Wall clock time and date at job start Tue Mar 31 2020 10:54:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 N 1.46504 * 109.47162 * 2 1 4 4 C 1.46494 * 120.00095 * 274.97127 * 3 2 1 5 5 C 1.50705 * 109.46738 * 269.99476 * 4 3 2 6 6 H 1.07993 * 120.00081 * 0.02562 * 5 4 3 7 7 C 1.37874 * 119.99733 * 179.97438 * 5 4 3 8 8 N 1.31514 * 120.00373 * 0.02562 * 7 5 4 9 9 Si 1.86806 * 120.00001 * 180.02562 * 7 5 4 10 10 H 1.48500 * 109.47005 * 90.00199 * 9 7 5 11 11 H 1.48497 * 109.47081 * 210.00430 * 9 7 5 12 12 H 1.48497 * 109.46938 * 329.99994 * 9 7 5 13 13 C 1.34780 * 119.99385 * 94.96808 * 3 2 1 14 14 O 1.21570 * 119.99568 * 185.55902 * 13 3 2 15 15 C 1.47698 * 120.00593 * 5.55776 * 13 3 2 16 16 C 1.39650 * 120.13219 * 55.02083 * 15 13 3 17 17 C 1.38337 * 119.83973 * 180.27496 * 16 15 13 18 18 O 1.35953 * 119.94241 * 179.73460 * 17 16 15 19 19 C 1.42890 * 117.00281 * 179.72457 * 18 17 16 20 20 C 1.38887 * 120.11918 * 359.45569 * 17 16 15 21 21 C 1.38250 * 120.26995 * 0.27901 * 20 17 16 22 22 Cl 1.73605 * 119.91917 * 179.97438 * 21 20 17 23 23 C 1.38432 * 120.15768 * 359.97438 * 21 20 17 24 24 F 1.35100 * 120.05567 * 180.02562 * 23 21 20 25 25 H 1.09004 * 109.47195 * 299.99938 * 1 2 3 26 26 H 1.09008 * 109.47228 * 59.99568 * 1 2 3 27 27 H 1.08996 * 109.47451 * 179.97438 * 1 2 3 28 28 H 1.08995 * 109.47039 * 240.00633 * 2 1 3 29 29 H 1.08993 * 109.47086 * 120.00025 * 2 1 3 30 30 H 1.08999 * 109.47314 * 29.99622 * 4 3 2 31 31 H 1.08998 * 109.47258 * 149.99908 * 4 3 2 32 32 H 0.97005 * 120.00255 * 180.02562 * 8 7 5 33 33 H 1.08000 * 120.07830 * 0.03473 * 16 15 13 34 34 H 1.09007 * 109.47429 * 180.02562 * 19 18 17 35 35 H 1.08999 * 109.47467 * 300.00047 * 19 18 17 36 36 H 1.09005 * 109.47210 * 60.00185 * 19 18 17 37 37 H 1.08003 * 119.86475 * 180.25128 * 20 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3813 0.0000 4 6 2.1588 2.1085 -1.2639 5 6 3.5417 1.8861 -1.8203 6 1 4.2452 1.2648 -1.2861 7 6 3.9082 2.4749 -3.0119 8 7 3.0513 3.2311 -3.6627 9 14 5.6220 2.1987 -3.7020 10 1 5.6144 1.0025 -4.5818 11 1 6.0369 3.3885 -4.4876 12 1 6.5769 1.9856 -2.5849 13 6 2.3382 1.9828 1.1629 14 8 2.6464 3.1587 1.1743 15 6 2.3143 1.2135 2.4235 16 6 3.0556 0.0357 2.5402 17 6 3.0244 -0.6831 3.7217 18 8 3.7410 -1.8328 3.8357 19 6 3.6680 -2.5215 5.0855 20 6 2.2668 -0.2294 4.7937 21 6 1.5355 0.9389 4.6853 22 17 0.5911 1.4973 6.0307 23 6 1.5544 1.6643 3.5064 24 9 0.8394 2.8059 3.4029 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 1.8933 -0.5137 -0.8900 29 1 1.8933 -0.5138 0.8899 30 1 1.4179 1.7457 -1.9762 31 1 2.0043 3.1733 -1.0895 32 1 3.3091 3.6451 -4.5012 33 1 3.6488 -0.3151 1.7086 34 1 4.2845 -3.4194 5.0422 35 1 4.0305 -1.8704 5.8810 36 1 2.6336 -2.8000 5.2871 37 1 2.2485 -0.7917 5.7156 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000412172339.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:54:25 Heat of formation + Delta-G solvation = -90.589257 kcal Electronic energy + Delta-G solvation = -24334.319591 eV Core-core repulsion = 20439.056855 eV Total energy + Delta-G solvation = -3895.262736 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -48.84241 -40.57449 -39.15217 -37.52477 -36.43154 -35.39941 -32.86082 -31.46837 -30.15096 -30.12607 -27.68697 -27.09458 -24.30926 -23.35922 -22.69826 -22.07976 -19.54726 -17.86151 -17.56116 -17.28451 -16.54312 -16.39276 -16.14274 -15.72814 -15.37989 -15.27624 -14.59665 -14.36985 -14.22412 -13.56003 -13.36471 -13.19683 -13.18280 -13.05529 -12.45156 -12.33799 -12.18380 -12.03058 -11.75086 -11.41130 -11.29544 -11.25325 -10.95974 -10.87916 -10.70548 -10.53000 -10.16675 -9.67995 -9.34567 -9.04703 -8.45292 -8.36754 -7.75483 -6.06392 -4.11838 0.55792 0.82494 1.68416 2.78838 2.96658 3.29543 3.36530 3.40353 3.43415 3.72422 3.99406 4.39978 4.46552 4.52066 4.71636 4.79738 4.81615 5.02113 5.12122 5.28357 5.29930 5.36423 5.51417 5.62774 5.74131 5.77659 5.87139 6.04389 6.18734 6.23208 6.49939 6.93910 6.99933 7.39966 7.46223 7.89080 8.18797 8.26614 8.78079 8.95694 9.53273 11.01720 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.016120 B = 0.004150 C = 0.003719 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1736.530984 B = 6745.445628 C = 7526.191782 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.167 4.167 2 C 0.094 3.906 3 N -0.583 5.583 4 C 0.245 3.755 5 C -0.530 4.530 6 H 0.059 0.941 7 C 0.063 3.937 8 N -0.893 5.893 9 Si 0.898 3.102 10 H -0.280 1.280 11 H -0.285 1.285 12 H -0.273 1.273 13 C 0.551 3.449 14 O -0.518 6.518 15 C -0.092 4.092 16 C -0.089 4.089 17 C 0.127 3.873 18 O -0.305 6.305 19 C 0.023 3.977 20 C -0.166 4.166 21 C -0.040 4.040 22 Cl -0.045 7.045 23 C 0.114 3.886 24 F -0.113 7.113 25 H 0.049 0.951 26 H 0.063 0.937 27 H 0.061 0.939 28 H 0.085 0.915 29 H 0.073 0.927 30 H 0.037 0.963 31 H 0.047 0.953 32 H 0.264 0.736 33 H 0.157 0.843 34 H 0.104 0.896 35 H 0.058 0.942 36 H 0.058 0.942 37 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.724 -13.162 18.287 22.837 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.226 4.226 2 C -0.029 4.029 3 N -0.314 5.314 4 C 0.127 3.873 5 C -0.569 4.569 6 H 0.077 0.923 7 C -0.140 4.140 8 N -0.531 5.531 9 Si 0.726 3.274 10 H -0.206 1.206 11 H -0.211 1.211 12 H -0.198 1.198 13 C 0.335 3.665 14 O -0.395 6.395 15 C -0.096 4.096 16 C -0.108 4.108 17 C 0.081 3.919 18 O -0.218 6.218 19 C -0.072 4.072 20 C -0.186 4.186 21 C -0.068 4.068 22 Cl -0.016 7.016 23 C 0.093 3.907 24 F -0.091 7.091 25 H 0.068 0.932 26 H 0.082 0.918 27 H 0.080 0.920 28 H 0.104 0.896 29 H 0.091 0.909 30 H 0.055 0.945 31 H 0.065 0.935 32 H 0.074 0.926 33 H 0.175 0.825 34 H 0.122 0.878 35 H 0.076 0.924 36 H 0.077 0.923 37 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -3.578 -12.409 18.051 22.195 hybrid contribution 0.603 0.031 -0.030 0.604 sum -2.975 -12.378 18.022 22.065 Atomic orbital electron populations 1.22174 0.96480 1.01497 1.02421 1.21703 0.94046 0.83982 1.03204 1.48201 1.61950 1.13659 1.07550 1.19373 0.97075 0.93243 0.77636 1.21412 0.98444 1.30874 1.06143 0.92313 1.24926 0.97550 0.94803 0.96686 1.69933 1.35034 1.31876 1.16303 0.86489 0.84262 0.77669 0.78977 1.20592 1.21068 1.19834 1.17695 0.79433 0.86658 0.82700 1.90820 1.47717 1.15010 1.85928 1.20139 0.98158 0.95948 0.95405 1.20550 1.00384 0.92655 0.97239 1.18596 0.92564 0.87396 0.93329 1.86161 1.65068 1.33882 1.36726 1.23155 1.02659 0.96982 0.84390 1.21010 1.00344 0.97018 1.00178 1.20492 1.00197 0.96880 0.89193 1.98388 1.70662 1.89069 1.43463 1.17154 0.95881 0.85052 0.92642 1.91589 1.75080 1.46176 1.96247 0.93192 0.91832 0.92044 0.89643 0.90899 0.94535 0.93508 0.92638 0.82526 0.87770 0.92355 0.92316 0.83301 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.39 10.24 37.16 0.38 -2.01 16 2 C 0.09 1.54 5.95 -4.04 -0.02 1.51 16 3 N -0.58 -12.42 2.46 -176.24 -0.43 -12.85 16 4 C 0.25 6.36 5.23 -5.19 -0.03 6.34 16 5 C -0.53 -14.77 9.39 -34.44 -0.32 -15.09 16 6 H 0.06 1.61 7.81 -52.49 -0.41 1.20 16 7 C 0.06 1.77 5.46 -17.82 -0.10 1.67 16 8 N -0.89 -26.31 13.29 55.43 0.74 -25.58 16 9 Si 0.90 21.60 29.54 -169.99 -5.02 16.58 16 10 H -0.28 -6.51 7.11 56.52 0.40 -6.11 16 11 H -0.28 -6.83 7.11 56.52 0.40 -6.43 16 12 H -0.27 -6.55 7.11 56.52 0.40 -6.15 16 13 C 0.55 12.00 6.85 -12.39 -0.08 11.92 16 14 O -0.52 -13.61 16.43 5.30 0.09 -13.52 16 15 C -0.09 -1.57 4.91 -104.93 -0.51 -2.08 16 16 C -0.09 -1.26 7.41 -39.02 -0.29 -1.54 16 17 C 0.13 1.47 6.68 -39.30 -0.26 1.21 16 18 O -0.31 -3.11 10.49 -19.59 -0.21 -3.31 16 19 C 0.02 0.13 9.81 101.05 0.99 1.13 16 20 C -0.17 -1.75 8.81 -39.34 -0.35 -2.09 16 21 C -0.04 -0.51 6.32 -39.51 -0.25 -0.76 16 22 Cl -0.04 -0.52 28.61 -51.86 -1.48 -2.00 16 23 C 0.11 1.84 7.24 -38.94 -0.28 1.55 16 24 F -0.11 -2.05 16.23 2.25 0.04 -2.01 16 25 H 0.05 0.72 8.14 -51.93 -0.42 0.30 16 26 H 0.06 0.98 8.14 -51.92 -0.42 0.56 16 27 H 0.06 0.70 8.14 -51.93 -0.42 0.28 16 28 H 0.09 1.39 8.11 -51.93 -0.42 0.97 16 29 H 0.07 1.02 4.42 -51.93 -0.23 0.79 16 30 H 0.04 0.95 8.07 -51.93 -0.42 0.53 16 31 H 0.05 1.38 7.35 -51.93 -0.38 1.00 16 32 H 0.26 7.35 8.31 -40.82 -0.34 7.01 16 33 H 0.16 2.17 7.58 -52.49 -0.40 1.77 16 34 H 0.10 0.41 8.14 -51.93 -0.42 -0.01 16 35 H 0.06 0.29 7.66 -51.93 -0.40 -0.11 16 36 H 0.06 0.27 7.66 -51.93 -0.40 -0.13 16 37 H 0.15 1.10 6.27 -52.48 -0.33 0.77 16 LS Contribution 338.44 15.07 5.10 5.10 Total: -1.00 -33.08 338.44 -6.52 -39.60 By element: Atomic # 1 Polarization: 0.46 SS G_CDS: -4.21 Total: -3.75 kcal Atomic # 6 Polarization: 2.88 SS G_CDS: -1.13 Total: 1.75 kcal Atomic # 7 Polarization: -38.73 SS G_CDS: 0.30 Total: -38.43 kcal Atomic # 8 Polarization: -16.72 SS G_CDS: -0.12 Total: -16.84 kcal Atomic # 9 Polarization: -2.05 SS G_CDS: 0.04 Total: -2.01 kcal Atomic # 14 Polarization: 21.60 SS G_CDS: -5.02 Total: 16.58 kcal Atomic # 17 Polarization: -0.52 SS G_CDS: -1.48 Total: -2.00 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -33.08 -6.52 -39.60 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000412172339.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.989 kcal (2) G-P(sol) polarization free energy of solvation -33.079 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.068 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.600 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.589 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds