Wall clock time and date at job start Tue Mar 31 2020 10:38:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52989 * 1 3 3 C 1.53000 * 109.47749 * 2 1 4 4 H 1.09007 * 109.46996 * 54.99396 * 3 2 1 5 5 C 1.50692 * 109.47677 * 175.00089 * 3 2 1 6 6 H 1.08003 * 120.00278 * 119.99776 * 5 3 2 7 7 C 1.37878 * 119.99833 * 299.99856 * 5 3 2 8 8 N 1.31518 * 119.99942 * 359.97438 * 7 5 3 9 9 Si 1.86801 * 120.00055 * 180.02562 * 7 5 3 10 10 H 1.48500 * 109.47405 * 89.99846 * 9 7 5 11 11 H 1.48505 * 109.47285 * 210.00254 * 9 7 5 12 12 H 1.48498 * 109.47035 * 329.99694 * 9 7 5 13 13 N 1.46498 * 109.46792 * 295.00407 * 3 2 1 14 14 C 1.34780 * 120.00522 * 84.99669 * 13 3 2 15 15 O 1.21281 * 119.99596 * 359.97438 * 14 13 3 16 16 C 1.50700 * 119.99874 * 180.02562 * 14 13 3 17 17 H 1.08996 * 109.47709 * 55.00110 * 16 14 13 18 18 O 1.42901 * 109.46654 * 174.99874 * 16 14 13 19 19 C 1.50700 * 109.47350 * 294.99540 * 16 14 13 20 20 C 1.38222 * 120.00187 * 265.00880 * 19 16 14 21 21 C 1.38206 * 120.04037 * 179.97438 * 20 19 16 22 22 C 1.38377 * 120.03608 * 0.02562 * 21 20 19 23 23 Cl 1.73607 * 120.00035 * 180.02562 * 22 21 20 24 24 C 1.38295 * 120.00193 * 359.97438 * 22 21 20 25 25 C 1.38450 * 119.99629 * 84.99951 * 19 16 14 26 26 F 1.35092 * 120.01788 * 0.03055 * 25 19 16 27 27 H 1.08997 * 109.47812 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47255 * 300.00170 * 1 2 3 29 29 H 1.09006 * 109.47212 * 59.99610 * 1 2 3 30 30 H 1.09000 * 109.47255 * 239.99830 * 2 1 3 31 31 H 1.09003 * 109.47102 * 119.99869 * 2 1 3 32 32 H 0.97002 * 119.99661 * 179.97438 * 8 7 5 33 33 H 0.97008 * 120.00064 * 264.99221 * 13 3 2 34 34 H 0.96695 * 114.00581 * 59.99922 * 18 16 14 35 35 H 1.08005 * 119.98233 * 0.02562 * 20 19 16 36 36 H 1.08001 * 119.97690 * 179.97438 * 21 20 19 37 37 H 1.07997 * 120.02489 * 179.73130 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 1 1.6054 1.9816 0.8418 5 6 3.5419 1.4442 0.1238 6 1 4.1472 1.8888 -0.6524 7 6 4.1432 0.8783 1.2280 8 7 3.4061 0.3374 2.1733 9 14 6.0049 0.8811 1.3818 10 1 6.4417 2.1141 2.0849 11 1 6.4395 -0.3100 2.1550 12 1 6.6135 0.8414 0.0279 13 7 1.6524 2.0974 -1.2518 14 6 0.4351 2.6644 -1.3670 15 8 -0.3396 2.6320 -0.4344 16 6 0.0363 3.3376 -2.6549 17 1 0.1524 2.6374 -3.4821 18 8 -1.3279 3.7546 -2.5718 19 6 0.9156 4.5394 -2.8868 20 6 0.4931 5.7927 -2.4854 21 6 1.2990 6.8953 -2.6972 22 6 2.5297 6.7458 -3.3120 23 17 3.5416 8.1313 -3.5770 24 6 2.9540 5.4926 -3.7143 25 6 2.1467 4.3879 -3.5019 26 9 2.5598 3.1632 -3.8948 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 1.8932 -0.5139 -0.8900 31 1 1.8932 -0.5138 0.8900 32 1 3.8292 -0.0610 2.9500 33 1 2.2719 2.1231 -1.9978 34 1 -1.5052 4.3801 -1.8560 35 1 -0.4671 5.9104 -2.0051 36 1 0.9677 7.8742 -2.3835 37 1 3.9126 5.3761 -4.1980 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291774268.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:38:28 Heat of formation + Delta-G solvation = -120.666756 kcal Electronic energy + Delta-G solvation = -24594.723453 eV Core-core repulsion = 20698.156459 eV Total energy + Delta-G solvation = -3896.566994 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -49.19640 -40.17340 -38.84394 -36.99412 -36.30735 -34.92594 -32.64329 -31.70208 -31.06792 -30.66513 -27.63879 -26.28448 -23.23667 -23.13640 -22.34946 -20.53211 -19.44549 -18.42317 -17.95420 -17.07360 -16.94441 -16.04518 -15.82176 -15.60591 -15.31158 -14.97697 -14.44705 -14.34289 -13.86979 -13.67240 -13.50127 -13.27540 -12.85433 -12.68351 -12.38749 -11.90773 -11.72362 -11.55561 -11.49556 -11.29253 -11.26780 -11.00147 -10.87153 -10.84657 -10.34165 -10.21472 -9.66411 -9.39731 -9.17355 -9.09620 -8.64982 -8.52151 -7.91946 -6.15294 -4.24778 0.63333 0.81941 1.73506 3.01186 3.19806 3.22661 3.29550 3.31539 3.84334 3.94103 4.26358 4.31190 4.37496 4.41831 4.65493 4.84483 5.16037 5.20470 5.27946 5.38061 5.54786 5.62781 5.80835 5.92397 6.37098 6.38327 6.43288 6.62895 7.01116 7.14112 7.30316 7.36722 7.39068 7.57896 7.68044 7.85211 8.13814 8.54824 8.70762 8.97808 9.42141 10.89999 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.011802 B = 0.005021 C = 0.003868 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2371.861651 B = 5574.719621 C = 7237.800899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.138 4.138 2 C -0.128 4.128 3 C 0.270 3.730 4 H 0.050 0.950 5 C -0.534 4.534 6 H 0.060 0.940 7 C 0.068 3.932 8 N -0.881 5.881 9 Si 0.900 3.100 10 H -0.280 1.280 11 H -0.284 1.284 12 H -0.273 1.273 13 N -0.699 5.699 14 C 0.478 3.522 15 O -0.535 6.535 16 C 0.130 3.870 17 H 0.132 0.868 18 O -0.529 6.529 19 C -0.140 4.140 20 C -0.065 4.065 21 C -0.115 4.115 22 C -0.008 4.008 23 Cl -0.058 7.058 24 C -0.140 4.140 25 C 0.127 3.873 26 F -0.123 7.123 27 H 0.024 0.976 28 H 0.049 0.951 29 H 0.038 0.962 30 H 0.032 0.968 31 H 0.100 0.900 32 H 0.265 0.735 33 H 0.389 0.611 34 H 0.381 0.619 35 H 0.145 0.855 36 H 0.143 0.857 37 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.994 12.056 -12.164 17.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.195 4.195 2 C -0.167 4.167 3 C 0.168 3.832 4 H 0.068 0.932 5 C -0.572 4.572 6 H 0.078 0.922 7 C -0.135 4.135 8 N -0.519 5.519 9 Si 0.727 3.273 10 H -0.206 1.206 11 H -0.210 1.210 12 H -0.198 1.198 13 N -0.349 5.349 14 C 0.261 3.739 15 O -0.414 6.414 16 C 0.067 3.933 17 H 0.149 0.851 18 O -0.334 6.334 19 C -0.142 4.142 20 C -0.084 4.084 21 C -0.133 4.133 22 C -0.034 4.034 23 Cl -0.029 7.029 24 C -0.160 4.160 25 C 0.107 3.893 26 F -0.102 7.102 27 H 0.043 0.957 28 H 0.068 0.932 29 H 0.057 0.943 30 H 0.051 0.949 31 H 0.119 0.881 32 H 0.075 0.925 33 H 0.223 0.777 34 H 0.231 0.769 35 H 0.162 0.838 36 H 0.161 0.839 37 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges -3.479 11.596 -11.831 16.927 hybrid contribution 1.692 0.200 0.124 1.708 sum -1.787 11.796 -11.707 16.715 Atomic orbital electron populations 1.21840 0.98270 0.98200 1.01185 1.21943 0.92660 0.99683 1.02439 1.18842 0.94367 0.89279 0.80690 0.93239 1.21198 0.90581 1.39154 1.06316 0.92162 1.24866 0.98590 0.94719 0.95344 1.69892 1.35140 1.37538 1.09312 0.86475 0.84877 0.77690 0.78264 1.20552 1.20991 1.19790 1.46655 1.14212 1.55141 1.18909 1.20830 0.83479 0.80422 0.89193 1.90698 1.51130 1.60069 1.39462 1.20708 0.81894 0.92520 0.98192 0.85078 1.86600 1.23313 1.66934 1.56546 1.20523 0.95179 0.97204 1.01269 1.20725 1.00034 0.90262 0.97342 1.21059 0.92606 1.00193 0.99487 1.20606 0.93110 0.88315 1.01407 1.98389 1.68177 1.41253 1.95107 1.20949 1.01414 0.90124 1.03488 1.17143 0.93058 0.80435 0.98647 1.91520 1.90107 1.40215 1.88327 0.95696 0.93154 0.94334 0.94926 0.88141 0.92523 0.77689 0.76878 0.83778 0.83912 0.83226 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.07 8.51 37.15 0.32 -2.76 16 2 C -0.13 -3.12 5.45 -26.74 -0.15 -3.26 16 3 C 0.27 6.72 2.24 -69.09 -0.15 6.57 16 4 H 0.05 1.42 7.58 -51.92 -0.39 1.03 16 5 C -0.53 -14.03 8.73 -34.44 -0.30 -14.33 16 6 H 0.06 1.54 7.74 -52.48 -0.41 1.13 16 7 C 0.07 1.81 5.29 -17.82 -0.09 1.72 16 8 N -0.88 -24.44 11.29 55.43 0.63 -23.82 16 9 Si 0.90 20.54 29.54 -169.99 -5.02 15.52 16 10 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 11 H -0.28 -6.46 7.11 56.52 0.40 -6.05 16 12 H -0.27 -6.12 7.11 56.52 0.40 -5.72 16 13 N -0.70 -14.45 4.97 -54.93 -0.27 -14.72 16 14 C 0.48 9.15 5.72 -10.98 -0.06 9.08 16 15 O -0.54 -11.86 13.46 -14.30 -0.19 -12.06 16 16 C 0.13 1.90 3.39 -29.04 -0.10 1.80 16 17 H 0.13 1.78 7.79 -51.93 -0.40 1.37 16 18 O -0.53 -7.32 12.64 -55.09 -0.70 -8.01 16 19 C -0.14 -1.81 5.02 -104.55 -0.52 -2.33 16 20 C -0.07 -0.71 9.30 -39.60 -0.37 -1.07 16 21 C -0.11 -1.13 9.83 -39.54 -0.39 -1.52 16 22 C -0.01 -0.08 6.32 -39.51 -0.25 -0.33 16 23 Cl -0.06 -0.57 28.96 -51.86 -1.50 -2.07 16 24 C -0.14 -1.61 9.81 -39.48 -0.39 -2.00 16 25 C 0.13 1.64 6.94 -39.42 -0.27 1.37 16 26 F -0.12 -1.68 14.72 2.25 0.03 -1.64 16 27 H 0.02 0.49 8.14 -51.93 -0.42 0.07 16 28 H 0.05 1.19 7.85 -51.93 -0.41 0.78 16 29 H 0.04 0.84 5.64 -51.93 -0.29 0.54 16 30 H 0.03 0.76 8.14 -51.93 -0.42 0.34 16 31 H 0.10 2.68 5.95 -51.93 -0.31 2.37 16 32 H 0.26 6.98 8.31 -40.82 -0.34 6.64 16 33 H 0.39 7.39 6.24 -40.82 -0.25 7.13 16 34 H 0.38 4.33 7.07 45.56 0.32 4.65 16 35 H 0.14 1.22 6.41 -52.48 -0.34 0.88 16 36 H 0.14 1.07 8.06 -52.49 -0.42 0.65 16 37 H 0.15 1.48 8.06 -52.49 -0.42 1.05 16 LS Contribution 326.44 15.07 4.92 4.92 Total: -1.00 -29.91 326.44 -8.15 -38.06 By element: Atomic # 1 Polarization: 14.19 SS G_CDS: -3.31 Total: 10.88 kcal Atomic # 6 Polarization: -4.33 SS G_CDS: -2.73 Total: -7.06 kcal Atomic # 7 Polarization: -38.89 SS G_CDS: 0.35 Total: -38.54 kcal Atomic # 8 Polarization: -19.18 SS G_CDS: -0.89 Total: -20.07 kcal Atomic # 9 Polarization: -1.68 SS G_CDS: 0.03 Total: -1.64 kcal Atomic # 14 Polarization: 20.54 SS G_CDS: -5.02 Total: 15.52 kcal Atomic # 17 Polarization: -0.57 SS G_CDS: -1.50 Total: -2.07 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -29.91 -8.15 -38.06 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291774268.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.610 kcal (2) G-P(sol) polarization free energy of solvation -29.909 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -112.519 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.147 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.667 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds