Wall clock time and date at job start Tue Mar 31 2020 10:40:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.52999 * 109.47513 * 2 1 4 4 N 1.46498 * 109.47074 * 180.02562 * 3 2 1 5 5 C 1.37098 * 119.99884 * 269.99571 * 4 3 2 6 6 H 1.07997 * 120.00153 * 143.15289 * 5 4 3 7 7 C 1.38952 * 119.99823 * 323.15563 * 5 4 3 8 8 N 1.31414 * 120.00503 * 338.18293 * 7 5 4 9 9 Si 1.86805 * 119.99996 * 158.18343 * 7 5 4 10 10 H 1.48505 * 109.47099 * 89.99915 * 9 7 5 11 11 H 1.48498 * 109.47049 * 209.99937 * 9 7 5 12 12 H 1.48506 * 109.46967 * 330.00048 * 9 7 5 13 13 C 1.34779 * 120.00514 * 90.00228 * 4 3 2 14 14 O 1.21292 * 119.99308 * 354.75590 * 13 4 3 15 15 C 1.50698 * 120.00140 * 174.76431 * 13 4 3 16 16 O 1.42900 * 109.46631 * 182.10445 * 15 13 4 17 17 C 1.35926 * 116.99961 * 181.91422 * 16 15 13 18 18 C 1.38755 * 120.02759 * 5.50708 * 17 16 15 19 19 C 1.38144 * 120.00336 * 179.97438 * 18 17 16 20 20 C 1.38332 * 120.06696 * 359.97438 * 19 18 17 21 21 Cl 1.73599 * 119.96771 * 180.27816 * 20 19 18 22 22 C 1.38567 * 120.06105 * 0.02562 * 20 19 18 23 23 F 1.35100 * 120.00115 * 180.02562 * 22 20 19 24 24 C 1.38364 * 119.99852 * 359.97438 * 22 20 19 25 25 H 1.08999 * 109.46987 * 180.02562 * 1 2 3 26 26 H 1.09005 * 109.46720 * 300.00172 * 1 2 3 27 27 H 1.08995 * 109.46854 * 59.99760 * 1 2 3 28 28 H 1.09000 * 109.47002 * 239.99447 * 2 1 3 29 29 H 1.09005 * 109.47386 * 120.00187 * 2 1 3 30 30 H 1.08993 * 109.47048 * 59.99774 * 3 2 1 31 31 H 1.09003 * 109.46681 * 299.99730 * 3 2 1 32 32 H 0.96998 * 120.00371 * 185.05721 * 8 7 5 33 33 H 1.08999 * 109.46749 * 62.11314 * 15 13 4 34 34 H 1.08992 * 109.47155 * 302.10341 * 15 13 4 35 35 H 1.07998 * 119.99768 * 359.97438 * 18 17 16 36 36 H 1.08001 * 119.96118 * 179.97438 * 19 18 17 37 37 H 1.08004 * 120.03692 * 179.97438 * 24 22 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 7 3.5051 1.4423 -0.0006 5 6 4.1910 1.4422 1.1864 6 1 5.1092 0.8813 1.2794 7 6 3.7049 2.1638 2.2698 8 7 2.8708 3.1603 2.0747 9 14 4.2370 1.7172 4.0039 10 1 5.4587 2.4830 4.3595 11 1 3.1484 2.0512 4.9572 12 1 4.5269 0.2624 4.0735 13 6 4.1786 1.4425 -1.1681 14 8 3.5754 1.3467 -2.2160 15 6 5.6809 1.5615 -1.1713 16 8 6.1536 1.5872 -2.5196 17 6 7.4992 1.6516 -2.7005 18 6 8.3513 1.5741 -1.6081 19 6 9.7188 1.6391 -1.7927 20 6 10.2403 1.7809 -3.0660 21 17 11.9594 1.8551 -3.2957 22 6 9.3920 1.8586 -4.1589 23 9 9.9026 1.9966 -5.4020 24 6 8.0218 1.7938 -3.9771 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 1.8933 -0.5139 -0.8899 29 1 1.8934 -0.5139 0.8900 30 1 1.6768 1.9563 0.8899 31 1 1.6768 1.9562 -0.8901 32 1 2.5887 3.7102 2.8223 33 1 6.1140 0.7075 -0.6507 34 1 5.9735 2.4818 -0.6661 35 1 7.9453 1.4630 -0.6135 36 1 10.3813 1.5792 -0.9418 37 1 7.3600 1.8546 -4.8284 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000293742655.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:40:35 Heat of formation + Delta-G solvation = -100.712552 kcal Electronic energy + Delta-G solvation = -23439.546255 eV Core-core repulsion = 19543.844541 eV Total energy + Delta-G solvation = -3895.701715 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -49.07531 -40.18486 -38.67598 -37.38596 -36.26951 -35.13345 -32.95099 -31.54276 -31.11870 -29.79115 -28.01038 -25.77136 -24.46880 -23.23058 -22.31774 -20.81985 -19.36238 -18.59386 -17.58762 -16.71496 -16.47805 -16.34194 -16.05208 -15.60112 -15.52223 -14.76737 -14.61965 -14.11668 -14.01038 -13.75256 -13.71281 -13.10641 -12.96945 -12.66776 -12.52259 -12.29724 -11.79218 -11.67909 -11.47030 -11.38483 -11.30468 -11.07462 -10.96252 -10.78147 -10.57776 -10.47952 -10.34690 -9.83823 -9.29075 -9.09767 -8.60849 -8.23072 -7.67661 -6.57346 -4.28380 0.90237 1.00774 1.94491 2.94968 3.01617 3.09956 3.13023 3.34968 3.65973 3.93369 4.05430 4.51770 4.70263 4.77978 4.83550 5.07493 5.15910 5.51907 5.60831 5.65115 5.73362 5.74259 5.81925 5.87756 5.93345 6.09049 6.14142 6.39720 6.42893 6.48751 6.59246 6.74336 6.99624 7.17521 7.32935 7.41035 7.73021 8.16296 8.87155 9.28157 9.72088 10.43654 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.017103 B = 0.003223 C = 0.002799 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1636.791193 B = 8684.995103 C =10001.356425 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.134 4.134 3 C 0.117 3.883 4 N -0.430 5.430 5 C -0.358 4.358 6 H 0.089 0.911 7 C 0.052 3.948 8 N -0.851 5.851 9 Si 0.914 3.086 10 H -0.275 1.275 11 H -0.280 1.280 12 H -0.267 1.267 13 C 0.469 3.531 14 O -0.586 6.586 15 C 0.058 3.942 16 O -0.283 6.283 17 C 0.180 3.820 18 C -0.210 4.210 19 C -0.039 4.039 20 C -0.122 4.122 21 Cl -0.061 7.061 22 C 0.149 3.851 23 F -0.125 7.125 24 C -0.184 4.184 25 H 0.045 0.955 26 H 0.051 0.949 27 H 0.050 0.950 28 H 0.053 0.947 29 H 0.059 0.941 30 H 0.106 0.894 31 H 0.055 0.945 32 H 0.274 0.726 33 H 0.083 0.917 34 H 0.094 0.906 35 H 0.150 0.850 36 H 0.145 0.855 37 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.850 -2.515 -2.989 10.596 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.173 4.173 3 C -0.006 4.006 4 N -0.149 5.149 5 C -0.485 4.485 6 H 0.107 0.893 7 C -0.156 4.156 8 N -0.486 5.486 9 Si 0.739 3.261 10 H -0.200 1.200 11 H -0.205 1.205 12 H -0.191 1.191 13 C 0.257 3.743 14 O -0.470 6.470 15 C -0.020 4.020 16 O -0.194 6.194 17 C 0.131 3.869 18 C -0.229 4.229 19 C -0.058 4.058 20 C -0.150 4.150 21 Cl -0.032 7.032 22 C 0.129 3.871 23 F -0.103 7.103 24 C -0.203 4.203 25 H 0.065 0.935 26 H 0.070 0.930 27 H 0.069 0.931 28 H 0.072 0.928 29 H 0.078 0.922 30 H 0.124 0.876 31 H 0.073 0.927 32 H 0.084 0.916 33 H 0.101 0.899 34 H 0.112 0.888 35 H 0.167 0.833 36 H 0.163 0.837 37 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 9.357 -2.439 -3.575 10.309 hybrid contribution 0.642 -0.084 1.055 1.238 sum 9.999 -2.523 -2.520 10.616 Atomic orbital electron populations 1.21660 0.96498 1.00553 1.01429 1.21822 0.94764 0.99228 1.01449 1.21487 0.80623 0.94937 1.03597 1.43331 1.04916 1.62798 1.03838 1.19397 1.10012 1.31164 0.87925 0.89318 1.25397 0.96120 0.93673 1.00426 1.69852 1.31890 1.14052 1.32847 0.86146 0.78576 0.79507 0.81831 1.20041 1.20494 1.19116 1.19749 0.87560 0.82352 0.84670 1.90585 1.69648 1.55127 1.31685 1.22590 0.95929 1.03514 0.79960 1.86196 1.16858 1.86224 1.30075 1.18828 0.83892 0.91279 0.92879 1.21461 0.93102 1.08512 0.99847 1.20716 0.94950 0.95239 0.94863 1.20735 0.85194 1.14679 0.94349 1.98359 1.10302 1.97207 1.97378 1.16902 0.90467 1.00753 0.78991 1.91537 1.87251 1.92842 1.38679 1.20223 0.92692 1.09852 0.97562 0.93541 0.92968 0.93087 0.92834 0.92198 0.87583 0.92666 0.91564 0.89926 0.88765 0.83263 0.83731 0.82915 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.32 9.91 37.16 0.37 -1.96 16 2 C -0.13 -2.63 6.26 -26.73 -0.17 -2.80 16 3 C 0.12 2.65 4.97 -4.04 -0.02 2.63 16 4 N -0.43 -10.14 2.52 -114.82 -0.29 -10.43 16 5 C -0.36 -8.23 8.58 -14.93 -0.13 -8.35 16 6 H 0.09 1.89 7.15 -52.49 -0.38 1.51 16 7 C 0.05 1.19 4.95 -17.47 -0.09 1.11 16 8 N -0.85 -20.80 11.44 55.50 0.63 -20.17 16 9 Si 0.91 17.72 29.61 -169.99 -5.03 12.69 16 10 H -0.27 -5.27 7.11 56.52 0.40 -4.87 16 11 H -0.28 -5.50 7.11 56.52 0.40 -5.10 16 12 H -0.27 -5.12 7.11 56.52 0.40 -4.71 16 13 C 0.47 10.98 7.70 -10.99 -0.08 10.90 16 14 O -0.59 -15.36 16.13 -14.35 -0.23 -15.59 16 15 C 0.06 1.08 3.99 36.00 0.14 1.22 16 16 O -0.28 -5.26 9.67 -39.41 -0.38 -5.64 16 17 C 0.18 2.72 6.68 -39.23 -0.26 2.46 16 18 C -0.21 -2.69 9.06 -39.42 -0.36 -3.05 16 19 C -0.04 -0.44 9.82 -39.58 -0.39 -0.83 16 20 C -0.12 -1.51 6.33 -39.43 -0.25 -1.76 16 21 Cl -0.06 -0.70 28.61 -51.86 -1.48 -2.18 16 22 C 0.15 1.98 7.27 -39.41 -0.29 1.70 16 23 F -0.12 -1.67 16.83 2.25 0.04 -1.63 16 24 C -0.18 -2.57 9.96 -39.38 -0.39 -2.96 16 25 H 0.05 0.65 8.14 -51.93 -0.42 0.23 16 26 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 27 H 0.05 0.80 8.14 -51.93 -0.42 0.38 16 28 H 0.05 1.10 8.14 -51.93 -0.42 0.68 16 29 H 0.06 1.18 8.14 -51.93 -0.42 0.76 16 30 H 0.11 2.53 5.49 -51.93 -0.28 2.25 16 31 H 0.05 1.31 7.50 -51.93 -0.39 0.92 16 32 H 0.27 6.31 8.32 -40.82 -0.34 5.97 16 33 H 0.08 1.36 6.80 -51.93 -0.35 1.01 16 34 H 0.09 1.69 7.96 -51.93 -0.41 1.27 16 35 H 0.15 1.74 6.29 -52.49 -0.33 1.41 16 36 H 0.14 1.28 8.06 -52.49 -0.42 0.86 16 37 H 0.15 2.02 8.06 -52.48 -0.42 1.59 16 LS Contribution 337.94 15.07 5.09 5.09 Total: -1.00 -27.22 337.94 -7.81 -35.02 By element: Atomic # 1 Polarization: 8.78 SS G_CDS: -4.24 Total: 4.54 kcal Atomic # 6 Polarization: 0.21 SS G_CDS: -1.91 Total: -1.70 kcal Atomic # 7 Polarization: -30.95 SS G_CDS: 0.34 Total: -30.60 kcal Atomic # 8 Polarization: -20.62 SS G_CDS: -0.61 Total: -21.23 kcal Atomic # 9 Polarization: -1.67 SS G_CDS: 0.04 Total: -1.63 kcal Atomic # 14 Polarization: 17.72 SS G_CDS: -5.03 Total: 12.69 kcal Atomic # 17 Polarization: -0.70 SS G_CDS: -1.48 Total: -2.18 kcal Total LS contribution 5.09 Total: 5.09 kcal Total: -27.22 -7.81 -35.02 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000293742655.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.690 kcal (2) G-P(sol) polarization free energy of solvation -27.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.907 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.806 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.023 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.713 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds