Wall clock time and date at job start Tue Mar 31 2020 10:55:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 N 1.46504 * 109.47227 * 2 1 4 4 C 1.37092 * 119.99677 * 275.12324 * 3 2 1 5 5 H 1.08004 * 119.99701 * 144.38929 * 4 3 2 6 6 C 1.38946 * 120.00225 * 324.38757 * 4 3 2 7 7 N 1.31409 * 119.99902 * 1.58838 * 6 4 3 8 8 Si 1.86801 * 120.00075 * 181.59274 * 6 4 3 9 9 H 1.48499 * 109.47520 * 59.99780 * 8 6 4 10 10 H 1.48503 * 109.47204 * 179.97438 * 8 6 4 11 11 H 1.48499 * 109.46821 * 299.99762 * 8 6 4 12 12 C 1.34775 * 120.00207 * 95.12213 * 3 2 1 13 13 O 1.21285 * 120.00455 * 187.78647 * 12 3 2 14 14 C 1.50703 * 119.99907 * 7.77743 * 12 3 2 15 15 H 1.08998 * 109.47558 * 308.32621 * 14 12 3 16 16 O 1.42902 * 109.47399 * 188.32646 * 14 12 3 17 17 C 1.53003 * 109.46820 * 68.32689 * 14 12 3 18 18 C 1.50706 * 109.47042 * 189.80580 * 17 14 12 19 19 C 1.38459 * 120.02083 * 89.99584 * 18 17 14 20 20 F 1.35103 * 120.01928 * 359.97438 * 19 18 17 21 21 C 1.38438 * 119.96437 * 180.02562 * 19 18 17 22 22 C 1.38233 * 120.00230 * 0.02562 * 21 19 18 23 23 C 1.38202 * 120.03230 * 359.97438 * 22 21 19 24 24 C 1.38293 * 120.01879 * 269.72734 * 18 17 14 25 25 Cl 1.73599 * 119.99922 * 359.97438 * 24 18 17 26 26 H 1.09005 * 109.47330 * 180.02562 * 1 2 3 27 27 H 1.09009 * 109.47224 * 299.99818 * 1 2 3 28 28 H 1.08994 * 109.47287 * 60.00021 * 1 2 3 29 29 H 1.08998 * 109.47338 * 239.99693 * 2 1 3 30 30 H 1.09006 * 109.46979 * 119.99692 * 2 1 3 31 31 H 0.97001 * 119.99851 * 180.02562 * 7 6 4 32 32 H 0.96705 * 113.99820 * 300.00079 * 16 14 12 33 33 H 1.09000 * 109.47457 * 69.80950 * 17 14 12 34 34 H 1.08997 * 109.47146 * 309.80254 * 17 14 12 35 35 H 1.08005 * 120.00467 * 180.02562 * 21 19 18 36 36 H 1.07990 * 119.98277 * 179.97438 * 22 21 19 37 37 H 1.08002 * 119.97649 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.1469 2.0628 -1.1825 5 1 1.9376 3.1217 -1.2210 6 6 2.5463 1.3914 -2.3315 7 7 2.7708 0.0972 -2.2918 8 14 2.7645 2.3284 -3.9327 9 1 3.7977 3.3799 -3.7542 10 1 3.1933 1.3901 -5.0009 11 1 1.4763 2.9601 -4.3159 12 6 2.3412 1.9819 1.1625 13 8 2.6095 3.1646 1.1801 14 6 2.3687 1.1840 2.4407 15 1 1.4288 0.6434 2.5519 16 8 2.5441 2.0675 3.5501 17 6 3.5283 0.1868 2.3945 18 6 3.4150 -0.7694 3.5539 19 6 2.7010 -1.9473 3.4131 20 9 2.1050 -2.2399 2.2365 21 6 2.5972 -2.8245 4.4790 22 6 3.2058 -2.5241 5.6833 23 6 3.9185 -1.3483 5.8237 24 6 4.0288 -0.4734 4.7573 25 17 4.9306 0.9995 4.9325 26 1 -0.3634 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8901 28 1 -0.3633 0.5138 -0.8899 29 1 1.8933 -0.5139 -0.8899 30 1 1.8933 -0.5138 0.8901 31 1 3.0501 -0.3715 -3.0938 32 1 3.3621 2.5823 3.5174 33 1 4.4736 0.7256 2.4590 34 1 3.4909 -0.3708 1.4587 35 1 2.0408 -3.7437 4.3698 36 1 3.1244 -3.2084 6.5147 37 1 4.3940 -1.1147 6.7649 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000355618259.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:55:00 Heat of formation + Delta-G solvation = -103.181390 kcal Electronic energy + Delta-G solvation = -25089.366438 eV Core-core repulsion = 21193.557667 eV Total energy + Delta-G solvation = -3895.808772 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -48.89297 -39.65861 -38.74320 -36.47511 -36.12076 -34.90966 -32.90943 -31.83228 -30.51259 -29.40360 -28.77959 -25.47272 -23.89941 -22.90859 -22.07339 -21.31231 -19.41696 -17.78060 -17.14600 -16.94280 -16.37780 -16.00376 -15.74658 -15.39806 -14.82838 -14.74388 -14.58055 -13.99420 -13.74768 -13.53360 -13.17699 -13.10367 -12.77068 -12.67772 -12.27340 -11.77694 -11.69680 -11.50682 -11.41581 -11.38025 -11.32222 -11.05003 -10.73781 -10.64961 -10.37698 -10.24034 -10.23438 -9.76887 -9.02454 -8.88349 -8.78479 -8.25178 -7.55073 -6.12774 -4.04253 0.90261 0.96694 2.04349 3.18238 3.23838 3.27439 3.31300 3.77339 4.12008 4.17922 4.48339 4.66219 4.70071 4.83034 4.95383 5.06959 5.08336 5.32305 5.43577 5.48168 5.69685 5.81278 5.85770 5.95171 6.04647 6.07240 6.25381 6.29304 6.45497 6.47907 6.63590 6.71336 7.09042 7.38330 7.81859 7.99423 8.27470 8.58972 9.14687 9.40745 9.93510 10.69272 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.018210 B = 0.004831 C = 0.004249 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1537.273638 B = 5794.464635 C = 6587.820842 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.045 3.955 3 N -0.436 5.436 4 C -0.295 4.295 5 H 0.091 0.909 6 C 0.033 3.967 7 N -0.883 5.883 8 Si 0.931 3.069 9 H -0.273 1.273 10 H -0.283 1.283 11 H -0.274 1.274 12 C 0.432 3.568 13 O -0.578 6.578 14 C 0.106 3.894 15 H 0.106 0.894 16 O -0.541 6.541 17 C -0.119 4.119 18 C -0.095 4.095 19 C 0.115 3.885 20 F -0.122 7.122 21 C -0.151 4.151 22 C -0.088 4.088 23 C -0.123 4.123 24 C 0.004 3.996 25 Cl -0.051 7.051 26 H 0.047 0.953 27 H 0.031 0.969 28 H 0.055 0.945 29 H 0.160 0.840 30 H 0.052 0.948 31 H 0.269 0.731 32 H 0.375 0.625 33 H 0.090 0.910 34 H 0.107 0.893 35 H 0.140 0.860 36 H 0.139 0.861 37 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.947 -9.093 13.433 16.337 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.212 4.212 2 C -0.078 4.078 3 N -0.156 5.156 4 C -0.423 4.423 5 H 0.109 0.891 6 C -0.168 4.168 7 N -0.524 5.524 8 Si 0.757 3.243 9 H -0.198 1.198 10 H -0.209 1.209 11 H -0.200 1.200 12 C 0.219 3.781 13 O -0.462 6.462 14 C 0.043 3.957 15 H 0.124 0.876 16 O -0.346 6.346 17 C -0.156 4.156 18 C -0.097 4.097 19 C 0.095 3.905 20 F -0.100 7.100 21 C -0.170 4.170 22 C -0.106 4.106 23 C -0.142 4.142 24 C -0.023 4.023 25 Cl -0.022 7.022 26 H 0.066 0.934 27 H 0.050 0.950 28 H 0.074 0.926 29 H 0.176 0.824 30 H 0.070 0.930 31 H 0.081 0.919 32 H 0.223 0.777 33 H 0.108 0.892 34 H 0.126 0.874 35 H 0.158 0.842 36 H 0.157 0.843 37 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges 1.621 -8.773 13.413 16.109 hybrid contribution 0.424 0.495 -1.113 1.289 sum 2.045 -8.278 12.300 14.967 Atomic orbital electron populations 1.22042 0.98531 0.99851 1.00809 1.22875 0.92509 0.85369 1.07078 1.43573 1.54884 1.12426 1.04676 1.19506 1.42828 0.94705 0.85239 0.89145 1.25415 0.95673 0.95684 1.00005 1.69028 1.46657 1.07360 1.29396 0.85926 0.79021 0.79030 0.80290 1.19800 1.20863 1.19956 1.20956 0.82493 0.88800 0.85865 1.90520 1.53785 1.15746 1.86148 1.21651 0.98000 0.89264 0.86813 0.87613 1.86485 1.46993 1.57805 1.43294 1.21456 1.00795 0.96693 0.96690 1.19736 0.98593 0.95344 0.96028 1.17390 0.96269 0.94281 0.82566 1.91560 1.81021 1.92958 1.44459 1.21219 1.02704 1.00435 0.92639 1.20884 0.96319 0.96384 0.97036 1.21064 1.00861 0.94081 0.98209 1.20514 0.97880 0.89662 0.94263 1.98371 1.72450 1.33993 1.97339 0.93374 0.95016 0.92574 0.82378 0.93003 0.91921 0.77662 0.89163 0.87442 0.84181 0.84299 0.84462 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.12 10.21 37.16 0.38 -2.74 16 2 C 0.04 1.00 5.11 -4.04 -0.02 0.98 16 3 N -0.44 -11.11 2.59 -114.81 -0.30 -11.40 16 4 C -0.29 -8.13 9.07 -14.94 -0.14 -8.26 16 5 H 0.09 2.62 7.58 -52.48 -0.40 2.22 16 6 C 0.03 0.86 5.40 -17.47 -0.09 0.76 16 7 N -0.88 -22.80 10.23 55.50 0.57 -22.23 16 8 Si 0.93 20.70 29.55 -169.99 -5.02 15.67 16 9 H -0.27 -6.16 7.11 56.52 0.40 -5.76 16 10 H -0.28 -6.12 7.11 56.52 0.40 -5.72 16 11 H -0.27 -6.03 7.11 56.52 0.40 -5.63 16 12 C 0.43 10.74 6.94 -10.98 -0.08 10.67 16 13 O -0.58 -16.27 16.13 -14.22 -0.23 -16.50 16 14 C 0.11 2.11 2.50 -27.88 -0.07 2.04 16 15 H 0.11 2.08 7.44 -51.93 -0.39 1.69 16 16 O -0.54 -10.45 11.64 -55.00 -0.64 -11.09 16 17 C -0.12 -2.09 4.02 -27.88 -0.11 -2.20 16 18 C -0.10 -1.43 5.01 -104.52 -0.52 -1.95 16 19 C 0.11 1.60 7.24 -39.43 -0.29 1.31 16 20 F -0.12 -1.89 14.74 2.25 0.03 -1.85 16 21 C -0.15 -1.61 10.03 -39.51 -0.40 -2.01 16 22 C -0.09 -0.80 10.04 -39.60 -0.40 -1.20 16 23 C -0.12 -1.28 9.83 -39.54 -0.39 -1.67 16 24 C 0.00 0.05 6.20 -39.51 -0.24 -0.20 16 25 Cl -0.05 -0.66 25.14 -51.86 -1.30 -1.97 16 26 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 27 H 0.03 0.61 8.14 -51.92 -0.42 0.19 16 28 H 0.06 1.21 8.14 -51.93 -0.42 0.79 16 29 H 0.16 3.91 4.47 -56.27 -0.25 3.66 16 30 H 0.05 1.05 2.57 -51.93 -0.13 0.92 16 31 H 0.27 6.60 8.31 -40.82 -0.34 6.26 16 32 H 0.37 6.85 7.75 45.56 0.35 7.20 16 33 H 0.09 1.57 6.89 -51.93 -0.36 1.22 16 34 H 0.11 2.06 5.53 -51.93 -0.29 1.78 16 35 H 0.14 1.16 8.06 -52.48 -0.42 0.74 16 36 H 0.14 0.80 8.06 -52.49 -0.42 0.38 16 37 H 0.14 1.10 8.06 -52.49 -0.42 0.68 16 LS Contribution 322.08 15.07 4.85 4.85 Total: -1.00 -30.41 322.08 -7.54 -37.95 By element: Atomic # 1 Polarization: 14.16 SS G_CDS: -3.13 Total: 11.03 kcal Atomic # 6 Polarization: -2.09 SS G_CDS: -2.37 Total: -4.46 kcal Atomic # 7 Polarization: -33.90 SS G_CDS: 0.27 Total: -33.63 kcal Atomic # 8 Polarization: -26.72 SS G_CDS: -0.87 Total: -27.59 kcal Atomic # 9 Polarization: -1.89 SS G_CDS: 0.03 Total: -1.85 kcal Atomic # 14 Polarization: 20.70 SS G_CDS: -5.02 Total: 15.67 kcal Atomic # 17 Polarization: -0.66 SS G_CDS: -1.30 Total: -1.97 kcal Total LS contribution 4.85 Total: 4.85 kcal Total: -30.41 -7.54 -37.95 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000355618259.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -65.228 kcal (2) G-P(sol) polarization free energy of solvation -30.415 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.643 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.538 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.953 kcal (6) G-S(sol) free energy of system = (1) + (5) -103.181 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds