Wall clock time and date at job start Tue Mar 31 2020 10:49:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 H 1.08994 * 109.47385 * 2 1 4 4 C 1.50702 * 109.46686 * 120.00192 * 2 1 3 5 5 H 1.08007 * 119.99981 * 114.47702 * 4 2 1 6 6 C 1.37872 * 120.00181 * 294.48189 * 4 2 1 7 7 N 1.31507 * 120.00188 * 164.58940 * 6 4 2 8 8 Si 1.86797 * 119.99894 * 344.86064 * 6 4 2 9 9 H 1.48501 * 109.47054 * 269.72685 * 8 6 4 10 10 H 1.48506 * 109.47355 * 29.72399 * 8 6 4 11 11 H 1.48500 * 109.47516 * 149.72369 * 8 6 4 12 12 N 1.46503 * 109.46991 * 239.99842 * 2 1 3 13 13 C 1.34774 * 120.00000 * 85.00701 * 12 2 1 14 14 O 1.21281 * 119.99791 * 0.02562 * 13 12 2 15 15 C 1.50697 * 120.00282 * 179.97438 * 13 12 2 16 16 C 1.52992 * 109.47648 * 179.97438 * 15 13 12 17 17 O 1.42899 * 109.47579 * 179.97438 * 16 15 13 18 18 C 1.35974 * 117.00040 * 179.97438 * 17 16 15 19 19 C 1.38686 * 120.03456 * 359.72830 * 18 17 16 20 20 C 1.38156 * 119.98137 * 179.74278 * 19 18 17 21 21 C 1.38469 * 120.05123 * 0.55524 * 20 19 18 22 22 F 1.35094 * 119.96820 * 179.72381 * 21 20 19 23 23 C 1.38436 * 120.06514 * 359.69986 * 21 20 19 24 24 C 1.38263 * 120.02098 * 0.02562 * 23 21 20 25 25 Cl 1.73596 * 120.02466 * 179.97438 * 24 23 21 26 26 H 1.08992 * 109.47288 * 173.53991 * 1 2 3 27 27 H 1.08997 * 109.47143 * 293.55201 * 1 2 3 28 28 H 1.09005 * 109.46269 * 53.54439 * 1 2 3 29 29 H 0.97004 * 120.00365 * 355.18112 * 7 6 4 30 30 H 0.97002 * 119.99993 * 265.00302 * 12 2 1 31 31 H 1.09001 * 109.47433 * 300.00072 * 15 13 12 32 32 H 1.09001 * 109.47090 * 59.99525 * 15 13 12 33 33 H 1.09001 * 109.46954 * 300.00600 * 16 15 13 34 34 H 1.09001 * 109.47071 * 59.99748 * 16 15 13 35 35 H 1.08001 * 120.00631 * 0.02562 * 19 18 17 36 36 H 1.08000 * 119.97803 * 180.27769 * 20 19 18 37 37 H 1.07999 * 119.98822 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0323 -0.7105 1.2305 5 1 2.5776 -1.6377 1.1339 6 6 1.7955 -0.1769 2.4795 7 7 1.9543 -0.9200 3.5529 8 14 1.2419 1.5993 2.6468 9 1 2.4316 2.4785 2.7762 10 1 0.4655 1.9913 1.4430 11 1 0.3884 1.7403 3.8538 12 7 2.0183 -0.6907 -1.1962 13 6 2.1472 -0.0183 -2.3571 14 8 1.8593 1.1586 -2.4114 15 6 2.6500 -0.7285 -3.5874 16 6 2.7009 0.2543 -4.7588 17 8 3.1783 -0.4191 -5.9253 18 6 3.2837 0.3174 -7.0635 19 6 2.9293 1.6582 -7.0580 20 6 3.0419 2.4067 -8.2138 21 6 3.4973 1.8164 -9.3807 22 9 3.6013 2.5486 -10.5112 23 6 3.8465 0.4769 -9.3897 24 6 3.7404 -0.2735 -8.2333 25 17 4.1777 -1.9535 -8.2447 26 1 -0.3633 -1.0211 -0.1156 27 1 -0.3633 0.4106 0.9420 28 1 -0.3632 0.6107 -0.8266 29 1 2.1697 -1.8615 3.4635 30 1 2.2490 -1.6319 -1.1526 31 1 3.6493 -1.1205 -3.3979 32 1 1.9778 -1.5508 -3.8325 33 1 1.7015 0.6459 -4.9482 34 1 3.3729 1.0768 -4.5140 35 1 2.5699 2.1182 -6.1494 36 1 2.7702 3.4520 -8.2084 37 1 4.2019 0.0179 -10.3004 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000194640112.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:49:47 Heat of formation + Delta-G solvation = -110.426360 kcal Electronic energy + Delta-G solvation = -22720.713311 eV Core-core repulsion = 18824.590374 eV Total energy + Delta-G solvation = -3896.122937 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.23376 -40.57722 -39.23723 -37.74454 -36.69888 -35.13600 -32.63920 -32.14773 -31.44827 -29.93110 -29.17287 -25.22648 -24.74515 -23.26794 -22.45627 -20.75593 -19.68142 -18.91339 -17.95016 -17.65631 -17.22971 -16.63312 -16.19997 -15.92984 -15.45497 -15.21666 -14.83116 -14.74672 -14.35990 -13.87021 -13.74044 -13.44279 -13.13148 -13.00654 -12.69280 -12.50111 -12.17905 -12.01763 -11.71630 -11.59051 -11.41937 -11.37997 -11.21920 -10.90615 -10.60576 -10.19968 -9.73852 -9.47843 -9.39818 -9.09228 -8.49020 -8.47520 -8.27869 -6.62560 -4.28323 0.52849 0.68945 1.72315 2.61448 2.98413 3.06034 3.36658 3.40643 3.54675 3.85896 3.96614 4.22536 4.35901 4.38933 4.60176 4.70309 4.83016 4.84779 5.10894 5.12239 5.14837 5.42354 5.43687 5.59806 5.62945 5.63368 5.68386 6.16512 6.31373 6.45692 6.59556 6.87202 6.89075 7.18996 7.27835 7.57272 8.17892 8.34136 8.61308 8.83668 9.40827 10.76968 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.025736 B = 0.002407 C = 0.002244 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1087.726691 B =11629.139918 C =12474.265302 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.155 4.155 2 C 0.241 3.759 3 H 0.044 0.956 4 C -0.619 4.619 5 H 0.062 0.938 6 C 0.040 3.960 7 N -0.898 5.898 8 Si 1.039 2.961 9 H -0.284 1.284 10 H -0.267 1.267 11 H -0.283 1.283 12 N -0.698 5.698 13 C 0.508 3.492 14 O -0.560 6.560 15 C -0.141 4.141 16 C 0.073 3.927 17 O -0.302 6.302 18 C 0.140 3.860 19 C -0.169 4.169 20 C -0.105 4.105 21 C 0.068 3.932 22 F -0.136 7.136 23 C -0.109 4.109 24 C -0.048 4.048 25 Cl -0.043 7.043 26 H 0.043 0.957 27 H 0.058 0.942 28 H 0.029 0.971 29 H 0.270 0.730 30 H 0.395 0.605 31 H 0.102 0.898 32 H 0.101 0.899 33 H 0.076 0.924 34 H 0.076 0.924 35 H 0.153 0.847 36 H 0.145 0.855 37 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.724 1.635 -25.259 25.458 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.213 4.213 2 C 0.138 3.862 3 H 0.061 0.939 4 C -0.656 4.656 5 H 0.080 0.920 6 C -0.167 4.167 7 N -0.531 5.531 8 Si 0.866 3.134 9 H -0.210 1.210 10 H -0.192 1.192 11 H -0.209 1.209 12 N -0.346 5.346 13 C 0.292 3.708 14 O -0.440 6.440 15 C -0.182 4.182 16 C -0.002 4.002 17 O -0.215 6.215 18 C 0.093 3.907 19 C -0.188 4.188 20 C -0.124 4.124 21 C 0.048 3.952 22 F -0.114 7.114 23 C -0.128 4.128 24 C -0.075 4.075 25 Cl -0.014 7.014 26 H 0.062 0.938 27 H 0.076 0.924 28 H 0.049 0.951 29 H 0.080 0.920 30 H 0.228 0.772 31 H 0.121 0.879 32 H 0.120 0.880 33 H 0.094 0.906 34 H 0.094 0.906 35 H 0.171 0.829 36 H 0.163 0.837 37 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.233 3.295 -24.118 24.444 hybrid contribution 0.525 -1.631 -1.172 2.076 sum 2.758 1.664 -25.290 25.494 Atomic orbital electron populations 1.22448 0.98880 0.99919 1.00088 1.19095 0.90547 0.94286 0.82311 0.93869 1.22092 1.41293 1.11255 0.90996 0.91981 1.25694 0.93884 1.05476 0.91609 1.70823 1.43178 1.08345 1.30707 0.84176 0.77581 0.75278 0.76376 1.21006 1.19225 1.20923 1.46278 1.64568 1.13889 1.09822 1.20112 0.78652 0.87367 0.84645 1.90663 1.51957 1.16052 1.85367 1.21497 1.04752 0.99585 0.92327 1.22601 1.00377 0.95226 0.81964 1.86104 1.80591 1.38218 1.16561 1.18664 0.95575 0.90162 0.86305 1.21252 1.04763 0.92479 1.00259 1.21087 0.98973 1.01371 0.90926 1.17301 1.05245 0.89372 0.83237 1.91516 1.94238 1.76721 1.48946 1.20800 1.01520 0.92358 0.98166 1.19835 1.07403 0.87717 0.92575 1.98390 1.91282 1.13060 1.98695 0.93753 0.92356 0.95148 0.92001 0.77157 0.87934 0.88037 0.90615 0.90557 0.82925 0.83677 0.83126 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.37 8.76 37.16 0.33 -3.04 16 2 C 0.24 5.56 2.11 -69.08 -0.15 5.42 16 3 H 0.04 1.08 6.21 -51.93 -0.32 0.76 16 4 C -0.62 -16.27 9.02 -34.44 -0.31 -16.58 16 5 H 0.06 1.71 7.96 -52.48 -0.42 1.29 16 6 C 0.04 1.10 5.33 -17.82 -0.09 1.01 16 7 N -0.90 -26.33 13.69 55.43 0.76 -25.57 16 8 Si 1.04 24.40 26.17 -169.99 -4.45 19.95 16 9 H -0.28 -6.53 7.11 56.52 0.40 -6.13 16 10 H -0.27 -5.89 5.53 56.52 0.31 -5.58 16 11 H -0.28 -6.61 7.11 56.52 0.40 -6.21 16 12 N -0.70 -13.19 5.07 -54.93 -0.28 -13.47 16 13 C 0.51 8.72 7.79 -10.99 -0.09 8.63 16 14 O -0.56 -11.45 15.64 5.56 0.09 -11.36 16 15 C -0.14 -1.71 6.07 -27.89 -0.17 -1.88 16 16 C 0.07 0.84 4.03 37.15 0.15 0.99 16 17 O -0.30 -3.45 9.60 -19.66 -0.19 -3.64 16 18 C 0.14 1.49 6.68 -39.21 -0.26 1.22 16 19 C -0.17 -1.55 9.04 -39.45 -0.36 -1.91 16 20 C -0.10 -0.87 10.02 -39.53 -0.40 -1.27 16 21 C 0.07 0.61 7.30 -39.42 -0.29 0.32 16 22 F -0.14 -1.28 17.26 2.25 0.04 -1.24 16 23 C -0.11 -0.95 9.80 -39.50 -0.39 -1.33 16 24 C -0.05 -0.48 6.33 -39.37 -0.25 -0.73 16 25 Cl -0.04 -0.43 28.50 -51.86 -1.48 -1.91 16 26 H 0.04 0.91 8.14 -51.93 -0.42 0.48 16 27 H 0.06 1.29 5.06 -51.93 -0.26 1.03 16 28 H 0.03 0.62 8.14 -51.93 -0.42 0.20 16 29 H 0.27 7.82 8.73 -40.82 -0.36 7.47 16 30 H 0.40 6.57 8.53 -40.82 -0.35 6.22 16 31 H 0.10 1.11 8.14 -51.93 -0.42 0.69 16 32 H 0.10 1.06 8.14 -51.93 -0.42 0.64 16 33 H 0.08 0.86 7.61 -51.93 -0.39 0.46 16 34 H 0.08 0.88 7.63 -51.93 -0.40 0.48 16 35 H 0.15 1.28 6.30 -52.49 -0.33 0.95 16 36 H 0.15 0.91 8.06 -52.49 -0.42 0.48 16 37 H 0.15 1.02 8.06 -52.49 -0.42 0.60 16 LS Contribution 334.67 15.07 5.04 5.04 Total: -1.00 -30.51 334.67 -6.98 -37.49 By element: Atomic # 1 Polarization: 8.08 SS G_CDS: -4.25 Total: 3.83 kcal Atomic # 6 Polarization: -6.87 SS G_CDS: -2.27 Total: -9.14 kcal Atomic # 7 Polarization: -39.52 SS G_CDS: 0.48 Total: -39.04 kcal Atomic # 8 Polarization: -14.90 SS G_CDS: -0.10 Total: -15.00 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 0.04 Total: -1.24 kcal Atomic # 14 Polarization: 24.40 SS G_CDS: -4.45 Total: 19.95 kcal Atomic # 17 Polarization: -0.43 SS G_CDS: -1.48 Total: -1.91 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -30.51 -6.98 -37.49 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000194640112.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.932 kcal (2) G-P(sol) polarization free energy of solvation -30.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -103.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.985 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.494 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.426 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds