Wall clock time and date at job start Tue Mar 31 2020 10:40:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53004 * 1 3 3 C 1.53003 * 109.46854 * 2 1 4 4 N 1.46501 * 109.46637 * 185.58405 * 3 2 1 5 5 C 1.37098 * 120.00365 * 82.95581 * 4 3 2 6 6 H 1.07999 * 120.00033 * 170.70888 * 5 4 3 7 7 C 1.38953 * 119.99667 * 350.70878 * 5 4 3 8 8 N 1.31407 * 119.99890 * 1.41564 * 7 5 4 9 9 Si 1.86802 * 119.99809 * 181.41736 * 7 5 4 10 10 H 1.48493 * 109.47103 * 59.99821 * 9 7 5 11 11 H 1.48497 * 109.46846 * 179.97438 * 9 7 5 12 12 H 1.48501 * 109.46898 * 300.00152 * 9 7 5 13 13 C 1.34774 * 119.99816 * 262.95774 * 4 3 2 14 14 O 1.21296 * 120.00246 * 184.18136 * 13 4 3 15 15 C 1.50704 * 120.00062 * 4.17291 * 13 4 3 16 16 H 1.08992 * 109.46923 * 11.68053 * 15 13 4 17 17 O 1.42901 * 109.46674 * 131.67686 * 15 13 4 18 18 C 1.50697 * 109.47108 * 251.67382 * 15 13 4 19 19 C 1.38222 * 120.00531 * 267.05995 * 18 15 13 20 20 C 1.38195 * 120.04198 * 180.02562 * 19 18 15 21 21 C 1.38382 * 120.03888 * 0.02562 * 20 19 18 22 22 Cl 1.73606 * 120.00265 * 179.97438 * 21 20 19 23 23 C 1.38289 * 119.99863 * 359.97438 * 21 20 19 24 24 C 1.38452 * 119.99657 * 87.09219 * 18 15 13 25 25 F 1.35095 * 120.01817 * 359.97438 * 24 18 15 26 26 H 1.09006 * 109.47177 * 304.96407 * 1 2 3 27 27 H 1.09005 * 109.46919 * 64.95781 * 1 2 3 28 28 H 1.08996 * 109.47285 * 184.96475 * 1 2 3 29 29 H 1.08998 * 109.46792 * 239.99659 * 2 1 3 30 30 H 1.09000 * 109.46483 * 119.99887 * 2 1 3 31 31 H 1.08999 * 109.47261 * 65.58272 * 3 2 1 32 32 H 1.09004 * 109.47126 * 305.57773 * 3 2 1 33 33 H 0.97005 * 119.99542 * 179.97438 * 8 7 5 34 34 H 0.96700 * 114.00439 * 60.00643 * 17 15 13 35 35 H 1.08000 * 119.97778 * 0.04939 * 19 18 15 36 36 H 1.08001 * 119.98311 * 180.28460 * 20 19 18 37 37 H 1.08006 * 120.02187 * 179.97438 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.4988 1.4447 -0.1344 5 6 4.0732 1.3384 -1.3747 6 1 5.1360 1.4898 -1.4924 7 6 3.2878 1.0358 -2.4804 8 7 1.9905 0.8791 -2.3416 9 14 4.0762 0.8519 -4.1638 10 1 5.0775 -0.2439 -4.1244 11 1 3.0302 0.5302 -5.1677 12 1 4.7475 2.1227 -4.5375 13 6 4.2763 1.5511 0.9613 14 8 5.4811 1.6293 0.8449 15 6 3.6488 1.5732 2.3313 16 1 2.5996 1.2880 2.2549 17 8 4.3322 0.6515 3.1831 18 6 3.7513 2.9615 2.9085 19 6 4.8245 3.2986 3.7117 20 6 4.9190 4.5713 4.2419 21 6 3.9391 5.5097 3.9696 22 17 4.0585 7.1080 4.6365 23 6 2.8647 5.1742 3.1661 24 6 2.7702 3.8992 2.6346 25 9 1.7210 3.5701 1.8497 26 1 -0.3634 0.5889 0.8422 27 1 -0.3633 0.4350 -0.9311 28 1 -0.3633 -1.0238 0.0889 29 1 1.8933 -0.5139 -0.8900 30 1 1.8933 -0.5138 0.8900 31 1 1.7606 1.9267 0.9357 32 1 1.5973 1.9844 -0.8359 33 1 1.4422 0.6682 -3.1136 34 1 5.2728 0.8445 3.2971 35 1 5.5898 2.5669 3.9249 36 1 5.7603 4.8350 4.8656 37 1 2.0995 5.9062 2.9537 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291518252.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:40:28 Heat of formation + Delta-G solvation = -89.054007 kcal Electronic energy + Delta-G solvation = -25044.179395 eV Core-core repulsion = 21148.983233 eV Total energy + Delta-G solvation = -3895.196162 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -48.94024 -39.82021 -38.51323 -36.78940 -36.09338 -35.15342 -32.15833 -31.61046 -31.17866 -30.73846 -27.19420 -25.52752 -24.26714 -22.94875 -22.01624 -20.59435 -19.48326 -18.20509 -17.32042 -17.02541 -16.63138 -16.25455 -15.54969 -15.33117 -14.91832 -14.44453 -14.18111 -13.89909 -13.63483 -13.57283 -13.31182 -13.29127 -13.01835 -12.60217 -12.24208 -11.73130 -11.66247 -11.51217 -11.33651 -11.16979 -11.13660 -10.98171 -10.65522 -10.51639 -10.34647 -10.26667 -10.11184 -9.75705 -9.07082 -8.86855 -8.78930 -8.17639 -7.76483 -6.24205 -3.89787 0.90168 1.05986 1.89668 3.11340 3.20599 3.24143 3.33686 3.66248 4.03728 4.22447 4.46702 4.61648 4.78027 4.87047 4.88932 5.11283 5.20176 5.43550 5.59940 5.60567 5.82470 5.87974 6.04333 6.09399 6.11970 6.25277 6.40219 6.46717 6.65124 6.76724 6.94717 7.05648 7.37669 7.57980 7.75310 7.78560 7.99837 8.43860 9.07930 9.34591 9.83619 10.59757 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.016870 B = 0.004321 C = 0.004207 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1659.388199 B = 6478.187374 C = 6653.323258 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C -0.116 4.116 3 C 0.107 3.893 4 N -0.424 5.424 5 C -0.297 4.297 6 H 0.103 0.897 7 C 0.026 3.974 8 N -0.869 5.869 9 Si 0.933 3.067 10 H -0.274 1.274 11 H -0.283 1.283 12 H -0.274 1.274 13 C 0.412 3.588 14 O -0.593 6.593 15 C 0.134 3.866 16 H 0.125 0.875 17 O -0.537 6.537 18 C -0.124 4.124 19 C -0.061 4.061 20 C -0.118 4.118 21 C -0.013 4.013 22 Cl -0.065 7.065 23 C -0.146 4.146 24 C 0.122 3.878 25 F -0.117 7.117 26 H 0.034 0.966 27 H 0.058 0.942 28 H 0.035 0.965 29 H 0.097 0.903 30 H 0.021 0.979 31 H 0.046 0.954 32 H 0.119 0.881 33 H 0.266 0.734 34 H 0.378 0.622 35 H 0.143 0.857 36 H 0.140 0.860 37 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.518 6.361 10.898 12.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.154 4.154 3 C -0.016 4.016 4 N -0.141 5.141 5 C -0.425 4.425 6 H 0.121 0.879 7 C -0.176 4.176 8 N -0.510 5.510 9 Si 0.760 3.240 10 H -0.199 1.199 11 H -0.208 1.208 12 H -0.200 1.200 13 C 0.199 3.801 14 O -0.480 6.480 15 C 0.071 3.929 16 H 0.143 0.857 17 O -0.343 6.343 18 C -0.126 4.126 19 C -0.079 4.079 20 C -0.137 4.137 21 C -0.040 4.040 22 Cl -0.036 7.036 23 C -0.165 4.165 24 C 0.103 3.897 25 F -0.096 7.096 26 H 0.053 0.947 27 H 0.078 0.922 28 H 0.055 0.945 29 H 0.115 0.885 30 H 0.039 0.961 31 H 0.064 0.936 32 H 0.136 0.864 33 H 0.078 0.922 34 H 0.227 0.773 35 H 0.161 0.839 36 H 0.158 0.842 37 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -1.734 6.210 10.732 12.521 hybrid contribution 0.467 0.270 -1.014 1.149 sum -1.268 6.480 9.718 11.749 Atomic orbital electron populations 1.21554 0.97227 0.99429 1.00902 1.21911 0.94292 0.98016 1.01152 1.22213 0.80241 0.97874 1.01259 1.43882 1.05783 1.59229 1.05178 1.19793 0.95281 1.44702 0.82680 0.87922 1.25310 0.95574 0.96629 1.00116 1.70194 1.03905 1.46667 1.30273 0.85881 0.78459 0.79020 0.80659 1.19920 1.20823 1.19961 1.20209 0.87671 0.86759 0.85504 1.90507 1.14253 1.57266 1.85940 1.20774 0.98575 0.84543 0.89021 0.85734 1.86586 1.26884 1.53135 1.67692 1.20635 0.95140 0.97374 0.99495 1.20704 0.96380 0.95997 0.94826 1.21022 0.98738 0.92386 1.01553 1.20534 0.96902 0.87174 0.99393 1.98369 1.97958 1.23041 1.84274 1.20890 0.99793 0.95895 0.99967 1.17231 0.86050 0.93101 0.93363 1.91488 1.54617 1.92166 1.71297 0.94675 0.92249 0.94546 0.88488 0.96057 0.93645 0.86386 0.92244 0.77302 0.83929 0.84186 0.83578 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -2.38 9.91 37.16 0.37 -2.02 16 2 C -0.12 -2.46 5.28 -26.73 -0.14 -2.60 16 3 C 0.11 2.39 4.26 -4.04 -0.02 2.38 16 4 N -0.42 -10.68 2.64 -114.81 -0.30 -10.98 16 5 C -0.30 -8.02 9.51 -14.93 -0.14 -8.16 16 6 H 0.10 2.93 7.19 -52.49 -0.38 2.55 16 7 C 0.03 0.64 5.20 -17.47 -0.09 0.55 16 8 N -0.87 -21.15 7.25 55.50 0.40 -20.75 16 9 Si 0.93 20.19 29.55 -169.99 -5.02 15.16 16 10 H -0.27 -6.00 7.11 56.52 0.40 -5.60 16 11 H -0.28 -5.97 7.11 56.52 0.40 -5.57 16 12 H -0.27 -5.97 7.11 56.52 0.40 -5.56 16 13 C 0.41 9.92 6.65 -10.98 -0.07 9.85 16 14 O -0.59 -15.84 16.36 -7.26 -0.12 -15.96 16 15 C 0.13 2.59 3.03 -29.03 -0.09 2.50 16 16 H 0.13 2.41 5.38 -51.93 -0.28 2.14 16 17 O -0.54 -9.64 13.00 -48.03 -0.62 -10.26 16 18 C -0.12 -2.10 5.04 -104.55 -0.53 -2.62 16 19 C -0.06 -0.86 9.31 -39.60 -0.37 -1.22 16 20 C -0.12 -1.45 9.83 -39.54 -0.39 -1.84 16 21 C -0.01 -0.17 6.32 -39.51 -0.25 -0.42 16 22 Cl -0.07 -0.72 28.96 -51.86 -1.50 -2.22 16 23 C -0.15 -2.00 9.81 -39.48 -0.39 -2.38 16 24 C 0.12 1.99 7.24 -39.42 -0.29 1.70 16 25 F -0.12 -2.03 13.75 2.25 0.03 -2.00 16 26 H 0.03 0.57 8.14 -51.93 -0.42 0.14 16 27 H 0.06 1.09 8.14 -51.93 -0.42 0.67 16 28 H 0.04 0.59 8.14 -51.93 -0.42 0.16 16 29 H 0.10 2.34 5.99 -51.93 -0.31 2.03 16 30 H 0.02 0.44 8.03 -51.93 -0.42 0.03 16 31 H 0.05 0.93 2.82 -51.93 -0.15 0.78 16 32 H 0.12 2.87 5.95 -51.93 -0.31 2.57 16 33 H 0.27 6.21 8.31 -40.82 -0.34 5.87 16 34 H 0.38 5.77 7.04 45.56 0.32 6.09 16 35 H 0.14 1.73 6.43 -52.49 -0.34 1.39 16 36 H 0.14 1.33 8.06 -52.49 -0.42 0.91 16 37 H 0.15 1.70 8.06 -52.48 -0.42 1.28 16 LS Contribution 321.93 15.07 4.85 4.85 Total: -1.00 -28.78 321.93 -7.78 -36.56 By element: Atomic # 1 Polarization: 12.99 SS G_CDS: -3.11 Total: 9.88 kcal Atomic # 6 Polarization: -1.90 SS G_CDS: -2.39 Total: -4.29 kcal Atomic # 7 Polarization: -31.83 SS G_CDS: 0.10 Total: -31.73 kcal Atomic # 8 Polarization: -25.48 SS G_CDS: -0.74 Total: -26.22 kcal Atomic # 9 Polarization: -2.03 SS G_CDS: 0.03 Total: -2.00 kcal Atomic # 14 Polarization: 20.19 SS G_CDS: -5.02 Total: 15.16 kcal Atomic # 17 Polarization: -0.72 SS G_CDS: -1.50 Total: -2.22 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -28.78 -7.78 -36.56 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291518252.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.490 kcal (2) G-P(sol) polarization free energy of solvation -28.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.270 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.784 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.564 kcal (6) G-S(sol) free energy of system = (1) + (5) -89.054 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds