Wall clock time and date at job start Tue Mar 31 2020 10:38:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52995 * 109.46924 * 2 1 4 4 H 1.08999 * 109.47259 * 55.00738 * 3 2 1 5 5 C 1.50709 * 109.47079 * 175.00118 * 3 2 1 6 6 H 1.07995 * 119.99707 * 120.00020 * 5 3 2 7 7 C 1.37877 * 119.99867 * 300.00531 * 5 3 2 8 8 N 1.31518 * 119.99898 * 359.97438 * 7 5 3 9 9 Si 1.86795 * 119.99943 * 180.02562 * 7 5 3 10 10 H 1.48498 * 109.47452 * 59.99506 * 9 7 5 11 11 H 1.48503 * 109.47280 * 179.97438 * 9 7 5 12 12 H 1.48505 * 109.46831 * 299.99694 * 9 7 5 13 13 N 1.46502 * 109.47523 * 294.99873 * 3 2 1 14 14 C 1.34779 * 119.99495 * 84.99916 * 13 3 2 15 15 O 1.21566 * 120.00035 * 0.02562 * 14 13 3 16 16 C 1.47704 * 119.99602 * 180.02562 * 14 13 3 17 17 C 1.39638 * 120.13706 * 359.97438 * 16 14 13 18 18 C 1.38336 * 119.84549 * 180.02562 * 17 16 14 19 19 O 1.35954 * 119.94489 * 180.02562 * 18 17 16 20 20 C 1.42897 * 117.00220 * 180.02562 * 19 18 17 21 21 C 1.38887 * 120.11656 * 359.97438 * 18 17 16 22 22 C 1.38248 * 120.27159 * 0.02562 * 21 18 17 23 23 Cl 1.73607 * 119.92256 * 179.97438 * 22 21 18 24 24 C 1.38433 * 120.15721 * 0.02562 * 22 21 18 25 25 F 1.35093 * 120.06161 * 180.27224 * 24 22 21 26 26 H 1.09003 * 109.47041 * 299.99656 * 1 2 3 27 27 H 1.09001 * 109.47195 * 59.99854 * 1 2 3 28 28 H 1.08998 * 109.47295 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.47041 * 240.00344 * 2 1 3 30 30 H 1.09001 * 109.47195 * 120.00146 * 2 1 3 31 31 H 0.97001 * 119.99788 * 179.97438 * 8 7 5 32 32 H 0.96998 * 120.00336 * 265.00691 * 13 3 2 33 33 H 1.08002 * 120.07746 * 359.97438 * 17 16 14 34 34 H 1.09001 * 109.47364 * 180.02562 * 20 19 18 35 35 H 1.09006 * 109.46830 * 299.99728 * 20 19 18 36 36 H 1.09000 * 109.47384 * 59.99714 * 20 19 18 37 37 H 1.08003 * 119.86590 * 179.97438 * 21 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9815 0.8419 5 6 3.5420 1.4443 0.1238 6 1 4.1472 1.8889 -0.6523 7 6 4.1433 0.8783 1.2279 8 7 3.4062 0.3373 2.1732 9 14 6.0049 0.8812 1.3817 10 1 6.4995 2.2814 1.3821 11 1 6.3979 0.2176 2.6508 12 1 6.5975 0.1473 0.2347 13 7 1.6524 2.0975 -1.2518 14 6 0.4351 2.6644 -1.3669 15 8 -0.3411 2.6325 -0.4318 16 6 0.0441 3.3243 -2.6291 17 6 0.9337 3.3630 -3.7048 18 6 0.5615 3.9832 -4.8840 19 8 1.4258 4.0216 -5.9327 20 6 0.9769 4.6784 -7.1197 21 6 -0.6940 4.5657 -4.9989 22 6 -1.5786 4.5302 -3.9370 23 17 -3.1454 5.2619 -4.0902 24 6 -1.2174 3.9136 -2.7514 25 9 -2.0853 3.8752 -1.7168 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 1.8934 -0.5138 -0.8900 30 1 1.8934 -0.5139 0.8900 31 1 3.8293 -0.0613 2.9498 32 1 2.2719 2.1232 -1.9978 33 1 1.9104 2.9106 -3.6160 34 1 1.7603 4.6369 -7.8765 35 1 0.0831 4.1797 -7.4950 36 1 0.7445 5.7190 -6.8935 37 1 -0.9803 5.0492 -5.9213 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000412253536.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:38:23 Heat of formation + Delta-G solvation = -99.420346 kcal Electronic energy + Delta-G solvation = -24076.791555 eV Core-core repulsion = 20181.145875 eV Total energy + Delta-G solvation = -3895.645680 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 315.082 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -48.72973 -40.52538 -39.11955 -37.55765 -36.47814 -35.08836 -32.66043 -31.66397 -30.53333 -30.05341 -27.62801 -26.94844 -24.21919 -23.18459 -22.48557 -20.66221 -19.46550 -18.77622 -17.45344 -17.31931 -16.91685 -16.23064 -15.77158 -15.57756 -15.32594 -15.14792 -14.71431 -14.43586 -14.28112 -13.64035 -13.23925 -13.11175 -12.96161 -12.70115 -12.46521 -12.27940 -12.04649 -11.56636 -11.48199 -11.31472 -11.24577 -11.01567 -10.87027 -10.79773 -10.34885 -10.20359 -9.65371 -9.26035 -9.23255 -9.07759 -8.51923 -8.37566 -7.89958 -6.13740 -4.23719 0.45195 0.81622 1.68600 2.84315 2.84682 3.25325 3.30915 3.31664 3.73811 3.83675 4.03603 4.33396 4.42858 4.57759 4.68035 4.80169 4.84551 5.09073 5.17608 5.21158 5.28786 5.54431 5.75956 5.79992 6.21881 6.39379 6.45763 6.65247 6.91575 7.03236 7.17980 7.30946 7.37944 7.58882 7.68664 7.86616 8.15000 8.54626 8.72243 8.99236 9.43173 10.91551 Molecular weight = 315.08amu Principal moments of inertia in cm(-1) A = 0.016698 B = 0.003837 C = 0.003285 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1676.474873 B = 7295.004025 C = 8522.513576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.128 4.128 3 C 0.270 3.730 4 H 0.053 0.947 5 C -0.537 4.537 6 H 0.062 0.938 7 C 0.068 3.932 8 N -0.881 5.881 9 Si 0.902 3.098 10 H -0.276 1.276 11 H -0.286 1.286 12 H -0.276 1.276 13 N -0.695 5.695 14 C 0.542 3.458 15 O -0.523 6.523 16 C -0.107 4.107 17 C -0.088 4.088 18 C 0.123 3.877 19 O -0.306 6.306 20 C 0.023 3.977 21 C -0.160 4.160 22 C -0.047 4.047 23 Cl -0.044 7.044 24 C 0.129 3.871 25 F -0.101 7.101 26 H 0.051 0.949 27 H 0.037 0.963 28 H 0.024 0.976 29 H 0.032 0.968 30 H 0.101 0.899 31 H 0.266 0.734 32 H 0.389 0.611 33 H 0.154 0.846 34 H 0.104 0.896 35 H 0.058 0.942 36 H 0.058 0.942 37 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.627 8.172 -18.304 21.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.166 4.166 3 C 0.169 3.831 4 H 0.070 0.930 5 C -0.575 4.575 6 H 0.080 0.920 7 C -0.135 4.135 8 N -0.518 5.518 9 Si 0.729 3.271 10 H -0.202 1.202 11 H -0.211 1.211 12 H -0.201 1.201 13 N -0.343 5.343 14 C 0.325 3.675 15 O -0.401 6.401 16 C -0.112 4.112 17 C -0.107 4.107 18 C 0.077 3.923 19 O -0.219 6.219 20 C -0.072 4.072 21 C -0.180 4.180 22 C -0.075 4.075 23 Cl -0.015 7.015 24 C 0.107 3.893 25 F -0.079 7.079 26 H 0.070 0.930 27 H 0.056 0.944 28 H 0.043 0.957 29 H 0.051 0.949 30 H 0.119 0.881 31 H 0.076 0.924 32 H 0.222 0.778 33 H 0.172 0.828 34 H 0.122 0.878 35 H 0.076 0.924 36 H 0.077 0.923 37 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -7.121 8.008 -17.383 20.421 hybrid contribution 0.775 0.226 -0.369 0.888 sum -6.346 8.235 -17.752 20.572 Atomic orbital electron populations 1.21853 0.98281 0.98202 1.01269 1.21947 0.92644 0.99590 1.02454 1.18882 0.94401 0.89274 0.80531 0.92952 1.21168 0.90492 1.39378 1.06469 0.92033 1.24872 0.98642 0.94717 0.95315 1.69884 1.35270 1.37353 1.09310 0.86504 0.84765 0.78338 0.77475 1.20163 1.21128 1.20126 1.46469 1.13872 1.55129 1.18869 1.17695 0.83687 0.80108 0.85978 1.90838 1.51120 1.59123 1.38995 1.20281 0.92889 1.01273 0.96709 1.20646 1.00815 0.99755 0.89511 1.18608 0.88596 0.96549 0.88556 1.86160 1.40206 1.74057 1.21479 1.23155 1.01905 0.96865 0.85266 1.21044 0.93029 1.04464 0.99456 1.20548 0.89849 1.02592 0.94524 1.98389 1.24268 1.81037 1.97852 1.17235 0.88110 0.99548 0.84358 1.91632 1.67003 1.93838 1.55449 0.93013 0.94405 0.95708 0.94896 0.88103 0.92440 0.77758 0.82842 0.87756 0.92357 0.92339 0.83314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.11 8.51 37.16 0.32 -2.79 16 2 C -0.13 -3.06 5.45 -26.73 -0.15 -3.21 16 3 C 0.27 6.68 2.24 -69.08 -0.15 6.52 16 4 H 0.05 1.50 7.58 -51.93 -0.39 1.11 16 5 C -0.54 -13.84 8.73 -34.44 -0.30 -14.15 16 6 H 0.06 1.51 7.74 -52.49 -0.41 1.10 16 7 C 0.07 1.79 5.29 -17.82 -0.09 1.70 16 8 N -0.88 -24.32 11.29 55.43 0.63 -23.70 16 9 Si 0.90 20.27 29.54 -169.99 -5.02 15.25 16 10 H -0.28 -6.18 7.11 56.52 0.40 -5.78 16 11 H -0.29 -6.43 7.11 56.52 0.40 -6.03 16 12 H -0.28 -6.08 7.11 56.52 0.40 -5.68 16 13 N -0.70 -14.17 4.97 -55.92 -0.28 -14.44 16 14 C 0.54 10.95 6.34 -12.39 -0.08 10.87 16 15 O -0.52 -12.41 12.47 5.31 0.07 -12.34 16 16 C -0.11 -1.73 5.88 -104.93 -0.62 -2.34 16 17 C -0.09 -1.14 9.47 -39.02 -0.37 -1.51 16 18 C 0.12 1.38 6.68 -39.31 -0.26 1.11 16 19 O -0.31 -3.01 10.49 -19.59 -0.21 -3.22 16 20 C 0.02 0.13 9.81 101.05 0.99 1.12 16 21 C -0.16 -1.65 8.81 -39.34 -0.35 -2.00 16 22 C -0.05 -0.60 6.32 -39.51 -0.25 -0.85 16 23 Cl -0.04 -0.51 28.61 -51.86 -1.48 -1.99 16 24 C 0.13 2.05 7.26 -38.94 -0.28 1.76 16 25 F -0.10 -1.85 15.10 2.25 0.03 -1.82 16 26 H 0.05 1.24 7.84 -51.93 -0.41 0.83 16 27 H 0.04 0.83 5.65 -51.93 -0.29 0.54 16 28 H 0.02 0.49 8.14 -51.93 -0.42 0.07 16 29 H 0.03 0.75 8.14 -51.93 -0.42 0.33 16 30 H 0.10 2.67 5.95 -51.93 -0.31 2.36 16 31 H 0.27 7.00 8.31 -40.82 -0.34 6.66 16 32 H 0.39 6.76 6.57 -40.82 -0.27 6.49 16 33 H 0.15 1.80 6.40 -52.49 -0.34 1.47 16 34 H 0.10 0.40 8.14 -51.93 -0.42 -0.02 16 35 H 0.06 0.27 7.65 -51.93 -0.40 -0.13 16 36 H 0.06 0.27 7.66 -51.93 -0.40 -0.13 16 37 H 0.15 1.08 6.27 -52.48 -0.33 0.75 16 LS Contribution 326.62 15.07 4.92 4.92 Total: -1.00 -30.30 326.62 -6.87 -37.17 By element: Atomic # 1 Polarization: 7.87 SS G_CDS: -3.94 Total: 3.93 kcal Atomic # 6 Polarization: -2.17 SS G_CDS: -1.59 Total: -3.77 kcal Atomic # 7 Polarization: -38.49 SS G_CDS: 0.35 Total: -38.14 kcal Atomic # 8 Polarization: -15.42 SS G_CDS: -0.14 Total: -15.56 kcal Atomic # 9 Polarization: -1.85 SS G_CDS: 0.03 Total: -1.82 kcal Atomic # 14 Polarization: 20.27 SS G_CDS: -5.02 Total: 15.25 kcal Atomic # 17 Polarization: -0.51 SS G_CDS: -1.48 Total: -1.99 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -30.30 -6.87 -37.17 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000412253536.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.246 kcal (2) G-P(sol) polarization free energy of solvation -30.300 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.547 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.874 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.174 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.420 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds