Si 0.855 3.145 10 H -0.208 1.208 11 H -0.206 1.206 12 H -0.199 1.199 13 N -0.346 5.346 14 C 0.286 3.714 15 O -0.402 6.402 16 C -0.045 4.045 17 O -0.187 6.187 18 C 0.095 3.905 19 C -0.135 4.135 20 C -0.118 4.118 21 C 0.044 3.956 22 F -0.108 7.108 23 C -0.059 4.059 24 Cl -0.017 7.017 25 C -0.200 4.200 26 H 0.071 0.929 27 H 0.066 0.934 28 H 0.050 0.950 29 H 0.069 0.931 30 H 0.083 0.917 31 H 0.082 0.918 32 H 0.227 0.773 33 H 0.110 0.890 34 H 0.109 0.891 35 H 0.169 0.831 36 H 0.170 0.830 37 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -14.889 8.136 -12.437 21.037 hybrid contribution 0.524 0.420 -2.659 2.743 sum -14.366 8.556 -15.096 22.527 Atomic orbital electron populations 1.21903 0.97346 0.99020 1.01957 1.22247 0.93704 0.99603 1.01565 1.19067 0.95896 0.88482 0.81521 0.94002 1.21956 0.89531 1.50428 1.04986 0.91854 1.25611 0.96582 0.91585 1.02089 1.70873 1.13852 1.36144 1.30623 0.84235 0.76078 0.77719 0.76444 1.20778 1.20592 1.19855 1.46167 1.13777 1.56005 1.18613 1.19763 0.83419 0.80045 0.88135 1.90724 1.50324 1.58608 1.40593 1.22763 0.83014 0.99470 0.99259 1.86253 1.30430 1.68470 1.33567 1.18969 0.92988 0.92613 0.85940 1.20448 0.93651 0.99586 0.99828 1.20940 1.00610 0.99605 0.90687 1.17256 0.92010 1.00646 0.85656 1.91527 1.87180 1.79642 1.52486 1.20696 0.91892 1.02835 0.90521 1.98401 1.70535 1.96535 1.36262 1.21085 1.02152 1.04883 0.91907 0.92931 0.93384 0.94961 0.93068 0.91686 0.91799 0.77294 0.88962 0.89088 0.83102 0.82969 0.83251 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.83 8.53 37.16 0.32 -2.52 16 2 C -0.13 -2.83 5.37 -26.73 -0.14 -2.98 16 3 C 0.25 5.73 1.84 -69.09 -0.13 5.60 16 4 H 0.04 1.04 6.12 -51.93 -0.32 0.73 16 5 C -0.63 -16.27 8.92 -34.44 -0.31 -16.58 16 6 H 0.06 1.70 7.96 -52.49 -0.42 1.28 16 7 C 0.05 1.36 5.15 -17.82 -0.09 1.26 16 8 N -0.88 -25.35 13.70 55.43 0.76 -24.59 16 9 Si 1.03 24.25 26.56 -169.99 -4.51 19.74 16 10 H -0.28 -6.65 7.11 56.52 0.40 -6.25 16 11 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 12 H -0.27 -6.10 6.34 56.52 0.36 -5.74 16 13 N -0.70 -12.78 5.03 -54.93 -0.28 -13.05 16 14 C 0.50 8.76 6.51 -10.98 -0.07 8.69 16 15 O -0.53 -11.15 13.64 -14.35 -0.20 -11.34 16 16 C 0.03 0.41 5.22 36.01 0.19 0.60 16 17 O -0.28 -3.72 9.67 -39.46 -0.38 -4.10 16 18 C 0.14 1.55 6.69 -39.24 -0.26 1.29 16 19 C -0.12 -1.07 9.98 -39.43 -0.39 -1.47 16 20 C -0.10 -0.81 10.02 -39.54 -0.40 -1.21 16 21 C 0.06 0.64 7.27 -39.39 -0.29 0.35 16 22 F -0.13 -1.36 16.83 2.25 0.04 -1.32 16 23 C -0.03 -0.32 6.32 -39.46 -0.25 -0.57 16 24 Cl -0.05 -0.46 28.61 -51.86 -1.48 -1.94 16 25 C -0.18 -1.78 8.82 -39.41 -0.35 -2.13 16 26 H 0.05 1.08 7.89 -51.93 -0.41 0.67 16 27 H 0.05 0.92 5.63 -51.93 -0.29 0.63 16 28 H 0.03 0.55 8.14 -51.93 -0.42 0.13 16 29 H 0.05 1.06 8.14 -51.93 -0.42 0.63 16 30 H 0.06 1.47 5.77 -51.93 -0.30 1.17 16 31 H 0.27 7.68 8.73 -40.82 -0.36 7.33 16 32 H 0.39 6.19 8.53 -40.82 -0.35 5.84 16 33 H 0.09 0.92 7.65 -51.93 -0.40 0.52 16 34 H 0.09 0.87 7.67 -51.93 -0.40 0.47 16 35 H 0.15 1.20 8.06 -52.48 -0.42 0.77 16 36 H 0.15 0.83 8.06 -52.48 -0.42 0.41 16 37 H 0.15 1.24 6.30 -52.49 -0.33 0.91 16 LS Contribution 329.87 15.07 4.97 4.97 Total: -1.00 -30.48 329.87 -7.35 -37.83 By element: Atomic # 1 Polarization: 7.54 SS G_CDS: -4.10 Total: 3.45 kcal Atomic # 6 Polarization: -7.48 SS G_CDS: -2.17 Total: -9.65 kcal Atomic # 7 Polarization: -38.12 SS G_CDS: 0.48 Total: -37.64 kcal Atomic # 8 Polarization: -14.86 SS G_CDS: -0.58 Total: -15.44 kcal Atomic # 9 Polarization: -1.36 SS G_CDS: 0.04 Total: -1.32 kcal Atomic # 14 Polarization: 24.25 SS G_CDS: -4.51 Total: 19.74 kcal Atomic # 17 Polarization: -0.46 SS G_CDS: -1.48 Total: -1.94 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -30.48 -7.35 -37.83 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000183933467.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.971 kcal (2) G-P(sol) polarization free energy of solvation -30.481 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.353 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.834 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.806 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds