Wall clock time and date at job start Tue Mar 31 2020 11:00:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35955 * 116.99632 * 2 1 4 4 C 1.38881 * 119.94320 * 0.02562 * 3 2 1 5 5 C 1.38248 * 120.27431 * 179.97438 * 4 3 2 6 6 Cl 1.73601 * 119.92457 * 179.97438 * 5 4 3 7 7 C 1.38438 * 120.15234 * 359.97438 * 5 4 3 8 8 F 1.35102 * 120.05877 * 180.02562 * 7 5 4 9 9 C 1.39771 * 119.87982 * 0.02562 * 7 5 4 10 10 C 1.47705 * 120.13357 * 179.97438 * 9 7 5 11 11 O 1.21571 * 119.99600 * 0.02562 * 10 9 7 12 12 N 1.34771 * 120.00098 * 179.97438 * 10 9 7 13 13 C 1.46503 * 120.00127 * 180.02562 * 12 10 9 14 14 C 1.52998 * 109.47215 * 180.02562 * 13 12 10 15 15 C 1.53003 * 109.47161 * 179.97438 * 14 13 12 16 16 C 1.50696 * 109.46920 * 179.97438 * 15 14 13 17 17 H 1.07998 * 120.00176 * 0.02562 * 16 15 14 18 18 C 1.37881 * 119.99793 * 180.02562 * 16 15 14 19 19 N 1.31522 * 120.00014 * 359.97438 * 18 16 15 20 20 Si 1.86792 * 120.00132 * 180.02562 * 18 16 15 21 21 H 1.48498 * 109.47592 * 89.99704 * 20 18 16 22 22 H 1.48501 * 109.47157 * 209.99818 * 20 18 16 23 23 H 1.48506 * 109.47181 * 329.99678 * 20 18 16 24 24 C 1.38340 * 119.93631 * 179.72581 * 3 2 1 25 25 H 1.08996 * 109.47352 * 299.99784 * 1 2 3 26 26 H 1.08996 * 109.47452 * 60.00237 * 1 2 3 27 27 H 1.09005 * 109.47329 * 179.97438 * 1 2 3 28 28 H 1.08001 * 119.86678 * 359.97438 * 4 3 2 29 29 H 0.96997 * 119.99982 * 0.02562 * 12 10 9 30 30 H 1.09004 * 109.46761 * 300.00419 * 13 12 10 31 31 H 1.08994 * 109.47267 * 59.99796 * 13 12 10 32 32 H 1.08999 * 109.46747 * 299.99736 * 14 13 12 33 33 H 1.09003 * 109.47177 * 59.99914 * 14 13 12 34 34 H 1.09004 * 109.46951 * 300.00302 * 15 14 13 35 35 H 1.09003 * 109.46982 * 59.99995 * 15 14 13 36 36 H 0.96994 * 119.99884 * 180.02562 * 19 18 16 37 37 H 1.08000 * 120.07822 * 359.97438 * 24 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 1.2885 2.3754 0.0005 5 6 1.9090 3.6108 0.0011 6 17 0.9531 5.0599 0.0011 7 6 3.2908 3.6950 0.0016 8 9 3.8951 4.9033 0.0027 9 6 4.0595 2.5277 0.0011 10 6 5.5342 2.6110 0.0011 11 8 6.0816 3.6965 0.0020 12 7 6.2728 1.4837 0.0011 13 6 7.7355 1.5663 0.0016 14 6 8.3261 0.1549 0.0009 15 6 9.8537 0.2412 0.0008 16 6 10.4353 -1.1490 0.0007 17 1 9.7809 -2.0081 0.0002 18 6 11.8030 -1.3240 0.0012 19 7 12.5999 -0.2778 0.0012 20 14 12.5240 -3.0472 0.0003 21 1 12.7156 -3.5030 -1.3999 22 1 13.8333 -3.0363 0.7009 23 1 11.5962 -3.9724 0.6994 24 6 3.4277 1.2824 0.0057 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 0.2102 2.3152 0.0005 29 1 5.8360 0.6177 0.0007 30 1 8.0696 2.1002 -0.8881 31 1 8.0690 2.0996 0.8918 32 1 7.9920 -0.3791 0.8904 33 1 7.9926 -0.3780 -0.8896 34 1 10.1874 0.7753 -0.8889 35 1 10.1875 0.7743 0.8911 36 1 13.5620 -0.4009 0.0012 37 1 4.0162 0.3768 0.0106 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000412011284.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:00:29 Heat of formation + Delta-G solvation = -108.943961 kcal Electronic energy + Delta-G solvation = -22790.135971 eV Core-core repulsion = 18894.077316 eV Total energy + Delta-G solvation = -3896.058655 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -49.05780 -40.83543 -39.54626 -37.82545 -36.72953 -35.51095 -33.44594 -32.10573 -30.90373 -30.39338 -27.84982 -26.82636 -24.54459 -23.41719 -22.50796 -20.88707 -20.39220 -18.87836 -17.77468 -17.62058 -16.81671 -16.49360 -16.37828 -15.90111 -15.61131 -15.42027 -15.23189 -14.88235 -14.45850 -13.98585 -13.89401 -13.54026 -13.38839 -13.33261 -12.73927 -12.43519 -12.30311 -11.89165 -11.79473 -11.75918 -11.53523 -11.13120 -10.91519 -10.76262 -10.61811 -10.10239 -9.89712 -9.60606 -9.44533 -9.14008 -8.89587 -8.65057 -8.38143 -6.02758 -4.05999 0.09601 0.51360 1.43600 2.43506 2.59389 3.10884 3.28492 3.30361 3.36912 3.39536 3.65413 4.10052 4.23913 4.36847 4.43577 4.59079 4.62886 4.73681 4.84613 5.01105 5.21409 5.33101 5.38672 5.45746 5.65561 5.73346 5.89387 6.11810 6.35210 6.55768 6.65862 6.76268 6.96213 7.51960 7.62134 7.74234 7.95736 8.17567 8.36696 9.00673 9.58302 11.08544 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.020520 B = 0.002466 C = 0.002207 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1364.226478 B =11351.616045 C =12684.791376 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.022 3.978 2 O -0.305 6.305 3 C 0.126 3.874 4 C -0.154 4.154 5 C -0.046 4.046 6 Cl -0.038 7.038 7 C 0.132 3.868 8 F -0.101 7.101 9 C -0.114 4.114 10 C 0.552 3.448 11 O -0.519 6.519 12 N -0.715 5.715 13 C 0.116 3.884 14 C -0.121 4.121 15 C 0.024 3.976 16 C -0.523 4.523 17 H 0.056 0.944 18 C 0.057 3.943 19 N -0.894 5.894 20 Si 0.893 3.107 21 H -0.280 1.280 22 H -0.286 1.286 23 H -0.274 1.274 24 C -0.087 4.087 25 H 0.059 0.941 26 H 0.059 0.941 27 H 0.106 0.894 28 H 0.152 0.848 29 H 0.399 0.601 30 H 0.069 0.931 31 H 0.069 0.931 32 H 0.055 0.945 33 H 0.055 0.945 34 H 0.020 0.980 35 H 0.020 0.980 36 H 0.261 0.739 37 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -29.519 3.693 0.006 29.749 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.073 4.073 2 O -0.218 6.218 3 C 0.080 3.920 4 C -0.173 4.173 5 C -0.074 4.074 6 Cl -0.009 7.009 7 C 0.111 3.889 8 F -0.079 7.079 9 C -0.119 4.119 10 C 0.337 3.663 11 O -0.395 6.395 12 N -0.366 5.366 13 C -0.006 4.006 14 C -0.159 4.159 15 C -0.014 4.014 16 C -0.561 4.561 17 H 0.074 0.926 18 C -0.145 4.145 19 N -0.533 5.533 20 Si 0.721 3.279 21 H -0.207 1.207 22 H -0.212 1.212 23 H -0.199 1.199 24 C -0.106 4.106 25 H 0.078 0.922 26 H 0.078 0.922 27 H 0.125 0.875 28 H 0.170 0.830 29 H 0.234 0.766 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.074 0.926 33 H 0.074 0.926 34 H 0.038 0.962 35 H 0.038 0.962 36 H 0.071 0.929 37 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -28.871 4.511 0.012 29.222 hybrid contribution -0.044 -0.891 -0.013 0.892 sum -28.916 3.620 -0.001 29.141 Atomic orbital electron populations 1.23197 0.77626 1.04778 1.01691 1.86170 1.21939 1.25210 1.88443 1.18596 0.91701 0.84382 0.97371 1.21133 1.01342 0.89613 1.05253 1.20567 0.89873 0.89647 1.07312 1.98407 1.70611 1.35109 1.96768 1.17201 0.88232 0.81389 1.02118 1.91646 1.83066 1.40334 1.92816 1.19927 0.94736 0.91702 1.05518 1.17756 0.85280 0.85136 0.78156 1.90874 1.72547 1.27328 1.48774 1.46114 1.08629 1.07932 1.73911 1.21753 0.76194 1.00229 1.02458 1.21910 1.00478 0.92538 1.01024 1.19032 0.87170 0.97447 0.97742 1.21194 0.91512 0.92394 1.51011 0.92616 1.25033 0.97342 0.96837 0.95263 1.69965 1.03636 1.29155 1.50495 0.86578 0.78550 0.84667 0.78099 1.20655 1.21209 1.19887 1.20587 0.91859 0.97447 1.00717 0.92202 0.92207 0.87524 0.83006 0.76605 0.91311 0.91304 0.92577 0.92582 0.96209 0.96200 0.92899 0.82832 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.08 9.81 101.05 0.99 1.07 16 2 O -0.30 -2.23 10.49 -19.60 -0.21 -2.44 16 3 C 0.13 1.04 6.68 -39.31 -0.26 0.78 16 4 C -0.15 -1.18 8.81 -39.34 -0.35 -1.52 16 5 C -0.05 -0.46 6.32 -39.50 -0.25 -0.71 16 6 Cl -0.04 -0.35 28.61 -51.86 -1.48 -1.84 16 7 C 0.13 1.67 7.26 -38.93 -0.28 1.38 16 8 F -0.10 -1.53 15.10 2.25 0.03 -1.49 16 9 C -0.11 -1.40 5.88 -104.93 -0.62 -2.02 16 10 C 0.55 8.47 7.77 -12.40 -0.10 8.37 16 11 O -0.52 -10.05 15.33 5.30 0.08 -9.97 16 12 N -0.71 -10.04 5.51 -61.30 -0.34 -10.38 16 13 C 0.12 1.99 5.67 -4.04 -0.02 1.96 16 14 C -0.12 -2.30 5.27 -26.73 -0.14 -2.44 16 15 C 0.02 0.59 4.97 -27.88 -0.14 0.45 16 16 C -0.52 -14.43 9.11 -34.44 -0.31 -14.74 16 17 H 0.06 1.48 7.74 -52.49 -0.41 1.07 16 18 C 0.06 1.61 5.46 -17.81 -0.10 1.51 16 19 N -0.89 -26.69 13.29 55.43 0.74 -25.96 16 20 Si 0.89 21.34 29.54 -169.99 -5.02 16.31 16 21 H -0.28 -6.61 7.11 56.52 0.40 -6.20 16 22 H -0.29 -6.80 7.11 56.52 0.40 -6.40 16 23 H -0.27 -6.37 7.11 56.52 0.40 -5.97 16 24 C -0.09 -0.81 9.47 -39.02 -0.37 -1.18 16 25 H 0.06 0.16 7.65 -51.93 -0.40 -0.24 16 26 H 0.06 0.16 7.66 -51.93 -0.40 -0.24 16 27 H 0.11 0.21 8.14 -51.93 -0.42 -0.21 16 28 H 0.15 0.74 6.27 -52.49 -0.33 0.41 16 29 H 0.40 4.35 6.50 -40.82 -0.27 4.09 16 30 H 0.07 1.25 8.14 -51.93 -0.42 0.83 16 31 H 0.07 1.25 8.14 -51.93 -0.42 0.83 16 32 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 33 H 0.06 1.01 8.14 -51.93 -0.42 0.59 16 34 H 0.02 0.52 8.14 -51.93 -0.42 0.10 16 35 H 0.02 0.53 8.14 -51.93 -0.42 0.10 16 36 H 0.26 7.37 8.31 -40.82 -0.34 7.03 16 37 H 0.15 1.15 6.40 -52.49 -0.34 0.81 16 LS Contribution 339.19 15.07 5.11 5.11 Total: -1.00 -33.31 339.19 -7.26 -40.56 By element: Atomic # 1 Polarization: 1.39 SS G_CDS: -4.23 Total: -2.83 kcal Atomic # 6 Polarization: -5.13 SS G_CDS: -1.95 Total: -7.08 kcal Atomic # 7 Polarization: -36.74 SS G_CDS: 0.40 Total: -36.34 kcal Atomic # 8 Polarization: -12.29 SS G_CDS: -0.12 Total: -12.41 kcal Atomic # 9 Polarization: -1.53 SS G_CDS: 0.03 Total: -1.49 kcal Atomic # 14 Polarization: 21.34 SS G_CDS: -5.02 Total: 16.31 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -1.48 Total: -1.84 kcal Total LS contribution 5.11 Total: 5.11 kcal Total: -33.31 -7.26 -40.56 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000412011284.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -68.382 kcal (2) G-P(sol) polarization free energy of solvation -33.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.256 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.562 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds